Bug#911830: FTBFS on multiple architectures
Stuart Prescott
stuart at debian.org
Sat Nov 10 09:30:41 GMT 2018
Note that scikit-learn also FTBFS on amd64; log attached in case that helps
compare to a local log from the maintainer build, since it wasn't built on the
buildd.
--
Stuart Prescott http://www.nanonanonano.net/ stuart at nanonanonano.net
Debian Developer http://www.debian.org/ stuart at debian.org
GPG fingerprint 90E2 D2C1 AD14 6A1B 7EBB 891D BBC1 7EBB 1396 F2F7
-------------- next part --------------
sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on simurgh.nanonanonano.net
+==============================================================================+
| scikit-learn 0.20.0+dfsg-2 (amd64) Sat, 10 Nov 2018 09:16:46 +0000 |
+==============================================================================+
Package: scikit-learn
Version: 0.20.0+dfsg-2
Source Version: 0.20.0+dfsg-2
Distribution: unstable
Machine Architecture: amd64
Host Architecture: amd64
Build Architecture: amd64
Build Type: full
+------------------------------------------------------------------------------+
| Pre Build Commands |
+------------------------------------------------------------------------------+
/srv/static/programming/debian/local-repo/repotools/scan.sh
-----------------------------------------------------------
+ where=/srv/static/programming/debian/local-repo/
+ origin=local
+ label=repo
+ for release in stretch-backports sid
+ cd /srv/static/programming/debian/local-repo//stretch-backports
++ find . -newer Release
++ wc -l
+ '[' 0 -eq 0 ']'
+ exit
+ for release in stretch-backports sid
+ cd /srv/static/programming/debian/local-repo//sid
++ find . -newer Release
++ wc -l
+ '[' 0 -eq 0 ']'
+ exit
I: Finished running '/srv/static/programming/debian/local-repo/repotools/scan.sh'.
Finished processing commands.
--------------------------------------------------------------------------------
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-6e799c81-4f24-460b-ab64-252c2eb39d31' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Chroot Setup Commands |
+------------------------------------------------------------------------------+
/repo/repotools/prep.sh
-----------------------
I: Finished running '/repo/repotools/prep.sh'.
Finished processing commands.
--------------------------------------------------------------------------------
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 file:/repo/sid ./ InRelease
Ign:1 file:/repo/sid ./ InRelease
Get:2 file:/repo/sid ./ Release [2000 B]
Get:2 file:/repo/sid ./ Release [2000 B]
Get:3 file:/repo/sid ./ Release.gpg
Ign:3 file:/repo/sid ./ Release.gpg
Get:4 http://deb.debian.org/debian sid InRelease [233 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 Packages [8293 kB]
Fetched 8526 kB in 2s (3591 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Local sources
-------------
/tmp/pkgs/scikit-learn_0.20.0+dfsg-2.dsc exists in /tmp/pkgs; copying to chroot
I: NOTICE: Log filtering will replace 'build/scikit-learn-bYM5HW/scikit-learn-0.20.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/scikit-learn-bYM5HW' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-96s1nU/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Release [957 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Packages [431 B]
Fetched 1737 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
fakeroot libfakeroot
The following NEW packages will be installed:
fakeroot libfakeroot sbuild-build-depends-core-dummy
0 upgraded, 3 newly installed, 0 to remove and 0 not upgraded.
Need to get 133 kB of archives.
After this operation, 373 kB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B]
Get:2 http://deb.debian.org/debian sid/main amd64 libfakeroot amd64 1.23-1 [45.9 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 fakeroot amd64 1.23-1 [85.8 kB]
Fetched 133 kB in 0s (0 B/s)
Selecting previously unselected package libfakeroot:amd64.
(Reading database ... 16189 files and directories currently installed.)
Preparing to unpack .../libfakeroot_1.23-1_amd64.deb ...
Unpacking libfakeroot:amd64 (1.23-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../fakeroot_1.23-1_amd64.deb ...
Unpacking fakeroot (1.23-1) ...
Selecting previously unselected package sbuild-build-depends-core-dummy.
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8) ...
Setting up libfakeroot:amd64 (1.23-1) ...
Processing triggers for man-db (2.8.4-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up fakeroot (1.23-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (amd64 included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 9~), dh-python, python-all-dev (>= 2.6.6-3~), python-setuptools, python-numpy (>= 1:1.8.2~), python-scipy, python-nose, python-pytest, python-matplotlib, python-joblib (>= 0.9.2), python3-all-dev, cython3, python3-setuptools, python3-numpy, python3-scipy, python3-nose, python3-pytest, python3-matplotlib, python3-joblib (>= 0.9.2), libsvm-dev (>= 2.84.0), libblas-dev | libblas.so, libatlas-base-dev, python-pandas, python3-pandas, python-pil, python3-pil, python3-sphinx (>= 1.0), python3-sphinx-gallery, python3-numpydoc, python3-pandas, python3-skimage, python3-pil, librsvg2-bin, graphviz, python3-doc, python-numpy-doc, python-scipy-doc, python-matplotlib-doc
Filtered Build-Depends: debhelper (>= 9~), dh-python, python-all-dev (>= 2.6.6-3~), python-setuptools, python-numpy (>= 1:1.8.2~), python-scipy, python-nose, python-pytest, python-matplotlib, python-joblib (>= 0.9.2), python3-all-dev, cython3, python3-setuptools, python3-numpy, python3-scipy, python3-nose, python3-pytest, python3-matplotlib, python3-joblib (>= 0.9.2), libsvm-dev (>= 2.84.0), libblas-dev, libatlas-base-dev, python-pandas, python3-pandas, python-pil, python3-pil, python3-sphinx (>= 1.0), python3-sphinx-gallery, python3-numpydoc, python3-pandas, python3-skimage, python3-pil, librsvg2-bin, graphviz, python3-doc, python-numpy-doc, python-scipy-doc, python-matplotlib-doc
dpkg-deb: building package 'sbuild-build-depends-scikit-learn-dummy' in '/<<BUILDDIR>>/resolver-96s1nU/apt_archive/sbuild-build-depends-scikit-learn-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-scikit-learn-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
Ign:1 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Release [963 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Sources [742 B]
Get:5 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ Packages [796 B]
Fetched 2501 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install scikit-learn build dependencies (apt-based resolver)
------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
adwaita-icon-theme autoconf automake autopoint autotools-dev ca-certificates
cython3 dbus dbus-user-session dconf-gsettings-backend dconf-service
debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common
dwz file fontconfig fontconfig-config fonts-lyx fonts-mathjax gettext
gettext-base glib-networking glib-networking-common glib-networking-services
graphviz gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme
intltool-debian libarchive-zip-perl libatk-bridge2.0-0 libatk1.0-0
libatk1.0-data libatlas-base-dev libatlas3-base libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3
libcairo-gobject2 libcairo2 libcdt5 libcgraph6 libcolord2 libcroco3 libcups2
libdatrie1 libdconf1 libepoxy0 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
libgraphite2-3 libgtk-3-0 libgtk-3-common libgts-0.7-5 libgvc6 libgvpr2
libharfbuzz0b libice6 libicu-le-hb0 libicu60 libjbig0 libjpeg62-turbo
libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore
libjson-glib-1.0-0 libjson-glib-1.0-common liblab-gamut1 liblapack3
liblcms2-2 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpam-systemd
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4
libpixman-1-0 libpng16-16 libproxy1v5 libpython-all-dev libpython-dev
libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.6 libpython3.6-dev
libpython3.6-minimal libpython3.6-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librsvg2-2
librsvg2-bin librsvg2-common libsigsegv2 libsm6 libsoup-gnome2.4-1
libsoup2.4-1 libsvm-dev libsvm3 libthai-data libthai0 libtiff5 libtool
libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0
libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6
libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxmu6 libxpm4
libxrandr2 libxrender1 libxt6 m4 mime-support openssl po-debconf python
python-all python-all-dev python-atomicwrites python-attr
python-babel-localedata python-backports.functools-lru-cache python-cycler
python-dateutil python-decorator python-dev python-funcsigs python-joblib
python-kiwisolver python-matplotlib python-matplotlib-data
python-matplotlib-doc python-minimal python-more-itertools python-nose
python-numpy python-numpy-doc python-pandas python-pandas-lib python-pil
python-pkg-resources python-pluggy python-py python-pyparsing python-pytest
python-scipy python-scipy-doc python-setuptools python-six
python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-alabaster python3-all
python3-all-dev python3-atomicwrites python3-attr python3-babel
python3-certifi python3-chardet python3-cloudpickle python3-cycler
python3-dateutil python3-decorator python3-dev python3-distutils python3-doc
python3-docutils python3-idna python3-imagesize python3-jinja2
python3-joblib python3-kiwisolver python3-lib2to3 python3-markupsafe
python3-matplotlib python3-minimal python3-more-itertools python3-networkx
python3-nose python3-numpy python3-numpydoc python3-packaging python3-pandas
python3-pandas-lib python3-pil python3-pkg-resources python3-pluggy
python3-py python3-pygments python3-pyparsing python3-pytest python3-pywt
python3-requests python3-roman python3-scipy python3-setuptools python3-six
python3-skimage python3-skimage-lib python3-sphinx python3-sphinx-gallery
python3-tz python3-urllib3 python3.6 python3.6-dev python3.6-doc
python3.6-minimal python3.7 python3.7-dev python3.7-minimal sgml-base
shared-mime-info sphinx-common ttf-bitstream-vera ucf x11-common xkb-data
xml-core
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cython-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev gsfonts graphviz-doc libatlas-doc
liblapack-doc colord cups-common libgd-tools gvfs libjs-jquery-ui-docs
fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblcms2-utils libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc libmail-box-perl python-doc
python-tk python-attr-doc python-cycler-doc python-funcsigs-doc dvipng
ffmpeg gir1.2-gtk-3.0 ghostscript inkscape ipython python-cairocffi
python-configobj python-excelerator python-gobject python-qt4 python-sip
python-tornado python-traits python-wxgtk3.0 texlive-extra-utils
texlive-latex-extra ttf-staypuft python-coverage python-nose-doc gfortran
python-numpy-dbg python-pandas-doc python-pil-doc python-pil-dbg subversion
python-pytest-xdist python-pyparsing-doc python-mock python-setuptools-doc
python2-doc python2.7-doc binfmt-support python3-tk python3-venv
python3-examples docutils-doc fonts-linuxlibertine | ttf-linux-libertine
texlive-lang-french texlive-latex-base texlive-latex-recommended
python-jinja2-doc ipython3 python3-cairocffi python3-gi python3-gi-cairo
python3-gobject python3-pyqt4 python3-sip python3-tornado
python-networkx-doc python3-numpy-dbg python3-pil-dbg python-pygments-doc
python3-cryptography python3-openssl python3-socks python-skimage-doc
imagemagick-6.q16 latexmk python3-sphinx-rtd-theme python3-stemmer
sphinx-doc texlive-fonts-recommended texlive-generic-extra
python-sphinx-gallery-doc python3-seaborn python3.6-venv python3.7-venv
python3.7-doc sgml-base-doc
Recommended packages:
fonts-liberation at-spi2-core libarchive-cpio-perl libgdk-pixbuf2.0-bin
libglib2.0-data xdg-user-dirs libgtk-3-bin libgts-bin javascript-common
libltdl-dev libmail-sendmail-perl python-simplejson python-lz4 python-psutil
python-tk python-tables python-numexpr python-xlrd python-statsmodels
python-openpyxl python-xlwt python-bs4 python-html5lib python-lxml
python-olefile libpaper-utils python3-simplejson python3-psutil python3-tk
python3-gdal python3-yaml python3-numexpr python3-tables python3-bs4
python3-html5lib python3-lxml python3-olefile python3-dask
The following NEW packages will be installed:
adwaita-icon-theme autoconf automake autopoint autotools-dev ca-certificates
cython3 dbus dbus-user-session dconf-gsettings-backend dconf-service
debhelper dh-autoreconf dh-python dh-strip-nondeterminism docutils-common
dwz file fontconfig fontconfig-config fonts-lyx fonts-mathjax gettext
gettext-base glib-networking glib-networking-common glib-networking-services
graphviz gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme
intltool-debian libarchive-zip-perl libatk-bridge2.0-0 libatk1.0-0
libatk1.0-data libatlas-base-dev libatlas3-base libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3 libblas-dev libblas3
libcairo-gobject2 libcairo2 libcdt5 libcgraph6 libcolord2 libcroco3 libcups2
libdatrie1 libdconf1 libepoxy0 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgd3 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
libgraphite2-3 libgtk-3-0 libgtk-3-common libgts-0.7-5 libgvc6 libgvpr2
libharfbuzz0b libice6 libicu-le-hb0 libicu60 libjbig0 libjpeg62-turbo
libjs-jquery libjs-jquery-ui libjs-mathjax libjs-sphinxdoc libjs-underscore
libjson-glib-1.0-0 libjson-glib-1.0-common liblab-gamut1 liblapack3
liblcms2-2 libltdl7 libmagic-mgc libmagic1 libmpdec2 libpam-systemd
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4
libpixman-1-0 libpng16-16 libproxy1v5 libpython-all-dev libpython-dev
libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.6 libpython3.6-dev
libpython3.6-minimal libpython3.6-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib librest-0.7-0 librsvg2-2
librsvg2-bin librsvg2-common libsigsegv2 libsm6 libsoup-gnome2.4-1
libsoup2.4-1 libsvm-dev libsvm3 libthai-data libthai0 libtiff5 libtool
libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0
libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxdot4 libxext6
libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxmu6 libxpm4
libxrandr2 libxrender1 libxt6 m4 mime-support openssl po-debconf python
python-all python-all-dev python-atomicwrites python-attr
python-babel-localedata python-backports.functools-lru-cache python-cycler
python-dateutil python-decorator python-dev python-funcsigs python-joblib
python-kiwisolver python-matplotlib python-matplotlib-data
python-matplotlib-doc python-minimal python-more-itertools python-nose
python-numpy python-numpy-doc python-pandas python-pandas-lib python-pil
python-pkg-resources python-pluggy python-py python-pyparsing python-pytest
python-scipy python-scipy-doc python-setuptools python-six
python-subprocess32 python-tz python2 python2-dev python2-minimal python2.7
python2.7-dev python2.7-minimal python3 python3-alabaster python3-all
python3-all-dev python3-atomicwrites python3-attr python3-babel
python3-certifi python3-chardet python3-cloudpickle python3-cycler
python3-dateutil python3-decorator python3-dev python3-distutils python3-doc
python3-docutils python3-idna python3-imagesize python3-jinja2
python3-joblib python3-kiwisolver python3-lib2to3 python3-markupsafe
python3-matplotlib python3-minimal python3-more-itertools python3-networkx
python3-nose python3-numpy python3-numpydoc python3-packaging python3-pandas
python3-pandas-lib python3-pil python3-pkg-resources python3-pluggy
python3-py python3-pygments python3-pyparsing python3-pytest python3-pywt
python3-requests python3-roman python3-scipy python3-setuptools python3-six
python3-skimage python3-skimage-lib python3-sphinx python3-sphinx-gallery
python3-tz python3-urllib3 python3.6 python3.6-dev python3.6-doc
python3.6-minimal python3.7 python3.7-dev python3.7-minimal
sbuild-build-depends-scikit-learn-dummy sgml-base shared-mime-info
sphinx-common ttf-bitstream-vera ucf x11-common xkb-data xml-core
0 upgraded, 277 newly installed, 0 to remove and 0 not upgraded.
