Bug#837914: esys-particle: FTBFS due to test failures

Bas Couwenberg sebastic at xs4all.nl
Thu Sep 15 11:34:00 UTC 2016


Source: esys-particle
Version: 2.3.4+dfsg1-2
Severity: serious
Justification: makes the package in question unusable or mostly so
Control: block 836917 by -1

Dear Maintainer,


The upload of openmpi (2.0.1-3) to unstable has triggered an
uncoordinated transition (#836917). Unfortunately your package FTBFS due
to test failures:

 cd /«BUILDDIR»/esys-particle-2.3.4+dfsg1/debian/test; mpirun --allow-run-as-root -np 3 /«BUILDDIR»/esys-particle-2.3.4+dfsg1/debian/esys-particle/usr/bin/esysparticle compression.py; cat nbons.dat; cat ekin.dat; cat epot.dat
 [babin:06791] PMIX ERROR: INVALID-CREDENTIAL in file src/server/pmix_server_listener.c at line 540
 [babin:06796] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c at line 983
 [babin:06796] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c at line 199
 *** An error occurred in MPI_Init
 *** on a NULL communicator
 *** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
 ***    and potentially your MPI job)
 [babin:6796] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!
 --------------------------------------------------------------------------
 It looks like MPI_INIT failed for some reason; your parallel process is
 likely to abort.  There are many reasons that a parallel process can
 fail during MPI_INIT; some of which are due to configuration or environment
 problems.  This failure appears to be an internal failure; here's some
 additional information (which may only be relevant to an Open MPI
 developer):

   ompi_mpi_init: ompi_rte_init failed
   --> Returned "(null)" (-43) instead of "Success" (0)
 --------------------------------------------------------------------------
 -------------------------------------------------------
 Primary job  terminated normally, but 1 process returned
 a non-zero exit code.. Per user-direction, the job has been aborted.
 -------------------------------------------------------
 --------------------------------------------------------------------------
 mpirun detected that one or more processes exited with non-zero status, thus causing
 the job to be terminated. The first process to do so was:

   Process name: [[38239,1],0]
   Exit code:    1
 --------------------------------------------------------------------------
 cat: nbons.dat: No such file or directory
 cat: ekin.dat: No such file or directory
 cat: epot.dat: No such file or directory

Kind Regards,

Bas



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