Bug#897506: caffe: FTBFS: pdftex fails
Lucas Nussbaum
lucas at debian.org
Wed May 2 21:41:36 BST 2018
Source: caffe
Version: 1.0.0-6
Severity: serious
Tags: buster sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20180502 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part (hopefully):
> make[2]: Entering directory '/<<PKGBUILDDIR>>/doxygen/latex'
> rm -f *.ps *.dvi *.aux *.toc *.idx *.ind *.ilg *.log *.out *.brf *.blg *.bbl refman.pdf
> pdflatex refman
> This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
> entering extended mode
> (./refman.tex
> LaTeX2e <2018-04-01> patch level 2
> Babel <3.18> and hyphenation patterns for 3 language(s) loaded.
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
> Document Class: book 2014/09/29 v1.4h Standard LaTeX document class
> (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
> (/usr/share/texlive/texmf-dist/tex/latex/base/fixltx2e.sty
>
> Package fixltx2e Warning: fixltx2e is not required with releases after 2015
> (fixltx2e) All fixes are now in the LaTeX kernel.
> (fixltx2e) See the latexrelease package for details.
>
> ) (/usr/share/texlive/texmf-dist/tex/latex/tools/calc.sty) (./doxygen.sty
> (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)
> (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tabu/tabu.sty
> (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/tabularx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/multirow/multirow.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjustbox.sty
> (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty
> (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex
> (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex
> (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex))))
> (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/adjcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/trimclip.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)))
> (/usr/share/texlive/texmf-dist/tex/latex/collectbox/collectbox.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/adjustbox/tc-pdftex.def))
> (/usr/share/texlive/texmf-dist/tex/latex/ifoddpage/ifoddpage.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty
> (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.def
> (/usr/share/texlive/texmf-dist/tex/latex/base/ts1enc.dfu)))
> (/usr/share/texlive/texmf-dist/tex/latex/wasysym/wasysym.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty
> (/usr/share/texlive/texmf-dist/tex/latex/base/t1enc.def))
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/helvet.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/courier.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/sectsty/sectsty.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifpdf.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/ifvtex.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/ifxetex/ifxetex.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tocloft/tocloft.sty)
> Writing index file refman.idx
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xr.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/auxhook.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/kvoptions.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/hyperref.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/backref.sty
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
> (/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty
> (/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/caption/ltcaption.sty))
> No file refman.aux.
> (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)
> (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
> [Loading MPS to PDF converter (version 2006.09.02).]
> ) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/grfext.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
> *geometry* driver: auto-detecting
> *geometry* detected driver: pdftex
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty))
> [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [1] [2]
> Chapter 1.
> (./namespaces.tex (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
>
> LaTeX Warning: Reference `namespaceboost' on page 1 undefined on input line 3.
>
>
> LaTeX Warning: Reference `namespacecaffe' on page 1 undefined on input line 4.
>
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)
>
> LaTeX Warning: Reference `namespacecaffe_1_1SolverAction' on page 1 undefined o
> n input line 5.
>
> ) [1] [2]
> Chapter 2.
> (./hierarchy.tex
>
> LaTeX Warning: Reference `classcaffe_1_1Batch' on page 3 undefined on input lin
> e 3.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Blob' on page 3 undefined on input line
> 4.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Blob' on page 3 undefined on input line
> 5.
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>
> LaTeX Warning: Reference `classcaffe_1_1Blob' on page 3 undefined on input line
> 6.
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>
> LaTeX Warning: Reference `classcaffe_1_1BlockingQueue' on page 3 undefined on i
> nput line 7.
>
>
> LaTeX Warning: Reference `classcaffe_1_1BlockingQueue' on page 3 undefined on i
> nput line 8.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Caffe' on page 3 undefined on input lin
> e 9.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Net_1_1Callback' on page 3 undefined on
> input line 10.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Solver_1_1Callback' on page 3 undefined
> on input line 11.
>
>
> LaTeX Warning: Reference `classcaffe_1_1db_1_1Cursor' on page 3 undefined on in
> put line 12.
>
>
> LaTeX Warning: Reference `classcaffe_1_1DataTransformer' on page 3 undefined on
> input line 13.
>
>
> LaTeX Warning: Reference `classcaffe_1_1db_1_1DB' on page 3 undefined on input
> line 14.
>
>
> LaTeX Warning: Reference `classcaffe_1_1Filler' on page 3 undefined on input li
> ne 15.
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> LaTeX Warning: Reference `classcaffe_1_1BilinearFiller' on page 3 undefined on
> input line 17.
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> LaTeX Warning: Reference `classcaffe_1_1ConstantFiller' on page 3 undefined on
> input line 18.
>
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> LaTeX Warning: Reference `classcaffe_1_1GaussianFiller' on page 3 undefined on
> input line 19.
>
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> LaTeX Warning: Reference `classcaffe_1_1MSRAFiller' on page 3 undefined on inpu
> t line 20.