Need to get 403 MB of archives.
After this operation, 1225 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-96s1nU/apt_archive ./ sbuild-build-depends-scikit-learn-dummy 0.invalid.0 [1084 B]
Get:2 http://deb.debian.org/debian sid/main amd64 libpython2.7-minimal amd64 2.7.15-4 [394 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 python2.7-minimal amd64 2.7.15-4 [1361 kB]
Get:4 http://deb.debian.org/debian sid/main amd64 python2-minimal amd64 2.7.15-3 [41.3 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 python-minimal amd64 2.7.15-3 [20.9 kB]
Get:6 http://deb.debian.org/debian sid/main amd64 mime-support all 3.61 [37.1 kB]
Get:7 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.2.6-1 [105 kB]
Get:8 http://deb.debian.org/debian sid/main amd64 libpython2.7-stdlib amd64 2.7.15-4 [1907 kB]
Get:9 http://deb.debian.org/debian sid/main amd64 python2.7 amd64 2.7.15-4 [299 kB]
Get:10 http://deb.debian.org/debian sid/main amd64 libpython2-stdlib amd64 2.7.15-3 [20.7 kB]
Get:11 http://deb.debian.org/debian sid/main amd64 libpython-stdlib amd64 2.7.15-3 [20.7 kB]
Get:12 http://deb.debian.org/debian sid/main amd64 python2 amd64 2.7.15-3 [41.5 kB]
Get:13 http://deb.debian.org/debian sid/main amd64 python amd64 2.7.15-3 [22.7 kB]
Get:14 http://deb.debian.org/debian sid/main amd64 libpython3.6-minimal amd64 3.6.7-1 [573 kB]
Get:15 http://deb.debian.org/debian sid/main amd64 python3.6-minimal amd64 3.6.7-1 [1651 kB]
Get:16 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.6.7-1 [36.4 kB]
Get:17 http://deb.debian.org/debian sid/main amd64 libmpdec2 amd64 2.4.2-2 [87.2 kB]
Get:18 http://deb.debian.org/debian sid/main amd64 libpython3.6-stdlib amd64 3.6.7-1 [1707 kB]
Get:19 http://deb.debian.org/debian sid/main amd64 python3.6 amd64 3.6.7-1 [240 kB]
Get:20 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.6.7-1 [19.9 kB]
Get:21 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.6.7-1 [61.4 kB]
Get:22 http://deb.debian.org/debian sid/main amd64 libpython3.7-minimal amd64 3.7.1-1 [587 kB]
Get:23 http://deb.debian.org/debian sid/main amd64 python3.7-minimal amd64 3.7.1-1 [1729 kB]
Get:24 http://deb.debian.org/debian sid/main amd64 sgml-base all 1.29 [14.8 kB]
Get:25 http://deb.debian.org/debian sid/main amd64 dbus amd64 1.12.10-1 [233 kB]
Get:26 http://deb.debian.org/debian sid/main amd64 libmagic-mgc amd64 1:5.34-2 [239 kB]
Get:27 http://deb.debian.org/debian sid/main amd64 libmagic1 amd64 1:5.34-2 [116 kB]
Get:28 http://deb.debian.org/debian sid/main amd64 file amd64 1:5.34-2 [65.8 kB]
Get:29 http://deb.debian.org/debian sid/main amd64 gettext-base amd64 0.19.8.1-8 [122 kB]
Get:30 http://deb.debian.org/debian sid/main amd64 libpam-systemd amd64 239-11 [195 kB]
Get:31 http://deb.debian.org/debian sid/main amd64 ucf all 3.0038 [67.8 kB]
Get:32 http://deb.debian.org/debian sid/main amd64 hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:33 http://deb.debian.org/debian sid/main amd64 libglib2.0-0 amd64 2.58.1-2 [1223 kB]
Get:34 http://deb.debian.org/debian sid/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB]
Get:35 http://deb.debian.org/debian sid/main amd64 libpng16-16 amd64 1.6.34-2 [288 kB]
Get:36 http://deb.debian.org/debian sid/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB]
Get:37 http://deb.debian.org/debian sid/main amd64 libwebp6 amd64 0.6.1-2 [263 kB]
Get:38 http://deb.debian.org/debian sid/main amd64 libtiff5 amd64 4.0.9+git181026-1 [250 kB]
Get:39 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB]
Get:40 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB]
Get:41 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.13.1-1 [137 kB]
Get:42 http://deb.debian.org/debian sid/main amd64 libx11-data all 2:1.6.7-1 [298 kB]
Get:43 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.6.7-1 [754 kB]
Get:44 http://deb.debian.org/debian sid/main amd64 libfreetype6 amd64 2.8.1-2 [461 kB]
Get:45 http://deb.debian.org/debian sid/main amd64 libgraphite2-3 amd64 1.3.12-1 [80.2 kB]
Get:46 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 1.9.0-1 [923 kB]
Get:47 http://deb.debian.org/debian sid/main amd64 libicu-le-hb0 amd64 1.0.3+git161113-5 [14.6 kB]
Get:48 http://deb.debian.org/debian sid/main amd64 libicu60 amd64 60.2-6 [8073 kB]
Get:49 http://deb.debian.org/debian sid/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b1 [725 kB]
Get:50 http://deb.debian.org/debian sid/main amd64 shared-mime-info amd64 1.10-1 [766 kB]
Get:51 http://deb.debian.org/debian sid/main amd64 libgdk-pixbuf2.0-common all 2.38.0+dfsg-6 [314 kB]
Get:52 http://deb.debian.org/debian sid/main amd64 libgdk-pixbuf2.0-0 amd64 2.38.0+dfsg-6 [177 kB]
Get:53 http://deb.debian.org/debian sid/main amd64 gtk-update-icon-cache amd64 3.24.1-2 [81.1 kB]
Get:54 http://deb.debian.org/debian sid/main amd64 ttf-bitstream-vera all 1.10-8 [352 kB]
Get:55 http://deb.debian.org/debian sid/main amd64 fontconfig-config all 2.13.1-2 [280 kB]
Get:56 http://deb.debian.org/debian sid/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB]
Get:57 http://deb.debian.org/debian sid/main amd64 libpixman-1-0 amd64 0.34.0-2 [529 kB]
Get:58 http://deb.debian.org/debian sid/main amd64 libxcb-render0 amd64 1.13.1-1 [109 kB]
Get:59 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.13.1-1 [99.1 kB]
Get:60 http://deb.debian.org/debian sid/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB]
Get:61 http://deb.debian.org/debian sid/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB]
Get:62 http://deb.debian.org/debian sid/main amd64 libcairo2 amd64 1.16.0-1 [689 kB]
Get:63 http://deb.debian.org/debian sid/main amd64 libcroco3 amd64 0.6.12-2 [144 kB]
Get:64 http://deb.debian.org/debian sid/main amd64 fontconfig amd64 2.13.1-2 [405 kB]
Get:65 http://deb.debian.org/debian sid/main amd64 libfribidi0 amd64 1.0.5-3 [63.3 kB]
Get:66 http://deb.debian.org/debian sid/main amd64 libthai-data all 0.1.28-1 [170 kB]
Get:67 http://deb.debian.org/debian sid/main amd64 libdatrie1 amd64 0.2.12-1 [39.1 kB]
Get:68 http://deb.debian.org/debian sid/main amd64 libthai0 amd64 0.1.28-1 [53.9 kB]
Get:69 http://deb.debian.org/debian sid/main amd64 libpango-1.0-0 amd64 1.42.4-3 [184 kB]
Get:70 http://deb.debian.org/debian sid/main amd64 libpangoft2-1.0-0 amd64 1.42.4-3 [67.5 kB]
Get:71 http://deb.debian.org/debian sid/main amd64 libpangocairo-1.0-0 amd64 1.42.4-3 [55.4 kB]
Get:72 http://deb.debian.org/debian sid/main amd64 librsvg2-2 amd64 2.44.8-3 [1272 kB]
Get:73 http://deb.debian.org/debian sid/main amd64 librsvg2-common amd64 2.44.8-3 [23.0 kB]
Get:74 http://deb.debian.org/debian sid/main amd64 adwaita-icon-theme all 3.30.0-1 [11.7 MB]
Get:75 http://deb.debian.org/debian sid/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB]
Get:76 http://deb.debian.org/debian sid/main amd64 m4 amd64 1.4.18-1 [202 kB]
Get:77 http://deb.debian.org/debian sid/main amd64 autoconf all 2.69-11 [341 kB]
Get:78 http://deb.debian.org/debian sid/main amd64 autotools-dev all 20180224.1 [77.0 kB]
Get:79 http://deb.debian.org/debian sid/main amd64 automake all 1:1.16.1-4 [771 kB]
Get:80 http://deb.debian.org/debian sid/main amd64 autopoint all 0.19.8.1-8 [434 kB]
Get:81 http://deb.debian.org/debian sid/main amd64 openssl amd64 1.1.1-2 [833 kB]
Get:82 http://deb.debian.org/debian sid/main amd64 ca-certificates all 20180409 [161 kB]
Get:83 http://deb.debian.org/debian sid/main amd64 cython3 amd64 0.28.4-1 [3200 kB]
Get:84 http://deb.debian.org/debian sid/main amd64 dbus-user-session amd64 1.12.10-1 [91.0 kB]
Get:85 http://deb.debian.org/debian sid/main amd64 libdconf1 amd64 0.30.0-1 [40.5 kB]
Get:86 http://deb.debian.org/debian sid/main amd64 dconf-service amd64 0.30.0-1 [36.1 kB]
Get:87 http://deb.debian.org/debian sid/main amd64 dconf-gsettings-backend amd64 0.30.0-1 [28.8 kB]
Get:88 http://deb.debian.org/debian sid/main amd64 libtool all 2.4.6-6 [547 kB]
Get:89 http://deb.debian.org/debian sid/main amd64 dh-autoreconf all 19 [16.9 kB]
Get:90 http://deb.debian.org/debian sid/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:91 http://deb.debian.org/debian sid/main amd64 libfile-stripnondeterminism-perl all 0.044-1 [20.3 kB]
Get:92 http://deb.debian.org/debian sid/main amd64 dh-strip-nondeterminism all 0.044-1 [12.3 kB]
Get:93 http://deb.debian.org/debian sid/main amd64 dwz amd64 0.12-2 [77.5 kB]
Get:94 http://deb.debian.org/debian sid/main amd64 gettext amd64 0.19.8.1-8 [1304 kB]
Get:95 http://deb.debian.org/debian sid/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:96 http://deb.debian.org/debian sid/main amd64 po-debconf all 1.0.20 [247 kB]
Get:97 http://deb.debian.org/debian sid/main amd64 debhelper all 11.5.1 [992 kB]
Get:98 http://deb.debian.org/debian sid/main amd64 python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:99 http://deb.debian.org/debian sid/main amd64 python3-distutils all 3.7.1-1 [144 kB]
Get:100 http://deb.debian.org/debian sid/main amd64 dh-python all 3.20180927 [95.8 kB]
Get:101 http://deb.debian.org/debian sid/main amd64 xml-core all 0.18 [23.4 kB]
