Bug#837914: esys-particle: FTBFS due to test failures
Bas Couwenberg
sebastic at xs4all.nl
Thu Sep 15 11:34:00 UTC 2016
Source: esys-particle
Version: 2.3.4+dfsg1-2
Severity: serious
Justification: makes the package in question unusable or mostly so
Control: block 836917 by -1
Dear Maintainer,
The upload of openmpi (2.0.1-3) to unstable has triggered an
uncoordinated transition (#836917). Unfortunately your package FTBFS due
to test failures:
cd /«BUILDDIR»/esys-particle-2.3.4+dfsg1/debian/test; mpirun --allow-run-as-root -np 3 /«BUILDDIR»/esys-particle-2.3.4+dfsg1/debian/esys-particle/usr/bin/esysparticle compression.py; cat nbons.dat; cat ekin.dat; cat epot.dat
[babin:06791] PMIX ERROR: INVALID-CREDENTIAL in file src/server/pmix_server_listener.c at line 540
[babin:06796] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c at line 983
[babin:06796] PMIX ERROR: UNREACHABLE in file src/client/pmix_client.c at line 199
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
*** and potentially your MPI job)
[babin:6796] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems. This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):
ompi_mpi_init: ompi_rte_init failed
--> Returned "(null)" (-43) instead of "Success" (0)
--------------------------------------------------------------------------
-------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code.. Per user-direction, the job has been aborted.
-------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:
Process name: [[38239,1],0]
Exit code: 1
--------------------------------------------------------------------------
cat: nbons.dat: No such file or directory
cat: ekin.dat: No such file or directory
cat: epot.dat: No such file or directory
Kind Regards,
Bas
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