>
>
> LaTeX Warning: Reference `classcaffe_1_1PositiveUnitballFiller' on page 3 undef
> ined on input line 21.
>
>
> LaTeX Warning: Reference `classcaffe_1_1UniformFiller' on page 3 undefined on i
> nput line 22.
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> LaTeX Warning: Reference `classcaffe_1_1XavierFiller' on page 3 undefined on in
> put line 23.
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> LaTeX Warning: Reference `classcaffe_1_1Caffe_1_1RNG_1_1Generator' on page 3 un
> defined on input line 25.
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> LaTeX Warning: Reference `classcaffe_1_1InternalThread' on page 3 undefined on
> input line 26.
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> LaTeX Warning: Reference `classcaffe_1_1BasePrefetchingDataLayer' on page 3 und
> efined on input line 28.
>
>
> LaTeX Warning: Reference `classcaffe_1_1DataLayer' on page 3 undefined on input
> line 30.
>
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> LaTeX Warning: Reference `classcaffe_1_1ImageDataLayer' on page 3 undefined on
> input line 31.
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> LaTeX Warning: Reference `classcaffe_1_1WindowDataLayer' on page 3 undefined on
> input line 32.
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> LaTeX Warning: Reference `classcaffe_1_1Layer' on page 3 undefined on input lin
> e 35.
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> LaTeX Warning: Reference `classcaffe_1_1AccuracyLayer' on page 3 undefined on i
> nput line 37.
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> LaTeX Warning: Reference `classcaffe_1_1ArgMaxLayer' on page 3 undefined on inp
> ut line 38.
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> LaTeX Warning: Reference `classcaffe_1_1BaseConvolutionLayer' on page 3 undefin
> ed on input line 39.
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> LaTeX Warning: Reference `classcaffe_1_1ConvolutionLayer' on page 3 undefined o
> n input line 41.
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> LaTeX Warning: Reference `classcaffe_1_1DeconvolutionLayer' on page 3 undefined
> on input line 42.
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> LaTeX Warning: Reference `classcaffe_1_1BaseDataLayer' on page 3 undefined on i
> nput line 44.
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> LaTeX Warning: Reference `classcaffe_1_1BasePrefetchingDataLayer' on page 3 und
> efined on input line 46.
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> LaTeX Warning: Reference `classcaffe_1_1MemoryDataLayer' on page 3 undefined on
> input line 47.
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> LaTeX Warning: Reference `classcaffe_1_1BatchNormLayer' on page 3 undefined on
> input line 49.
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> LaTeX Warning: Reference `classcaffe_1_1BatchReindexLayer' on page 3 undefined
> on input line 50.
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> LaTeX Warning: Reference `classcaffe_1_1BiasLayer' on page 3 undefined on input
> line 51.
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> LaTeX Warning: Reference `classcaffe_1_1ConcatLayer' on page 3 undefined on inp
> ut line 52.
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> [3]
>
> LaTeX Warning: Reference `classcaffe_1_1CropLayer' on page 4 undefined on input
> line 53.
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> LaTeX Warning: Reference `classcaffe_1_1DummyDataLayer' on page 4 undefined on
> input line 54.
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> LaTeX Warning: Reference `classcaffe_1_1EltwiseLayer' on page 4 undefined on in
> put line 55.
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> LaTeX Warning: Reference `classcaffe_1_1EmbedLayer' on page 4 undefined on inpu
> t line 56.
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> LaTeX Warning: Reference `classcaffe_1_1FilterLayer' on page 4 undefined on inp
> ut line 57.
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> LaTeX Warning: Reference `classcaffe_1_1FlattenLayer' on page 4 undefined on in
> put line 58.
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> LaTeX Warning: Reference `classcaffe_1_1HDF5DataLayer' on page 4 undefined on i
> nput line 59.
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> LaTeX Warning: Reference `classcaffe_1_1HDF5OutputLayer' on page 4 undefined on
> input line 60.
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> LaTeX Warning: Reference `classcaffe_1_1Im2colLayer' on page 4 undefined on inp
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> LaTeX Warning: Reference `classcaffe_1_1InnerProductLayer' on page 4 undefined
> on input line 62.
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> LaTeX Warning: Reference `classcaffe_1_1InputLayer' on page 4 undefined on inpu
> t line 63.
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> LaTeX Warning: Reference `classcaffe_1_1LossLayer' on page 4 undefined on input
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> LaTeX Warning: Reference `classcaffe_1_1ContrastiveLossLayer' on page 4 undefin
> ed on input line 66.
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> LaTeX Warning: Reference `classcaffe_1_1EuclideanLossLayer' on page 4 undefined
> on input line 67.
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> LaTeX Warning: Reference `classcaffe_1_1HingeLossLayer' on page 4 undefined on
> input line 68.
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> LaTeX Warning: Reference `classcaffe_1_1InfogainLossLayer' on page 4 undefined
> on input line 69.