Get:102 http://deb.debian.org/debian sid/main amd64 docutils-common all 0.14+dfsg-3 [204 kB]
Get:103 http://deb.debian.org/debian sid/main amd64 fonts-lyx all 2.3.1-2-2 [199 kB]
Get:104 http://deb.debian.org/debian sid/main amd64 fonts-mathjax all 2.7.4+dfsg-1 [2209 kB]
Get:105 http://deb.debian.org/debian sid/main amd64 libproxy1v5 amd64 0.4.15-3 [57.2 kB]
Get:106 http://deb.debian.org/debian sid/main amd64 glib-networking-common all 2.58.0-1 [59.2 kB]
Get:107 http://deb.debian.org/debian sid/main amd64 glib-networking-services amd64 2.58.0-1 [13.5 kB]
Get:108 http://deb.debian.org/debian sid/main amd64 gsettings-desktop-schemas all 3.28.1-1 [529 kB]
Get:109 http://deb.debian.org/debian sid/main amd64 glib-networking amd64 2.58.0-1 [54.3 kB]
Get:110 http://deb.debian.org/debian sid/main amd64 libcdt5 amd64 2.40.1-5+b1 [60.8 kB]
Get:111 http://deb.debian.org/debian sid/main amd64 libcgraph6 amd64 2.40.1-5+b1 [84.5 kB]
Get:112 http://deb.debian.org/debian sid/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB]
Get:113 http://deb.debian.org/debian sid/main amd64 libgd3 amd64 2.2.5-5 [136 kB]
Get:114 http://deb.debian.org/debian sid/main amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-4 [158 kB]
Get:115 http://deb.debian.org/debian sid/main amd64 libltdl7 amd64 2.4.6-6 [390 kB]
Get:116 http://deb.debian.org/debian sid/main amd64 libpathplan4 amd64 2.40.1-5+b1 [63.7 kB]
Get:117 http://deb.debian.org/debian sid/main amd64 libxdot4 amd64 2.40.1-5+b1 [57.2 kB]
Get:118 http://deb.debian.org/debian sid/main amd64 libgvc6 amd64 2.40.1-5+b1 [646 kB]
Get:119 http://deb.debian.org/debian sid/main amd64 libgvpr2 amd64 2.40.1-5+b1 [214 kB]
Get:120 http://deb.debian.org/debian sid/main amd64 x11-common all 1:7.7+19 [251 kB]
Get:121 http://deb.debian.org/debian sid/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB]
Get:122 http://deb.debian.org/debian sid/main amd64 liblab-gamut1 amd64 2.40.1-5+b1 [220 kB]
Get:123 http://deb.debian.org/debian sid/main amd64 libsm6 amd64 2:1.2.2-1+b3 [33.3 kB]
Get:124 http://deb.debian.org/debian sid/main amd64 libxt6 amd64 1:1.1.5-1 [188 kB]
Get:125 http://deb.debian.org/debian sid/main amd64 libxmu6 amd64 2:1.1.2-2 [60.3 kB]
Get:126 http://deb.debian.org/debian sid/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB]
Get:127 http://deb.debian.org/debian sid/main amd64 graphviz amd64 2.40.1-5+b1 [595 kB]
Get:128 http://deb.debian.org/debian sid/main amd64 libatk1.0-data all 2.30.0-1 [145 kB]
Get:129 http://deb.debian.org/debian sid/main amd64 libatk1.0-0 amd64 2.30.0-1 [50.5 kB]
Get:130 http://deb.debian.org/debian sid/main amd64 libatspi2.0-0 amd64 2.30.0-4 [64.9 kB]
Get:131 http://deb.debian.org/debian sid/main amd64 libatk-bridge2.0-0 amd64 2.30.0-2 [61.5 kB]
Get:132 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 8.2.0-9 [580 kB]
Get:133 http://deb.debian.org/debian sid/main amd64 libatlas3-base amd64 3.10.3-7+b1 [3750 kB]
Get:134 http://deb.debian.org/debian sid/main amd64 libatlas-base-dev amd64 3.10.3-7+b1 [4008 kB]
Get:135 http://deb.debian.org/debian sid/main amd64 libavahi-common-data amd64 0.7-4+b1 [122 kB]
Get:136 http://deb.debian.org/debian sid/main amd64 libavahi-common3 amd64 0.7-4+b1 [54.6 kB]
Get:137 http://deb.debian.org/debian sid/main amd64 libavahi-client3 amd64 0.7-4+b1 [58.1 kB]
Get:138 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.8.0-1+b1 [148 kB]
Get:139 http://deb.debian.org/debian sid/main amd64 libblas-dev amd64 3.8.0-1+b1 [154 kB]
Get:140 http://deb.debian.org/debian sid/main amd64 libcairo-gobject2 amd64 1.16.0-1 [124 kB]
Get:141 http://deb.debian.org/debian sid/main amd64 liblcms2-2 amd64 2.9-3 [145 kB]
Get:142 http://deb.debian.org/debian sid/main amd64 libcolord2 amd64 1.4.3-3+b1 [140 kB]
Get:143 http://deb.debian.org/debian sid/main amd64 libcups2 amd64 2.2.8-5 [322 kB]
Get:144 http://deb.debian.org/debian sid/main amd64 libepoxy0 amd64 1.5.3-0.1 [190 kB]
Get:145 http://deb.debian.org/debian sid/main amd64 libexpat1-dev amd64 2.2.6-1 [152 kB]
Get:146 http://deb.debian.org/debian sid/main amd64 libjson-glib-1.0-common all 1.4.4-1 [52.3 kB]
Get:147 http://deb.debian.org/debian sid/main amd64 libjson-glib-1.0-0 amd64 1.4.4-1 [60.9 kB]
Get:148 http://deb.debian.org/debian sid/main amd64 libsoup2.4-1 amd64 2.64.1-3 [253 kB]
Get:149 http://deb.debian.org/debian sid/main amd64 libsoup-gnome2.4-1 amd64 2.64.1-3 [17.9 kB]
Get:150 http://deb.debian.org/debian sid/main amd64 librest-0.7-0 amd64 0.8.1-1 [33.7 kB]
Get:151 http://deb.debian.org/debian sid/main amd64 libwayland-client0 amd64 1.16.0-1 [26.4 kB]
Get:152 http://deb.debian.org/debian sid/main amd64 libwayland-cursor0 amd64 1.16.0-1 [14.1 kB]
Get:153 http://deb.debian.org/debian sid/main amd64 libwayland-egl1 amd64 1.16.0-1 [8204 B]
Get:154 http://deb.debian.org/debian sid/main amd64 libxcomposite1 amd64 1:0.4.4-2 [16.5 kB]
Get:155 http://deb.debian.org/debian sid/main amd64 libxfixes3 amd64 1:5.0.3-1 [21.9 kB]
Get:156 http://deb.debian.org/debian sid/main amd64 libxcursor1 amd64 1:1.1.15-2 [36.6 kB]
Get:157 http://deb.debian.org/debian sid/main amd64 libxdamage1 amd64 1:1.1.4-3 [14.4 kB]
Get:158 http://deb.debian.org/debian sid/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB]
Get:159 http://deb.debian.org/debian sid/main amd64 libxinerama1 amd64 2:1.1.4-1 [16.6 kB]
Get:160 http://deb.debian.org/debian sid/main amd64 xkb-data all 2.23.1-1 [675 kB]
Get:161 http://deb.debian.org/debian sid/main amd64 libxkbcommon0 amd64 0.8.2-1 [123 kB]
Get:162 http://deb.debian.org/debian sid/main amd64 libxrandr2 amd64 2:1.5.1-1 [37.5 kB]
Get:163 http://deb.debian.org/debian sid/main amd64 libgtk-3-common all 3.24.1-2 [3661 kB]
Get:164 http://deb.debian.org/debian sid/main amd64 libgtk-3-0 amd64 3.24.1-2 [2585 kB]
Get:165 http://deb.debian.org/debian sid/main amd64 libjs-jquery all 3.2.1-1 [154 kB]
Get:166 http://deb.debian.org/debian sid/main amd64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:167 http://deb.debian.org/debian sid/main amd64 libjs-mathjax all 2.7.4+dfsg-1 [5658 kB]
Get:168 http://deb.debian.org/debian sid/main amd64 libjs-underscore all 1.8.3~dfsg-1 [63.8 kB]
Get:169 http://deb.debian.org/debian sid/main amd64 libjs-sphinxdoc all 1.7.9-1 [92.3 kB]
Get:170 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.8.0-1+b1 [2112 kB]
Get:171 http://deb.debian.org/debian sid/main amd64 libpython2.7 amd64 2.7.15-4 [1034 kB]
Get:172 http://deb.debian.org/debian sid/main amd64 libpython2.7-dev amd64 2.7.15-4 [31.5 MB]
Get:173 http://deb.debian.org/debian sid/main amd64 libpython2-dev amd64 2.7.15-3 [20.8 kB]
Get:174 http://deb.debian.org/debian sid/main amd64 libpython-dev amd64 2.7.15-3 [20.8 kB]
Get:175 http://deb.debian.org/debian sid/main amd64 libpython-all-dev amd64 2.7.15-3 [1064 B]
Get:176 http://deb.debian.org/debian sid/main amd64 libpython3.6 amd64 3.6.7-1 [1416 kB]
Get:177 http://deb.debian.org/debian sid/main amd64 libpython3.6-dev amd64 3.6.7-1 [44.8 MB]
Get:178 http://deb.debian.org/debian sid/main amd64 libpython3-dev amd64 3.6.7-1 [20.0 kB]
Get:179 http://deb.debian.org/debian sid/main amd64 libpython3.7-stdlib amd64 3.7.1-1 [1731 kB]
Get:180 http://deb.debian.org/debian sid/main amd64 libpython3.7 amd64 3.7.1-1 [1495 kB]
Get:181 http://deb.debian.org/debian sid/main amd64 libpython3.7-dev amd64 3.7.1-1 [48.3 MB]
Get:182 http://deb.debian.org/debian sid/main amd64 libpython3-all-dev amd64 3.6.7-1 [1072 B]
Get:183 http://deb.debian.org/debian sid/main amd64 librsvg2-bin amd64 2.44.8-3 [34.6 kB]
Get:184 http://deb.debian.org/debian sid/main amd64 libsvm3 amd64 3.21+ds-1.2 [41.6 kB]
Get:185 http://deb.debian.org/debian sid/main amd64 libsvm-dev amd64 3.21+ds-1.2 [41.9 kB]
Get:186 http://deb.debian.org/debian sid/main amd64 libwebpdemux2 amd64 0.6.1-2 [87.5 kB]
Get:187 http://deb.debian.org/debian sid/main amd64 libwebpmux3 amd64 0.6.1-2 [97.7 kB]
Get:188 http://deb.debian.org/debian sid/main amd64 python-all amd64 2.7.15-3 [1044 B]
Get:189 http://deb.debian.org/debian sid/main amd64 python2.7-dev amd64 2.7.15-4 [301 kB]
Get:190 http://deb.debian.org/debian sid/main amd64 python2-dev amd64 2.7.15-3 [1212 B]
Get:191 http://deb.debian.org/debian sid/main amd64 python-dev amd64 2.7.15-3 [1192 B]
Get:192 http://deb.debian.org/debian sid/main amd64 python-all-dev amd64 2.7.15-3 [1068 B]
Get:193 http://deb.debian.org/debian sid/main amd64 python-atomicwrites all 1.1.5-2 [6808 B]
Get:194 http://deb.debian.org/debian sid/main amd64 python-attr all 18.2.0-1 [37.2 kB]
Get:195 http://deb.debian.org/debian sid/main amd64 python-babel-localedata all 2.6.0+dfsg.1-1 [4083 kB]
Get:196 http://deb.debian.org/debian sid/main amd64 python-backports.functools-lru-cache all 1.5-1 [6456 B]
Get:197 http://deb.debian.org/debian sid/main amd64 python-six all 1.11.0-2 [15.1 kB]
Get:198 http://deb.debian.org/debian sid/main amd64 python-cycler all 0.10.0-1 [7448 B]
Get:199 http://deb.debian.org/debian sid/main amd64 python-dateutil all 2.7.3-1 [76.6 kB]
