Bug#902553: New version does not build

[Andreas Tille]

Hi Ghislain,

since one of the Debian Med packages seems to be affected I tried to
upgrade h5py (see Git repository).  Unfortunately it does not build:

...
running build_ext
Traceback (most recent call last):
  File "setup.py", line 168, in <module>
    cmdclass = CMDCLASS,
  File "/usr/lib/python2.7/dist-packages/setuptools/__init__.py", line 129, in setup
    return distutils.core.setup(**attrs)
  File "/usr/lib/python2.7/distutils/core.py", line 151, in setup
    dist.run_commands()
  File "/usr/lib/python2.7/distutils/dist.py", line 953, in run_commands
    self.run_command(cmd)
  File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
    cmd_obj.run()
  File "/usr/lib/python2.7/distutils/command/build.py", line 128, in run
    self.run_command(cmd_name)
  File "/usr/lib/python2.7/distutils/cmd.py", line 326, in run_command
    self.distribution.run_command(command)
  File "/usr/lib/python2.7/distutils/dist.py", line 972, in run_command
    cmd_obj.run()
  File "/build/h5py-2.8.0/setup_build.py", line 156, in run
    from Cython.Build import cythonize
  File "/usr/lib/python2.7/dist-packages/Cython/Build/__init__.py", line 1, in <module>
    from .Dependencies import cythonize
  File "/usr/lib/python2.7/dist-packages/Cython/Build/Dependencies.py", line 36, in <module>
    from ..Compiler.Main import Context, CompilationOptions, default_options
  File "/usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py", line 30, in <module>
    from .Symtab import ModuleScope
  File "/usr/lib/python2.7/dist-packages/Cython/Compiler/Symtab.py", line 19, in <module>
    from . import PyrexTypes
  File "/usr/lib/python2.7/dist-packages/Cython/Compiler/PyrexTypes.py", line 17, in <module>
    from .Code import UtilityCode, LazyUtilityCode, TempitaUtilityCode
  File "Cython/Compiler/Code.py", line 38, in init Cython.Compiler.Code
ImportError: /usr/lib/python2.7/dist-packages/Cython/StringIOTree.x86_64-linux-gnu.so: undefined symbol: Py_InitModule4_64
E: pybuild pybuild:336: build: plugin distutils failed with: exit code=1: /usr/bin/python-dbg setup.py build 
dh_auto_build: pybuild --build -i python{version}-dbg -p 2.7 returned exit code 13
make[1]: *** [debian/rules:22: override_dh_auto_build] Error 25
make[1]: Leaving directory '/build/h5py-2.8.0'
make: *** [debian/rules:10: build] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2


Can you please have a look?

Kind regards

        Andreas.

-- 
http://fam-tille.de