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> LaTeX Warning: Reference `classcaffe_1_1MultinomialLogisticLossLayer' on page 4
> undefined on input line 70.
>
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> LaTeX Warning: Reference `classcaffe_1_1SigmoidCrossEntropyLossLayer' on page 4
> undefined on input line 71.
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> LaTeX Warning: Reference `classcaffe_1_1SoftmaxWithLossLayer' on page 4 undefin
> ed on input line 72.
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> LaTeX Warning: Reference `classcaffe_1_1LRNLayer' on page 4 undefined on input
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> LaTeX Warning: Reference `classcaffe_1_1LSTMUnitLayer' on page 4 undefined on i
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> LaTeX Warning: Reference `classcaffe_1_1MVNLayer' on page 4 undefined on input
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> LaTeX Warning: Reference `classcaffe_1_1NeuronLayer' on page 4 undefined on inp
> ut line 77.
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> LaTeX Warning: Reference `classcaffe_1_1AbsValLayer' on page 4 undefined on inp
> ut line 79.
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> LaTeX Warning: Reference `classcaffe_1_1BNLLLayer' on page 4 undefined on input
> line 80.
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> LaTeX Warning: Reference `classcaffe_1_1DropoutLayer' on page 4 undefined on in
> put line 81.
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> LaTeX Warning: Reference `classcaffe_1_1ELULayer' on page 4 undefined on input
> line 82.
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> LaTeX Warning: Reference `classcaffe_1_1ExpLayer' on page 4 undefined on input
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> LaTeX Warning: Reference `classcaffe_1_1LogLayer' on page 4 undefined on input
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> LaTeX Warning: Reference `classcaffe_1_1PowerLayer' on page 4 undefined on inpu
> t line 85.
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> LaTeX Warning: Reference `classcaffe_1_1PReLULayer' on page 4 undefined on inpu
> t line 86.
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> LaTeX Warning: Reference `classcaffe_1_1ReLULayer' on page 4 undefined on input
> line 87.
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> LaTeX Warning: Reference `classcaffe_1_1SigmoidLayer' on page 4 undefined on in
> put line 88.
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> LaTeX Warning: Reference `classcaffe_1_1TanHLayer' on page 4 undefined on input
> line 89.
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> LaTeX Warning: Reference `classcaffe_1_1ThresholdLayer' on page 4 undefined on
> input line 90.
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> LaTeX Warning: Reference `classcaffe_1_1ParameterLayer' on page 4 undefined on
> input line 92.
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> LaTeX Warning: Reference `classcaffe_1_1PoolingLayer' on page 4 undefined on in
> put line 93.
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> LaTeX Warning: Reference `classcaffe_1_1PythonLayer' on page 4 undefined on inp
> ut line 94.
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> LaTeX Warning: Reference `classcaffe_1_1RecurrentLayer' on page 4 undefined on
> input line 95.
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> input line 100.
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> t line 102.
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> put line 103.
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> t line 104.
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> put line 105.
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> 112.
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> [4]
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> e 130.
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> LaTeX Warning: Reference `classcaffe_1_1db_1_1Transaction' on page 5 undefined
> on input line 134.
>
> ) [5] [6]
> Chapter 3.
> (./annotated.tex
>
> LaTeX Warning: Reference `classcaffe_1_1AbsValLayer' on page 7 undefined on inp
> ut line 3.
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> LaTeX Warning: Reference `classcaffe_1_1AccuracyLayer' on page 7 undefined on i
> nput line 4.
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> LaTeX Warning: Reference `classcaffe_1_1AdaDeltaSolver' on page 7 undefined on
> input line 5.
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> LaTeX Warning: Reference `classcaffe_1_1AdaGradSolver' on page 7 undefined on i
> nput line 6.
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> LaTeX Warning: Reference `classcaffe_1_1AdamSolver' on page 7 undefined on inpu
> t line 7.
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> LaTeX Warning: Reference `classcaffe_1_1ArgMaxLayer' on page 7 undefined on inp
> ut line 8.
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> LaTeX Warning: Reference `classcaffe_1_1BaseConvolutionLayer' on page 7 undefin
> ed on input line 9.
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> Underfull \hbox (badness 1248) in paragraph at lines 9--9
> \T1/phv/m/n/10 Abstract base class that fac-tors out the B[]L[]AS code com-mon
> to [][]Convolution[]Layer[][] and
>
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> ! pdfTeX error (ext4): \pdfendlink ended up in different nesting level than \pd
> fstartlink.
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.414 \subsubsection
> {\texorpdfstring{loss\+\_\+}{loss\_}}
> ! ==> Fatal error occurred, no output PDF file produced!
> Transcript written on refman.log.
> make[2]: *** [Makefile:6: refman.pdf] Error 1
The full build log is available from:
http://aws-logs.debian.net/2018/05/02/caffe_1.0.0-6_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
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