Get:200 http://deb.debian.org/debian sid/main amd64 python-decorator all 4.3.0-1 [14.2 kB]
Get:201 http://deb.debian.org/debian sid/main amd64 python-funcsigs all 1.0.2-4 [13.7 kB]
Get:202 http://deb.debian.org/debian sid/main amd64 python-joblib all 0.12.5-1 [187 kB]
Get:203 http://deb.debian.org/debian sid/main amd64 python-pkg-resources all 40.5.0-1 [180 kB]
Get:204 http://deb.debian.org/debian sid/main amd64 python-kiwisolver amd64 1.0.1-2+b1 [67.3 kB]
Get:205 http://deb.debian.org/debian sid/main amd64 python-matplotlib-data all 2.2.2-4 [4123 kB]
Get:206 http://deb.debian.org/debian sid/main amd64 python-pyparsing all 2.2.0+dfsg1-2 [89.5 kB]
Get:207 http://deb.debian.org/debian sid/main amd64 python-tz all 2018.7-1 [33.6 kB]
Get:208 http://deb.debian.org/debian sid/main amd64 python-numpy amd64 1:1.14.5-1+b1 [2005 kB]
Get:209 http://deb.debian.org/debian sid/main amd64 python-subprocess32 amd64 3.5.3-1 [29.9 kB]
Get:210 http://deb.debian.org/debian sid/main amd64 python-matplotlib amd64 2.2.2-4+b1 [5056 kB]
Get:211 http://deb.debian.org/debian sid/main amd64 python-matplotlib-doc all 2.2.2-4 [61.5 MB]
Get:212 http://deb.debian.org/debian sid/main amd64 python-more-itertools all 4.2.0-1 [42.3 kB]
Get:213 http://deb.debian.org/debian sid/main amd64 python-nose all 1.3.7-4 [132 kB]
Get:214 http://deb.debian.org/debian sid/main amd64 python-numpy-doc all 1:1.14.5-1 [3337 kB]
Get:215 http://deb.debian.org/debian sid/main amd64 python-pandas-lib amd64 0.23.3-1 [3484 kB]
Get:216 http://deb.debian.org/debian sid/main amd64 python-pandas all 0.23.3-1 [1743 kB]
Get:217 http://deb.debian.org/debian sid/main amd64 python-pil amd64 5.3.0-1 [390 kB]
Get:218 http://deb.debian.org/debian sid/main amd64 python-pluggy all 0.8.0-1 [20.5 kB]
Get:219 http://deb.debian.org/debian sid/main amd64 python-py all 1.7.0-1 [86.4 kB]
Get:220 http://deb.debian.org/debian sid/main amd64 python-pytest all 3.6.4-1 [221 kB]
Get:221 http://deb.debian.org/debian sid/main amd64 python-scipy amd64 1.1.0-2 [10.1 MB]
Get:222 http://deb.debian.org/debian sid/main amd64 python-scipy-doc all 1.1.0-2 [21.4 MB]
Get:223 http://deb.debian.org/debian sid/main amd64 python-setuptools all 40.5.0-1 [376 kB]
Get:224 http://deb.debian.org/debian sid/main amd64 python3-alabaster all 0.7.8-1 [18.4 kB]
Get:225 http://deb.debian.org/debian sid/main amd64 python3.7 amd64 3.7.1-1 [317 kB]
Get:226 http://deb.debian.org/debian sid/main amd64 python3-all amd64 3.6.7-1 [1068 B]
Get:227 http://deb.debian.org/debian sid/main amd64 python3.6-dev amd64 3.6.7-1 [520 kB]
Get:228 http://deb.debian.org/debian sid/main amd64 python3-dev amd64 3.6.7-1 [1264 B]
Get:229 http://deb.debian.org/debian sid/main amd64 python3.7-dev amd64 3.7.1-1 [520 kB]
Get:230 http://deb.debian.org/debian sid/main amd64 python3-all-dev amd64 3.6.7-1 [1076 B]
Get:231 http://deb.debian.org/debian sid/main amd64 python3-atomicwrites all 1.1.5-2 [6892 B]
Get:232 http://deb.debian.org/debian sid/main amd64 python3-attr all 18.2.0-1 [37.3 kB]
Get:233 http://deb.debian.org/debian sid/main amd64 python3-pkg-resources all 40.5.0-1 [151 kB]
Get:234 http://deb.debian.org/debian sid/main amd64 python3-tz all 2018.7-1 [27.0 kB]
Get:235 http://deb.debian.org/debian sid/main amd64 python3-babel all 2.6.0+dfsg.1-1 [96.7 kB]
Get:236 http://deb.debian.org/debian sid/main amd64 python3-certifi all 2018.8.24-1 [140 kB]
Get:237 http://deb.debian.org/debian sid/main amd64 python3-chardet all 3.0.4-1 [80.2 kB]
Get:238 http://deb.debian.org/debian sid/main amd64 python3-cloudpickle all 0.5.6-1 [15.5 kB]
Get:239 http://deb.debian.org/debian sid/main amd64 python3-six all 1.11.0-2 [15.2 kB]
Get:240 http://deb.debian.org/debian sid/main amd64 python3-cycler all 0.10.0-1 [7556 B]
Get:241 http://deb.debian.org/debian sid/main amd64 python3-dateutil all 2.7.3-1 [64.3 kB]
Get:242 http://deb.debian.org/debian sid/main amd64 python3-decorator all 4.3.0-1 [14.3 kB]
Get:243 http://deb.debian.org/debian sid/main amd64 python3.6-doc all 3.6.7-1 [9210 kB]
Get:244 http://deb.debian.org/debian sid/main amd64 python3-doc all 3.6.7-1 [20.0 kB]
Get:245 http://deb.debian.org/debian sid/main amd64 python3-roman all 2.0.0-3 [8768 B]
Get:246 http://deb.debian.org/debian sid/main amd64 python3-docutils all 0.14+dfsg-3 [377 kB]
Get:247 http://deb.debian.org/debian sid/main amd64 python3-idna all 2.6-1 [34.3 kB]
Get:248 http://deb.debian.org/debian sid/main amd64 python3-imagesize all 1.0.0-1 [4960 B]
Get:249 http://deb.debian.org/debian sid/main amd64 python3-markupsafe amd64 1.0-1+b2 [14.5 kB]
Get:250 http://deb.debian.org/debian sid/main amd64 python3-jinja2 all 2.10-1 [106 kB]
Get:251 http://deb.debian.org/debian sid/main amd64 python3-joblib all 0.12.5-1 [184 kB]
Get:252 http://deb.debian.org/debian sid/main amd64 python3-kiwisolver amd64 1.0.1-2+b1 [65.4 kB]
Get:253 http://deb.debian.org/debian sid/main amd64 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB]
Get:254 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:1.14.5-1+b1 [2216 kB]
Get:255 http://deb.debian.org/debian sid/main amd64 python3-matplotlib amd64 2.2.2-4+b1 [5065 kB]
Get:256 http://deb.debian.org/debian sid/main amd64 python3-more-itertools all 4.2.0-1 [42.2 kB]
Get:257 http://deb.debian.org/debian sid/main amd64 python3-networkx all 2.1-1 [775 kB]
Get:258 http://deb.debian.org/debian sid/main amd64 python3-nose all 1.3.7-4 [132 kB]
Get:259 http://deb.debian.org/debian sid/main amd64 sphinx-common all 1.7.9-1 [437 kB]
Get:260 http://deb.debian.org/debian sid/main amd64 python3-packaging all 18.0-1 [20.3 kB]
Get:261 http://deb.debian.org/debian sid/main amd64 python3-pygments all 2.2.0+dfsg-2 [588 kB]
Get:262 http://deb.debian.org/debian sid/main amd64 python3-urllib3 all 1.24-1 [96.8 kB]
Get:263 http://deb.debian.org/debian sid/main amd64 python3-requests all 2.20.0-2 [66.7 kB]
Get:264 http://deb.debian.org/debian sid/main amd64 python3-sphinx all 1.7.9-1 [449 kB]
Get:265 http://deb.debian.org/debian sid/main amd64 python3-numpydoc all 0.7.0-1 [18.3 kB]
Get:266 http://deb.debian.org/debian sid/main amd64 python3-pandas-lib amd64 0.23.3-1 [5721 kB]
Get:267 http://deb.debian.org/debian sid/main amd64 python3-pandas all 0.23.3-1 [1743 kB]
Get:268 http://deb.debian.org/debian sid/main amd64 python3-pil amd64 5.3.0-1 [404 kB]
Get:269 http://deb.debian.org/debian sid/main amd64 python3-pluggy all 0.8.0-1 [20.6 kB]
Get:270 http://deb.debian.org/debian sid/main amd64 python3-py all 1.7.0-1 [86.5 kB]
Get:271 http://deb.debian.org/debian sid/main amd64 python3-pytest all 3.6.4-1 [221 kB]
Get:272 http://deb.debian.org/debian sid/main amd64 python3-pywt amd64 0.5.1-1.1+b3 [1099 kB]
Get:273 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.1.0-2 [11.5 MB]
Get:274 http://deb.debian.org/debian sid/main amd64 python3-setuptools all 40.5.0-1 [301 kB]
Get:275 http://deb.debian.org/debian sid/main amd64 python3-skimage-lib amd64 0.14.1-2 [2849 kB]
Get:276 http://deb.debian.org/debian sid/main amd64 python3-skimage all 0.14.1-2 [19.9 MB]
Get:277 http://deb.debian.org/debian sid/main amd64 python3-sphinx-gallery all 0.2.0-1 [71.7 kB]
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Setting up python3-pkg-resources (40.5.0-1) ...
Setting up python3.7-dev (3.7.1-1) ...
Setting up python3-pluggy (0.8.0-1) ...
Setting up libpython3.6-dev:amd64 (3.6.7-1) ...
Setting up python2 (2.7.15-3) ...
Setting up python3-skimage-lib:amd64 (0.14.1-2) ...
Setting up python3-markupsafe (1.0-1+b2) ...
Setting up python3-pandas-lib (0.23.3-1) ...
Setting up libpython2-dev:amd64 (2.7.15-3) ...
Setting up libpython-stdlib:amd64 (2.7.15-3) ...
Setting up python3-nose (1.3.7-4) ...
Setting up python3-chardet (3.0.4-1) ...
Setting up python3-jinja2 (2.10-1) ...
Setting up python2-dev (2.7.15-3) ...
Setting up libxcomposite1:amd64 (1:0.4.4-2) ...
Setting up libxcb-shm0:amd64 (1.13.1-1) ...
Setting up python3-attr (18.2.0-1) ...
Setting up libxpm4:amd64 (1:3.5.12-1) ...
Setting up libxt6:amd64 (1:1.1.5-1) ...
Setting up libxrender1:amd64 (1:0.9.10-1) ...
Setting up libavahi-client3:amd64 (0.7-4+b1) ...
Setting up cython3 (0.28.4-1) ...
Setting up python3-urllib3 (1.24-1) ...
Setting up python3-pywt (0.5.1-1.1+b3) ...
Setting up python3-packaging (18.0-1) ...
Setting up python3.6-dev (3.6.7-1) ...
Setting up python3-lib2to3 (3.7.1-1) ...
Setting up dconf-gsettings-backend:amd64 (0.30.0-1) ...
Setting up python3-decorator (4.3.0-1) ...
Setting up python3-tz (2018.7-1) ...
Setting up python3-distutils (3.7.1-1) ...
Setting up python (2.7.15-3) ...
Setting up python3-joblib (0.12.5-1) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up python3-dateutil (2.7.3-1) ...
Setting up libcups2:amd64 (2.2.8-5) ...
Setting up python3-atomicwrites (1.1.5-2) ...
Setting up libpython3-dev:amd64 (3.6.7-1) ...
Setting up python-pyparsing (2.2.0+dfsg1-2) ...
Setting up python3-pygments (2.2.0+dfsg-2) ...
Setting up libpython-dev:amd64 (2.7.15-3) ...
Setting up python-atomicwrites (1.1.5-2) ...
Setting up python3-roman (2.0.0-3) ...
Setting up python3-pil:amd64 (5.3.0-1) ...
Setting up python3-scipy (1.1.0-2) ...
Setting up python3-kiwisolver (1.0.1-2+b1) ...
Setting up python3-imagesize (1.0.0-1) ...
Setting up python-attr (18.2.0-1) ...
Setting up libxext6:amd64 (2:1.3.3-1+b2) ...
Setting up python3-cloudpickle (0.5.6-1) ...
Setting up libxfixes3:amd64 (1:5.0.3-1) ...
Setting up gsettings-desktop-schemas (3.28.1-1) ...
Setting up python3-py (1.7.0-1) ...
Setting up libgtk-3-common (3.24.1-2) ...
Setting up python-backports.functools-lru-cache (1.5-1) ...
Setting up python-dev (2.7.15-3) ...
Setting up libatspi2.0-0:amd64 (2.30.0-4) ...
Setting up python-joblib (0.12.5-1) ...
Setting up python3-pytest (3.6.4-1) ...
Setting up python-pluggy (0.8.0-1) ...
Setting up python-tz (2018.7-1) ...
Setting up libpython-all-dev:amd64 (2.7.15-3) ...
Setting up libgd3:amd64 (2.2.5-5) ...
Setting up python-pkg-resources (40.5.0-1) ...
Setting up python-numpy (1:1.14.5-1+b1) ...
Setting up libxmu6:amd64 (2:1.1.2-2) ...
Setting up python3-babel (2.6.0+dfsg.1-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python-six (1.11.0-2) ...
Setting up libxcursor1:amd64 (1:1.1.15-2) ...
Setting up libpython3-all-dev:amd64 (3.6.7-1) ...
Setting up python-pandas-lib (0.23.3-1) ...
Setting up python3-networkx (2.1-1) ...
Setting up glib-networking:amd64 (2.58.0-1) ...
Setting up libpango-1.0-0:amd64 (1.42.4-3) ...
Setting up libatk-bridge2.0-0:amd64 (2.30.0-2) ...
Setting up python3-requests (2.20.0-2) ...
Setting up python-funcsigs (1.0.2-4) ...
Setting up python-decorator (4.3.0-1) ...
Setting up python3-pandas (0.23.3-1) ...
Setting up python-subprocess32 (3.5.3-1) ...
Setting up python3-setuptools (40.5.0-1) ...
Setting up python3-matplotlib (2.2.2-4+b1) ...
Setting up dh-python (3.20180927) ...
Setting up python-nose (1.3.7-4) ...
Setting up python-all (2.7.15-3) ...
Setting up python-pil:amd64 (5.3.0-1) ...
Setting up libxrandr2:amd64 (2:1.5.1-1) ...
Setting up libxi6:amd64 (2:1.7.9-1) ...
Setting up libxaw7:amd64 (2:1.0.13-1+b2) ...
Setting up libcairo2:amd64 (1.16.0-1) ...
Setting up python-setuptools (40.5.0-1) ...
Setting up libxinerama1:amd64 (2:1.1.4-1) ...
Setting up libxdamage1:amd64 (1:1.1.4-3) ...
Setting up python-kiwisolver (1.0.1-2+b1) ...
Setting up python-scipy (1.1.0-2) ...
Setting up python-py (1.7.0-1) ...
Setting up python-more-itertools (4.2.0-1) ...
Setting up libcairo-gobject2:amd64 (1.16.0-1) ...
Setting up python3-dev (3.6.7-1) ...
Setting up python-pytest (3.6.4-1) ...
Setting up python-cycler (0.10.0-1) ...
Setting up libpangoft2-1.0-0:amd64 (1.42.4-3) ...
Setting up python-dateutil (2.7.3-1) ...
Setting up python-all-dev (2.7.15-3) ...
Setting up python3-all (3.6.7-1) ...
Setting up python3-skimage (0.14.1-2) ...
Setting up python3-all-dev (3.6.7-1) ...
Setting up python-pandas (0.23.3-1) ...
Setting up python-matplotlib (2.2.2-4+b1) ...
Setting up libpangocairo-1.0-0:amd64 (1.42.4-3) ...
Setting up libgvc6 (2.40.1-5+b1) ...
Setting up graphviz (2.40.1-5+b1) ...
Processing triggers for sgml-base (1.29) ...
Setting up docutils-common (0.14+dfsg-3) ...
Processing triggers for sgml-base (1.29) ...
Setting up python3-docutils (0.14+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (1.7.9-1) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up python3-numpydoc (0.7.0-1) ...
Setting up python3-sphinx-gallery (0.2.0-1) ...
Setting up libicu-le-hb0:amd64 (1.0.3+git161113-5) ...
Setting up libicu60:amd64 (60.2-6) ...
Setting up libxml2:amd64 (2.9.4+dfsg1-7+b1) ...
Setting up libcroco3:amd64 (0.6.12-2) ...
Setting up shared-mime-info (1.10-1) ...
Setting up gettext (0.19.8.1-8) ...
Setting up libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-6) ...
Setting up libsoup2.4-1:amd64 (2.64.1-3) ...
Setting up libsoup-gnome2.4-1:amd64 (2.64.1-3) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up gtk-update-icon-cache (3.24.1-2) ...
Setting up librest-0.7-0:amd64 (0.8.1-1) ...
Setting up librsvg2-2:amd64 (2.44.8-3) ...
Setting up po-debconf (1.0.20) ...
Setting up librsvg2-common:amd64 (2.44.8-3) ...
Setting up adwaita-icon-theme (3.30.0-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up debhelper (11.5.1) ...
Setting up dh-autoreconf (19) ...
Setting up libgtk-3-0:amd64 (3.24.1-2) ...
Setting up dh-strip-nondeterminism (0.044-1) ...
Setting up librsvg2-bin (2.44.8-3) ...
Setting up sbuild-build-depends-scikit-learn-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8) ...
Processing triggers for systemd (239-11) ...
Processing triggers for ca-certificates (20180409) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.38.0+dfsg-6) ...
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64)
Toolchain package versions: binutils_2.31.1-7 dpkg-dev_1.19.2 g++-8_8.2.0-9 gcc-8_8.2.0-9 libc6-dev_2.27-8 libstdc++-8-dev_8.2.0-9 libstdc++6_8.2.0-9 linux-libc-dev_4.18.10-2+b1
Package versions: acl_2.2.52-3+b1 adduser_3.118 adwaita-icon-theme_3.30.0-1 apt_1.7.0 apt-utils_1.7.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-8 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-7 binutils-common_2.31.1-7 binutils-x86-64-linux-gnu_2.31.1-7 bsdmainutils_11.1.2+b1 bsdutils_1:2.32.1-0.2 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20180409 ccache_3.5-1 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2 cpp-8_8.2.0-9 cron_3.0pl1-130 cython3_0.28.4-1 dash_0.5.10.2-1 dbus_1.12.10-1 dbus-user-session_1.12.10-1 dconf-gsettings-backend_0.30.0-1 dconf-service_0.30.0-1 debconf_1.5.69 debconf-i18n_1.5.69 debhelper_11.5.1 debian-archive-keyring_2018.1 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_0.044-1 diffutils_1:3.6-1 dirmngr_2.2.10-3 dmidecode_3.2-1 dmsetup_2:1.02.145-4.1 docutils-common_0.14+dfsg-3 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 eatmydata_105-7 fakeroot_1.23-1 fdisk_2.32.1-0.2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-lyx_2.3.1-2-2 fonts-mathjax_2.7.4+dfsg-1 g++_4:8.2.0-2 g++-8_8.2.0-9 gcc_4:8.2.0-2 gcc-4.7-base_4.7.4-3 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2 gcc-7-base_7.3.0-30 gcc-8_8.2.0-9 gcc-8-base_8.2.0-9 gettext_0.19.8.1-8 gettext-base_0.19.8.1-8 glib-networking_2.58.0-1 glib-networking-common_2.58.0-1 glib-networking-services_2.58.0-1 gnupg_2.2.10-3 gnupg-l10n_2.2.10-3 gnupg-utils_2.2.10-3 gpg_2.2.10-3 gpg-agent_2.2.10-3 gpg-wks-client_2.2.10-3 gpg-wks-server_2.2.10-3 gpgconf_2.2.10-3 gpgsm_2.2.10-3 gpgv_2.2.10-3 graphviz_2.40.1-5+b1 grep_3.1-2 groff-base_1.22.3-10 gsettings-desktop-schemas_3.28.1-1 gtk-update-icon-cache_3.24.1-2 gzip_1.9-2.1 hicolor-icon-theme_0.17-2 hostname_3.21 ifupdown_0.8.34 init_1.55 init-system-helpers_1.55 initscripts_2.88dsf-59.11 insserv_1.14.0-5.4+b1 intltool-debian_0.35.0+20060710.4 iproute2_4.18.0-2 iputils-ping_3:20180629-2 isc-dhcp-client_4.3.5-4+b1 isc-dhcp-common_4.3.5-4+b1 kmod_25-1 less_487-0.1+b1 libacl1_2.2.52-3+b1 libapparmor1_2.13.1-3+b1 libapt-inst1.5_1.0.9.10 libapt-inst2.0_1.7.0 libapt-pkg4.12_1.0.9.10 libapt-pkg5.0_1.7.0 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan1_4.9.4-2 libasan5_8.2.0-9 libassuan0_2.5.1-2 libatk-bridge2.0-0_2.30.0-2 libatk1.0-0_2.30.0-1 libatk1.0-data_2.30.0-1 libatlas-base-dev_3.10.3-7+b1 libatlas3-base_3.10.3-7+b1 libatomic1_8.2.0-9 libatspi2.0-0_2.30.0-4 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-7 libblas-dev_3.8.0-1+b1 libblas3_3.8.0-1+b1 libblkid1_2.32.1-0.2 libboost-iostreams1.49.0_1.49.0-4+b3 libboost-iostreams1.54.0_1.54.0+dfsg-7 libboost-iostreams1.55.0_1.55.0+dfsg-4 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.27-8 libc-dev-bin_2.27-8 libc6_2.27-8 libc6-dev_2.27-8 libcairo-gobject2_1.16.0-1 libcairo2_1.16.0-1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcap2-bin_1:2.25-1.2 libcc1-0_8.2.0-9 libcdt5_2.40.1-5+b1 libcgraph6_2.40.1-5+b1 libcilkrts5_7.3.0-30 libcolord2_1.4.3-3+b1 libcom-err2_1.44.4-2 libcomerr2_1.44.4-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.5-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.8-5 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.10-1 libdconf1_0.30.0-1 libdebconfclient0_0.245 libdevmapper1.02.1_2:1.02.145-4.1 libdns-export1102_1:9.11.4.P2+dfsg-3 libdpkg-perl_1.19.2 libeatmydata1_105-7 libelf1_0.170-0.5 libepoxy0_1.5.3-0.1 libestr0_0.1.10-2.1 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.4-2 libfakeroot_1.23-1 libfastjson4_0.99.8-2 libfdisk1_2.32.1-0.2 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.044-1 libfontconfig1_2.13.1-2 libfreetype6_2.8.1-2 libfribidi0_1.0.5-3 libgcc-4.9-dev_4.9.4-2 libgcc-8-dev_8.2.0-9 libgcc1_1:8.2.0-9 libgcrypt11_1.5.4-3 libgcrypt20_1.8.4-3 libgd3_2.2.5-5 libgdbm-compat4_1.18.1-1 libgdbm3_1.8.3-14 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libkmod2_25-1 libkrb5-3_1.16.1-1 libkrb5support0_1.16.1-1 libksba8_1.3.5-2 liblab-gamut1_2.40.1-5+b1 liblapack3_3.8.0-1+b1 liblcms2-2_2.9-3 libldap-2.4-2_2.4.46+dfsg-5+b1 libldap-common_2.4.46+dfsg-5 liblocale-gettext-perl_1.07-3+b4 liblogging-stdlog0_1.0.6-3 liblognorm5_2.0.5-1 liblsan0_8.2.0-9 libltdl7_2.4.6-6 liblz4-1_1.8.2-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmnl0_1.0.4-2 libmount1_2.32.1-0.2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-1 libmpx2_8.2.0-9 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnetfilter-acct1_1.0.3-2 libnettle6_3.4-1 libnewt0.52_0.52.20-8 libnfnetlink0_1.0.1-3+b1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam-systemd_239-11 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-3 libpangocairo-1.0-0_1.42.4-3 libpangoft2-1.0-0_1.42.4-3 libpathplan4_2.40.1-5+b1 libpcre3_2:8.39-11 libperl5.28_5.28.0-3 libpipeline1_1.5.0-2 libpixman-1-0_0.34.0-2 libpng16-16_1.6.34-2 libpopt0_1.16-11 libprocps3_2:3.3.9-9 libprocps7_2:3.3.15-2 libproxy1v5_0.4.15-3 libpsl5_0.20.2-2 libpython-all-dev_2.7.15-3 libpython-dev_2.7.15-3 libpython-stdlib_2.7.15-3 libpython2-dev_2.7.15-3 libpython2-stdlib_2.7.15-3 libpython2.7_2.7.15-4 libpython2.7-dev_2.7.15-4 libpython2.7-minimal_2.7.15-4 libpython2.7-stdlib_2.7.15-4 libpython3-all-dev_3.6.7-1 libpython3-dev_3.6.7-1 libpython3-stdlib_3.6.7-1 libpython3.6_3.6.7-1 libpython3.6-dev_3.6.7-1 libpython3.6-minimal_3.6.7-1 libpython3.6-stdlib_3.6.7-1 libpython3.7_3.7.1-1 libpython3.7-dev_3.7.1-1 libpython3.7-minimal_3.7.1-1 libpython3.7-stdlib_3.7.1-1 libquadmath0_8.2.0-9 libreadline6_6.3-9 libreadline7_7.0-5 librest-0.7-0_0.8.1-1 librsvg2-2_2.44.8-3 librsvg2-bin_2.44.8-3 librsvg2-common_2.44.8-3 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1+b1 libsemanage-common_2.8-1 libsemanage1_2.8-1+b1 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1+b1 libsm6_2:1.2.2-1+b3 libsmartcols1_2.32.1-0.2 libsoup-gnome2.4-1_2.64.1-3 libsoup2.4-1_2.64.1-3 libsqlite3-0_3.25.3-1 libss2_1.44.4-2 libssl1.0.0_1.0.2d-1 libssl1.1_1.1.1-2 libstdc++-8-dev_8.2.0-9 libstdc++6_8.2.0-9 libsvm-dev_3.21+ds-1.2 libsvm3_3.21+ds-1.2 libsystemd-daemon0_215-18 libsystemd-journal0_215-18 libsystemd-login0_215-18 libsystemd0_239-11 libtasn1-6_4.13-3 libtext-charwidth-perl_0.04-7.1+b1 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.9+git181026-1 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libtsan0_8.2.0-9 libubsan0_7.3.0-30 libubsan1_8.2.0-9 libudev1_239-11 libunistring2_0.9.10-1 libusb-0.1-4_2:0.1.12-32 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.2 libwayland-client0_1.16.0-1 libwayland-cursor0_1.16.0-1 libwayland-egl1_1.16.0-1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwrap0_7.6.q-27 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.13.1-1 libxcb-shm0_1.13.1-1 libxcb1_1.13.1-1 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-2 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxdot4_2.40.1-5+b1 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-1 libxkbcommon0_0.8.2-1 libxml2_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libxtables10_1.4.21-2+b1 libxtables12_1.8.1-2 libzstd1_1.3.5+dfsg-1 linux-libc-dev_4.18.10-2+b1 login_1:4.5-1.1 logrotate_3.14.0-4 lsb-base_9.20170808 m4_1.4.18-1 make_4.2.1-1.2 man-db_2.8.4-3 manpages_4.16-1 mawk_1.3.3-17+b3 mime-support_3.61 mount_2.32.1-0.2 multiarch-support_2.27-8 nano_3.1-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 net-tools_1.60+git20180626.aebd88e-1 netbase_5.4 netcat-traditional_1.10-41.1 nfacct_1.0.2-2 openssl_1.1.1-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.0-3 perl-base_5.28.0-3 perl-modules-5.28_5.28.0-3 pinentry-curses_1.1.0-1+b1 po-debconf_1.0.20 procps_2:3.3.15-2 python_2.7.15-3 python-all_2.7.15-3 python-all-dev_2.7.15-3 python-atomicwrites_1.1.5-2 python-attr_18.2.0-1 python-babel-localedata_2.6.0+dfsg.1-1 python-backports.functools-lru-cache_1.5-1 python-cycler_0.10.0-1 python-dateutil_2.7.3-1 python-decorator_4.3.0-1 python-dev_2.7.15-3 python-funcsigs_1.0.2-4 python-joblib_0.12.5-1 python-kiwisolver_1.0.1-2+b1 python-matplotlib_2.2.2-4+b1 python-matplotlib-data_2.2.2-4 python-matplotlib-doc_2.2.2-4 python-minimal_2.7.15-3 python-more-itertools_4.2.0-1 python-nose_1.3.7-4 python-numpy_1:1.14.5-1+b1 python-numpy-doc_1:1.14.5-1 python-pandas_0.23.3-1 python-pandas-lib_0.23.3-1 python-pil_5.3.0-1 python-pkg-resources_40.5.0-1 python-pluggy_0.8.0-1 python-py_1.7.0-1 python-pyparsing_2.2.0+dfsg1-2 python-pytest_3.6.4-1 python-scipy_1.1.0-2 python-scipy-doc_1.1.0-2 python-setuptools_40.5.0-1 python-six_1.11.0-2 python-subprocess32_3.5.3-1 python-tz_2018.7-1 python2_2.7.15-3 python2-dev_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-4 python2.7-dev_2.7.15-4 python2.7-minimal_2.7.15-4 python3_3.6.7-1 python3-alabaster_0.7.8-1 python3-all_3.6.7-1 python3-all-dev_3.6.7-1 python3-atomicwrites_1.1.5-2 python3-attr_18.2.0-1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-1 python3-cloudpickle_0.5.6-1 python3-cycler_0.10.0-1 python3-dateutil_2.7.3-1 python3-decorator_4.3.0-1 python3-dev_3.6.7-1 python3-distutils_3.7.1-1 python3-doc_3.6.7-1 python3-docutils_0.14+dfsg-3 python3-idna_2.6-1 python3-imagesize_1.0.0-1 python3-jinja2_2.10-1 python3-joblib_0.12.5-1 python3-kiwisolver_1.0.1-2+b1 python3-lib2to3_3.7.1-1 python3-markupsafe_1.0-1+b2 python3-matplotlib_2.2.2-4+b1 python3-minimal_3.6.7-1 python3-more-itertools_4.2.0-1 python3-networkx_2.1-1 python3-nose_1.3.7-4 python3-numpy_1:1.14.5-1+b1 python3-numpydoc_0.7.0-1 python3-packaging_18.0-1 python3-pandas_0.23.3-1 python3-pandas-lib_0.23.3-1 python3-pil_5.3.0-1 python3-pkg-resources_40.5.0-1 python3-pluggy_0.8.0-1 python3-py_1.7.0-1 python3-pygments_2.2.0+dfsg-2 python3-pyparsing_2.2.0+dfsg1-2 python3-pytest_3.6.4-1 python3-pywt_0.5.1-1.1+b3 python3-requests_2.20.0-2 python3-roman_2.0.0-3 python3-scipy_1.1.0-2 python3-setuptools_40.5.0-1 python3-six_1.11.0-2 python3-skimage_0.14.1-2 python3-skimage-lib_0.14.1-2 python3-sphinx_1.7.9-1 python3-sphinx-gallery_0.2.0-1 python3-tz_2018.7-1 python3-urllib3_1.24-1 python3.6_3.6.7-1 python3.6-dev_3.6.7-1 python3.6-doc_3.6.7-1 python3.6-minimal_3.6.7-1 python3.7_3.7.1-1 python3.7-dev_3.7.1-1 python3.7-minimal_3.7.1-1 readline-common_7.0-5 rsyslog_8.39.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-scikit-learn-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 sgml-base_1.29 shared-mime-info_1.10-1 sphinx-common_1.7.9-1 startpar_0.59-4 systemd_239-11 systemd-sysv_239-11 sysv-rc_2.88dsf-59.11 sysvinit-utils_2.88dsf-59.11 tar_1.30+dfsg-2 tasksel_3.47 tasksel-data_3.47 traceroute_1:2.1.0-2 ttf-bitstream-vera_1.10-8 tzdata_2018g-1 ucf_3.0038 udev_239-11 util-linux_2.32.1-0.2 vim-common_2:8.1.0320-1 vim-tiny_2:8.1.0320-1+b1 wget_1.19.5-2 whiptail_0.52.20-8 x11-common_1:7.7+19 xkb-data_2.23.1-1 xml-core_0.18 xxd_2:8.1.0320-1+b1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 8 17:07:44 2018 UTC
gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./scikit-learn_0.20.0+dfsg-2.dsc
dpkg-source: info: extracting scikit-learn in /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg
dpkg-source: info: unpacking scikit-learn_0.20.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking scikit-learn_0.20.0+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0001-BF-skip-test_backend_respected-if-joblib-is-forced-i.patch
dpkg-source: info: applying 0002-BF-TST-skip-test_lr_liblinear_warning-in-joblib-seri.patch
dpkg-source: info: applying deb_no_tinyclues_external_image
dpkg-source: info: applying deb_no_online_jquery
dpkg-source: info: applying up_workaround_buggy_pil
dpkg-source: info: applying deb_skip_some_tests_on_arm
dpkg-source: info: applying deb_use_system_joblib
dpkg-source: info: applying deb_no_google_analytics
dpkg-source: info: applying deb_git_revision_cmd
dpkg-source: info: applying deb_nopaypal
dpkg-source: info: applying 0001-BF-Define-message-since-exception-might-happen-in-in.patch
dpkg-source: info: applying no-download-intersphinx-mapping.patch
dpkg-source: info: applying disable-doctest.patch
dpkg-source: info: applying parallel-cythonize.patch
dpkg-source: info: applying no-buttons-js.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
CCACHE_COMPRESS=1
CCACHE_DIR=/var/cache/ccache
CCACHE_UMASK=002
DEB_BUILD_OPTIONS=parallel=2
HOME=/sbuild-nonexistent
LANG=en_AU.UTF-8
LC_ALL=POSIX
LC_TIME=en_GB.UTF-8
LD_LIBRARY_PATH=/usr/lib/libeatmydata
LD_PRELOAD=libeatmydata.so
LOGNAME=stuart
PATH=/usr/lib/ccache:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg
SCHROOT_ALIAS_NAME=unstable-amd64-sbuild
SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=stuart
SCHROOT_SESSION_ID=sid-amd64-sbuild-6e799c81-4f24-460b-ab64-252c2eb39d31
SCHROOT_UID=1000
SCHROOT_USER=stuart
SHELL=/bin/sh
USER=stuart
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package scikit-learn
dpkg-buildpackage: info: source version 0.20.0+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Yaroslav Halchenko <debian at onerussian.com>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
fakeroot debian/rules clean
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
dh clean --with python2,python3 --buildsystem pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:217: python2.7 setup.py clean
Partial import of sklearn during the build process.
running clean
removing '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build' (and everything under it)
'build/bdist.linux-amd64' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
I: pybuild base:217: python3.7 setup.py clean
running clean
removing '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython3_3.7/build' (and everything under it)
Partial import of sklearn during the build process.
'build/bdist.linux-amd64' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
I: pybuild base:217: python3.6 setup.py clean
running clean
removing '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython3_3.6/build' (and everything under it)
Partial import of sklearn during the build process.
'build/bdist.linux-amd64' does not exist -- can't clean it
'build/scripts-3.6' does not exist -- can't clean it
debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
dh_clean
rm -rf .pytest_cache build scikit_learn.egg-info
mv PKG-INFO-BAK PKG-INFO
mv: cannot stat 'PKG-INFO-BAK': No such file or directory
make[1]: [debian/rules:89: override_dh_clean] Error 1 (ignored)
rm -f debian/build-stamp-*
for i in $(find -name '*.pyx'); do \
rm -f ${i%.*}.c ${i%.*}.cpp; \
done
for i in $(find -name '*.pyx.in'); do \
rm -f ${i%.*}; \
done
/usr/bin/make -C doc clean
make[2]: Entering directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/doc'
rm -rf _build/*
rm -rf auto_examples/
rm -rf generated/*
rm -rf modules/generated/
make[2]: Leaving directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/doc'
make[1]: Leaving directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
dpkg-source -b .
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building scikit-learn using existing ./scikit-learn_0.20.0+dfsg.orig.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: warning: ignoring deletion of file sklearn/_isotonic.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/tree/_splitter.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/tree/_tree.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/tree/_utils.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/tree/_criterion.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/feature_extraction/_hashing.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/decomposition/cdnmf_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/decomposition/_online_lda.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/datasets/_svmlight_format.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/svm/liblinear.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/svm/libsvm_sparse.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/svm/libsvm.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/metrics/pairwise_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/metrics/cluster/expected_mutual_info_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/linear_model/sgd_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/linear_model/cd_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/linear_model/sag_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/neighbors/dist_metrics.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/neighbors/ball_tree.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/neighbors/kd_tree.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/neighbors/quad_tree.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/neighbors/typedefs.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/manifold/_barnes_hut_tsne.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/manifold/_utils.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/__check_build/_check_build.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/weight_vector.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/graph_shortest_path.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/murmurhash.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/_random.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/seq_dataset.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/arrayfuncs.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/fast_dict.cpp, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/lgamma.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/_logistic_sigmoid.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/utils/sparsefuncs_fast.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/ensemble/_gradient_boosting.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/cluster/_k_means_elkan.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/cluster/_k_means.c, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/cluster/_hierarchical.cpp, use --include-removal to override
dpkg-source: warning: ignoring deletion of file sklearn/cluster/_dbscan_inner.cpp, use --include-removal to override
dpkg-source: info: building scikit-learn in scikit-learn_0.20.0+dfsg-2.debian.tar.xz
dpkg-source: info: building scikit-learn in scikit-learn_0.20.0+dfsg-2.dsc
debian/rules build
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
/usr/bin/make -j 1 -f debian/rules _build
make[1]: Entering directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
mv PKG-INFO PKG-INFO-BAK
python3.6 setup.py config
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
customize UnixCCompiler
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
customize UnixCCompiler
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -lf77blas -lcblas -latlas -o _configtest
ATLAS version 3.10.3 built by buildd on Wed Jul 25 10:48:47 UTC 2018:
UNAME : Linux binet 4.9.0-7-amd64 #1 SMP Debian 4.9.110-1 (2018-07-05) x86_64 GNU/Linux
INSTFLG : -1 0 -a 1 -l 1
ARCHDEFS : -DATL_OS_Linux -DATL_ARCH_x86SSE2 -DATL_CPUMHZ=2400 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664
F2CDEFS : -DAdd_ -DF77_INTEGER=int -DStringSunStyle
CACHEEDGE: 1048576
F77 : /usr/bin/gfortran, version GNU Fortran (Debian 8.1.0-12) 8.1.0
F77FLAGS : -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SMC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SMCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SKC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SKCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
success!
removing: _configtest.c _configtest.o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
FOUND:
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
sklearn/manifold/_barnes_hut_tsne.pyx: cannot find cimported module 'sklearn.neighbors'
Compiling sklearn/__check_build/_check_build.pyx because it changed.
Compiling sklearn/cluster/_dbscan_inner.pyx because it changed.
Compiling sklearn/cluster/_hierarchical.pyx because it changed.
Compiling sklearn/cluster/_k_means_elkan.pyx because it changed.
Compiling sklearn/cluster/_k_means.pyx because it changed.
Compiling sklearn/datasets/_svmlight_format.pyx because it changed.
Compiling sklearn/decomposition/_online_lda.pyx because it changed.
Compiling sklearn/decomposition/cdnmf_fast.pyx because it changed.
Compiling sklearn/ensemble/_gradient_boosting.pyx because it changed.
Compiling sklearn/feature_extraction/_hashing.pyx because it changed.
Compiling sklearn/manifold/_utils.pyx because it changed.
Compiling sklearn/manifold/_barnes_hut_tsne.pyx because it changed.
Compiling sklearn/metrics/cluster/expected_mutual_info_fast.pyx because it changed.
Compiling sklearn/metrics/pairwise_fast.pyx because it changed.
Compiling sklearn/neighbors/ball_tree.pyx because it changed.
Compiling sklearn/neighbors/kd_tree.pyx because it changed.
Compiling sklearn/neighbors/dist_metrics.pyx because it changed.
Compiling sklearn/neighbors/typedefs.pyx because it changed.
Compiling sklearn/neighbors/quad_tree.pyx because it changed.
Compiling sklearn/tree/_tree.pyx because it changed.
Compiling sklearn/tree/_splitter.pyx because it changed.
Compiling sklearn/tree/_criterion.pyx because it changed.
Compiling sklearn/tree/_utils.pyx because it changed.
Compiling sklearn/svm/libsvm.pyx because it changed.
Compiling sklearn/svm/liblinear.pyx because it changed.
Compiling sklearn/svm/libsvm_sparse.pyx because it changed.
Compiling sklearn/_isotonic.pyx because it changed.
Compiling sklearn/linear_model/cd_fast.pyx because it changed.
Compiling sklearn/linear_model/sgd_fast.pyx because it changed.
Compiling sklearn/linear_model/sag_fast.pyx because it changed.
Compiling sklearn/utils/sparsefuncs_fast.pyx because it changed.
Compiling sklearn/utils/arrayfuncs.pyx because it changed.
Compiling sklearn/utils/murmurhash.pyx because it changed.
Compiling sklearn/utils/lgamma.pyx because it changed.
Compiling sklearn/utils/graph_shortest_path.pyx because it changed.
Compiling sklearn/utils/fast_dict.pyx because it changed.
Compiling sklearn/utils/seq_dataset.pyx because it changed.
Compiling sklearn/utils/weight_vector.pyx because it changed.
Compiling sklearn/utils/_random.pyx because it changed.
Compiling sklearn/utils/_logistic_sigmoid.pyx because it changed.
Partial import of sklearn during the build process.
/usr/lib/python3.6/distutils/dist.py:261: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
[ 1/40] Cythonizing sklearn/__check_build/_check_build.pyx
[ 2/40] Cythonizing sklearn/_isotonic.pyx
[ 3/40] Cythonizing sklearn/cluster/_dbscan_inner.pyx
[ 4/40] Cythonizing sklearn/cluster/_hierarchical.pyx
[ 5/40] Cythonizing sklearn/cluster/_k_means.pyx
[ 6/40] Cythonizing sklearn/cluster/_k_means_elkan.pyx
[ 7/40] Cythonizing sklearn/datasets/_svmlight_format.pyx
[ 8/40] Cythonizing sklearn/decomposition/_online_lda.pyx
[ 9/40] Cythonizing sklearn/decomposition/cdnmf_fast.pyx
[10/40] Cythonizing sklearn/ensemble/_gradient_boosting.pyx
[11/40] Cythonizing sklearn/feature_extraction/_hashing.pyx
[12/40] Cythonizing sklearn/linear_model/cd_fast.pyx
[13/40] Cythonizing sklearn/linear_model/sag_fast.pyx
[14/40] Cythonizing sklearn/linear_model/sgd_fast.pyx
[15/40] Cythonizing sklearn/manifold/_barnes_hut_tsne.pyx
[16/40] Cythonizing sklearn/manifold/_utils.pyx
[17/40] Cythonizing sklearn/metrics/cluster/expected_mutual_info_fast.pyx
[18/40] Cythonizing sklearn/metrics/pairwise_fast.pyx
[19/40] Cythonizing sklearn/neighbors/ball_tree.pyx
[20/40] Cythonizing sklearn/neighbors/dist_metrics.pyx
[21/40] Cythonizing sklearn/neighbors/kd_tree.pyx
[22/40] Cythonizing sklearn/neighbors/quad_tree.pyx
[23/40] Cythonizing sklearn/neighbors/typedefs.pyx
[24/40] Cythonizing sklearn/svm/liblinear.pyx
[25/40] Cythonizing sklearn/svm/libsvm.pyx
[26/40] Cythonizing sklearn/svm/libsvm_sparse.pyx
[27/40] Cythonizing sklearn/tree/_criterion.pyx
[28/40] Cythonizing sklearn/tree/_splitter.pyx
[29/40] Cythonizing sklearn/tree/_tree.pyx
[30/40] Cythonizing sklearn/tree/_utils.pyx
[31/40] Cythonizing sklearn/utils/_logistic_sigmoid.pyx
[32/40] Cythonizing sklearn/utils/_random.pyx
[33/40] Cythonizing sklearn/utils/arrayfuncs.pyx
[34/40] Cythonizing sklearn/utils/fast_dict.pyx
[35/40] Cythonizing sklearn/utils/graph_shortest_path.pyx
[36/40] Cythonizing sklearn/utils/lgamma.pyx
[37/40] Cythonizing sklearn/utils/murmurhash.pyx
[38/40] Cythonizing sklearn/utils/seq_dataset.pyx
[39/40] Cythonizing sklearn/utils/sparsefuncs_fast.pyx
[40/40] Cythonizing sklearn/utils/weight_vector.pyx
running config
mv PKG-INFO-BAK PKG-INFO
touch debian/build-stamp-pyx
PYBUILD_INTERPRETERS=python{version} PYBUILD_VERSIONS=2.7 dh build-arch --with python2 --buildsystem pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:217: python2.7 setup.py config
Partial import of sklearn during the build process.
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
customize UnixCCompiler
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
customize UnixCCompiler
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -L/usr/lib/x86_64-linux-gnu -lf77blas -lcblas -latlas -o _configtest
ATLAS version 3.10.3 built by buildd on Wed Jul 25 10:48:47 UTC 2018:
UNAME : Linux binet 4.9.0-7-amd64 #1 SMP Debian 4.9.110-1 (2018-07-05) x86_64 GNU/Linux
INSTFLG : -1 0 -a 1 -l 1
ARCHDEFS : -DATL_OS_Linux -DATL_ARCH_x86SSE2 -DATL_CPUMHZ=2400 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664
F2CDEFS : -DAdd_ -DF77_INTEGER=int -DStringSunStyle
CACHEEDGE: 1048576
F77 : /usr/bin/gfortran, version GNU Fortran (Debian 8.1.0-12) 8.1.0
F77FLAGS : -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SMC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SMCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SKC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SKCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
success!
removing: _configtest.c _configtest.o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
FOUND:
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python setup.py build
Partial import of sklearn during the build process.
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
blas_opt_info:
blas_mkl_info:
customize UnixCCompiler
libraries mkl_rt not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
blis_info:
customize UnixCCompiler
libraries blis not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:
customize UnixCCompiler
customize UnixCCompiler
libraries openblas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries tatlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_3_10_blas_info:
customize UnixCCompiler
libraries satlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_threads_info:
Setting PTATLAS=ATLAS
customize UnixCCompiler
libraries ptf77blas,ptcblas,atlas not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu/atlas', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
atlas_blas_info:
customize UnixCCompiler
get_default_fcompiler: matching types: '['gnu95', 'intel', 'lahey', 'pg', 'absoft', 'nag', 'vast', 'compaq', 'intele', 'intelem', 'gnu', 'g95', 'pathf95', 'nagfor']'
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize IntelFCompiler
Could not locate executable ifort
Could not locate executable ifc
customize LaheyFCompiler
Could not locate executable lf95
customize PGroupFCompiler
Could not locate executable pgfortran
customize AbsoftFCompiler
Could not locate executable f90
Could not locate executable f77
customize NAGFCompiler
customize VastFCompiler
customize CompaqFCompiler
Could not locate executable fort
customize IntelItaniumFCompiler
Could not locate executable efort
Could not locate executable efc
customize IntelEM64TFCompiler
customize GnuFCompiler
Could not locate executable g77
customize G95FCompiler
Could not locate executable g95
customize PathScaleFCompiler
Could not locate executable pathf95
customize NAGFORCompiler
Could not locate executable nagfor
don't know how to compile Fortran code on platform 'posix'
compiling '_configtest.c':
/* This file is generated from numpy/distutils/system_info.py */
void ATL_buildinfo(void);
int main(void) {
ATL_buildinfo();
return 0;
}
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-c'
x86_64-linux-gnu-gcc: _configtest.c
x86_64-linux-gnu-gcc -pthread _configtest.o -L/usr/lib/x86_64-linux-gnu -lf77blas -lcblas -latlas -o _configtest
ATLAS version 3.10.3 built by buildd on Wed Jul 25 10:48:47 UTC 2018:
UNAME : Linux binet 4.9.0-7-amd64 #1 SMP Debian 4.9.110-1 (2018-07-05) x86_64 GNU/Linux
INSTFLG : -1 0 -a 1 -l 1
ARCHDEFS : -DATL_OS_Linux -DATL_ARCH_x86SSE2 -DATL_CPUMHZ=2400 -DATL_SSE2 -DATL_SSE1 -DATL_USE64BITS -DATL_GAS_x8664
F2CDEFS : -DAdd_ -DF77_INTEGER=int -DStringSunStyle
CACHEEDGE: 1048576
F77 : /usr/bin/gfortran, version GNU Fortran (Debian 8.1.0-12) 8.1.0
F77FLAGS : -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SMC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SMCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
SKC : /usr/bin/gcc, version gcc (Debian 8.1.0-12) 8.1.0
SKCFLAGS : -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/atlas-cewjNG/atlas-3.10.3=. -fstack-protector-strong -m64 -fPIC
success!
removing: _configtest.c _configtest.o _configtest
customize UnixCCompiler
customize UnixCCompiler
FOUND:
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
FOUND:
libraries = ['f77blas', 'cblas', 'atlas', 'f77blas', 'cblas']
library_dirs = ['/usr/lib/x86_64-linux-gnu']
language = c
define_macros = [('HAVE_CBLAS', None), ('ATLAS_INFO', '"\\"3.10.3\\""')]
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building library "libsvm-skl" sources
building extension "sklearn.__check_build._check_build" sources
building extension "sklearn.cluster._dbscan_inner" sources
building extension "sklearn.cluster._hierarchical" sources
building extension "sklearn.cluster._k_means_elkan" sources
building extension "sklearn.cluster._k_means" sources
building extension "sklearn.datasets._svmlight_format" sources
building extension "sklearn.decomposition._online_lda" sources
building extension "sklearn.decomposition.cdnmf_fast" sources
building extension "sklearn.ensemble._gradient_boosting" sources
building extension "sklearn.feature_extraction._hashing" sources
building extension "sklearn.manifold._utils" sources
building extension "sklearn.manifold._barnes_hut_tsne" sources
building extension "sklearn.metrics.cluster.expected_mutual_info_fast" sources
building extension "sklearn.metrics.pairwise_fast" sources
building extension "sklearn.neighbors.ball_tree" sources
building extension "sklearn.neighbors.kd_tree" sources
building extension "sklearn.neighbors.dist_metrics" sources
building extension "sklearn.neighbors.typedefs" sources
building extension "sklearn.neighbors.quad_tree" sources
building extension "sklearn.tree._tree" sources
building extension "sklearn.tree._splitter" sources
building extension "sklearn.tree._criterion" sources
building extension "sklearn.tree._utils" sources
building extension "sklearn.svm.libsvm" sources
building extension "sklearn.svm.liblinear" sources
building extension "sklearn.svm.libsvm_sparse" sources
building extension "sklearn._isotonic" sources
building extension "sklearn.linear_model.cd_fast" sources
building extension "sklearn.linear_model.sgd_fast" sources
building extension "sklearn.linear_model.sag_fast" sources
building extension "sklearn.utils.sparsefuncs_fast" sources
building extension "sklearn.utils.arrayfuncs" sources
building extension "sklearn.utils.murmurhash" sources
building extension "sklearn.utils.lgamma" sources
building extension "sklearn.utils.graph_shortest_path" sources
building extension "sklearn.utils.fast_dict" sources
building extension "sklearn.utils.seq_dataset" sources
building extension "sklearn.utils.weight_vector" sources
building extension "sklearn.utils._random" sources
building extension "sklearn.utils._logistic_sigmoid" sources
building data_files sources
build_src: building npy-pkg config files
running build_py
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creating /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/gaussian_process
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copying sklearn/utils/mocking.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/graph.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/class_weight.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/multiclass.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/__init__.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/sparsefuncs.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/linear_assignment_.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/bench.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/setup.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/optimize.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/_scipy_sparse_lsqr_backport.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/stats.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
copying sklearn/utils/_joblib.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils
creating /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsetools
copying sklearn/utils/sparsetools/__init__.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsetools
copying sklearn/utils/sparsetools/setup.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsetools
creating /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsetools/tests
copying sklearn/utils/sparsetools/tests/__init__.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsetools/tests
creating /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_sparsefuncs.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_bench.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_estimator_checks.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_fixes.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_class_weight.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_validation.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_show_versions.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_random.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_multiclass.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_utils.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_extmath.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_deprecation.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/__init__.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_optimize.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_murmurhash.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_linear_assignment.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_seq_dataset.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_testing.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_graph.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_stats.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_fast_dict.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_metaestimators.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
copying sklearn/utils/tests/test_shortest_path.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/tests
creating /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_impute.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_naive_bayes.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_pipeline.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_calibration.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_random_projection.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_multioutput.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_dummy.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_check_build.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_multiclass.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_kernel_ridge.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_site_joblib.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_isotonic.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_discriminant_analysis.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_common.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/__init__.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_docstring_parameters.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_config.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_base.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_kernel_approximation.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_init.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
copying sklearn/tests/test_metaestimators.py -> /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests
running build_clib
customize UnixCCompiler
customize UnixCCompiler using build_clib
building 'libsvm-skl' library
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build
creating build/temp.linux-amd64-2.7
creating build/temp.linux-amd64-2.7/sklearn
creating build/temp.linux-amd64-2.7/sklearn/svm
creating build/temp.linux-amd64-2.7/sklearn/svm/src
creating build/temp.linux-amd64-2.7/sklearn/svm/src/libsvm
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -c'
x86_64-linux-gnu-g++: sklearn/svm/src/libsvm/libsvm_template.cpp
x86_64-linux-gnu-gcc-ar: adding 1 object files to build/temp.linux-amd64-2.7/liblibsvm-skl.a
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
resetting extension 'sklearn.svm.liblinear' language from 'c' to 'c++'.
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'sklearn.__check_build._check_build' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/__check_build
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/__check_build/_check_build.c
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/__check_build/_check_build.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/__check_build/_check_build.so
building 'sklearn.cluster._dbscan_inner' extension
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/cluster
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-g++: sklearn/cluster/_dbscan_inner.cpp
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/cluster/_dbscan_inner.cpp:606:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/cluster/_dbscan_inner.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/cluster/_dbscan_inner.so
building 'sklearn.cluster._hierarchical' extension
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-g++: sklearn/cluster/_hierarchical.cpp
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/cluster/_hierarchical.cpp:604:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/cluster/_hierarchical.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/cluster/_hierarchical.so
building 'sklearn.cluster._k_means_elkan' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/cluster/_k_means_elkan.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/cluster/_k_means_elkan.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/cluster/_k_means_elkan.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/cluster/_k_means_elkan.so
building 'sklearn.cluster._k_means' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/cluster/_k_means.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/cluster/_k_means.c:611:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/cluster/_k_means.c: In function '__pyx_fuse_0__pyx_f_7sklearn_7cluster_8_k_means__assign_labels_array':
sklearn/cluster/_k_means.c:3787:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/cluster/_k_means.c: In function '__pyx_fuse_1__pyx_f_7sklearn_7cluster_8_k_means__assign_labels_array':
sklearn/cluster/_k_means.c:4590:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
sklearn/cluster/_k_means.c: In function '__pyx_fuse_0__pyx_f_7sklearn_7cluster_8_k_means__assign_labels_csr':
sklearn/cluster/_k_means.c:5976:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/cluster/_k_means.c: In function '__pyx_fuse_1__pyx_f_7sklearn_7cluster_8_k_means__assign_labels_csr':
sklearn/cluster/_k_means.c:6846:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/cluster/_k_means.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/cluster/_k_means.so
building 'sklearn.datasets._svmlight_format' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/datasets
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/datasets/_svmlight_format.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/datasets/_svmlight_format.c:587:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/datasets/_svmlight_format.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/datasets/_svmlight_format.so
building 'sklearn.decomposition._online_lda' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/decomposition
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/decomposition/_online_lda.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/decomposition/_online_lda.c:590:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/decomposition/_online_lda.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/decomposition/_online_lda.so
building 'sklearn.decomposition.cdnmf_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/decomposition/cdnmf_fast.c
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/decomposition/cdnmf_fast.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/decomposition/cdnmf_fast.so
building 'sklearn.ensemble._gradient_boosting' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/ensemble
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/ensemble/_gradient_boosting.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/ensemble/_gradient_boosting.c:587:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/ensemble/_gradient_boosting.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/ensemble/_gradient_boosting.so
building 'sklearn.feature_extraction._hashing' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/feature_extraction
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/feature_extraction/_hashing.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/feature_extraction/_hashing.c:591:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/feature_extraction/_hashing.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/feature_extraction/_hashing.so
building 'sklearn.manifold._utils' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/manifold
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O3'
x86_64-linux-gnu-gcc: sklearn/manifold/_utils.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/manifold/_utils.c:594:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/manifold/_utils.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/manifold/_utils.so
building 'sklearn.manifold._barnes_hut_tsne' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O4'
x86_64-linux-gnu-gcc: sklearn/manifold/_barnes_hut_tsne.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/manifold/_barnes_hut_tsne.c:613:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/manifold/_barnes_hut_tsne.c: In function '__pyx_f_7sklearn_8manifold_16_barnes_hut_tsne_compute_gradient_negative':
sklearn/manifold/_barnes_hut_tsne.c:3521:9: warning: variable '__pyx_v_force' set but not used [-Wunused-but-set-variable]
float __pyx_v_force[3];
^~~~~~~~~~~~~
sklearn/manifold/_barnes_hut_tsne.c:3520:9: warning: variable '__pyx_v_iQ' set but not used [-Wunused-but-set-variable]
float __pyx_v_iQ[1];
^~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/manifold/_barnes_hut_tsne.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/manifold/_barnes_hut_tsne.so
building 'sklearn.metrics.cluster.expected_mutual_info_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/metrics
creating build/temp.linux-amd64-2.7/sklearn/metrics/cluster
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/metrics/cluster/expected_mutual_info_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/metrics/cluster/expected_mutual_info_fast.c:590:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/metrics/cluster/expected_mutual_info_fast.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/metrics/cluster/expected_mutual_info_fast.so
building 'sklearn.metrics.pairwise_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/metrics/pairwise_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/metrics/pairwise_fast.c:610:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/metrics/pairwise_fast.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/metrics/pairwise_fast.so
building 'sklearn.neighbors.ball_tree' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/neighbors
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/neighbors/ball_tree.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/neighbors/ball_tree.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/neighbors/ball_tree.c: In function '__pyx_f_7sklearn_9neighbors_9ball_tree_10BinaryTree__recursive_build':
sklearn/neighbors/ball_tree.c:24120:82: warning: '__pyx_v_sample_weight' may be used uninitialized in this function [-Wmaybe-uninitialized]
__pyx_v_sum_weight_node = (__pyx_v_sum_weight_node + (__pyx_v_sample_weight[(__pyx_v_idx_array[__pyx_v_i])]));
^
sklearn/neighbors/ball_tree.c:23942:50: note: '__pyx_v_sample_weight' was declared here
__pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_sample_weight;
^~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/ball_tree.c: In function '__pyx_f_7sklearn_9neighbors_9ball_tree_10BinaryTree__kde_single_depthfirst':
sklearn/neighbors/ball_tree.c:21111:63: warning: '__pyx_v_sample_weight' may be used uninitialized in this function [-Wmaybe-uninitialized]
__pyx_t_13 = PyFloat_FromDouble((__pyx_v_sample_weight[(__pyx_v_idx_array[__pyx_v_i])])); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2363, __pyx_L1_error)
^
sklearn/neighbors/ball_tree.c: In function '__pyx_f_7sklearn_9neighbors_9ball_tree_10BinaryTree__kde_single_breadthfirst':
sklearn/neighbors/ball_tree.c:20390:65: warning: '__pyx_v_sample_weight' may be used uninitialized in this function [-Wmaybe-uninitialized]
__pyx_t_13 = PyFloat_FromDouble((__pyx_v_sample_weight[(__pyx_v_idx_array[__pyx_v_i])])); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2228, __pyx_L1_error)
^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/neighbors/ball_tree.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/neighbors/ball_tree.so
building 'sklearn.neighbors.kd_tree' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/neighbors/kd_tree.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/neighbors/kd_tree.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/neighbors/kd_tree.c: In function '__pyx_f_7sklearn_9neighbors_7kd_tree_10BinaryTree__kde_single_depthfirst':
sklearn/neighbors/kd_tree.c:21082:63: warning: '__pyx_v_sample_weight' may be used uninitialized in this function [-Wmaybe-uninitialized]
__pyx_t_13 = PyFloat_FromDouble((__pyx_v_sample_weight[(__pyx_v_idx_array[__pyx_v_i])])); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2363, __pyx_L1_error)
^
sklearn/neighbors/kd_tree.c: In function '__pyx_f_7sklearn_9neighbors_7kd_tree_10BinaryTree__kde_single_breadthfirst':
sklearn/neighbors/kd_tree.c:20361:65: warning: '__pyx_v_sample_weight' may be used uninitialized in this function [-Wmaybe-uninitialized]
__pyx_t_13 = PyFloat_FromDouble((__pyx_v_sample_weight[(__pyx_v_idx_array[__pyx_v_i])])); if (unlikely(!__pyx_t_13)) __PYX_ERR(0, 2228, __pyx_L1_error)
^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/neighbors/kd_tree.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/neighbors/kd_tree.so
building 'sklearn.neighbors.dist_metrics' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include/numpy -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/neighbors/dist_metrics.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/neighbors/dist_metrics.c:590:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/neighbors/dist_metrics.c: In function '__pyx_f_7sklearn_9neighbors_12dist_metrics_18SEuclideanDistance_dist':
sklearn/neighbors/dist_metrics.c:7041:86: warning: passing argument 1 of '__pyx_f_7sklearn_9neighbors_12dist_metrics_18SEuclideanDistance_rdist' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_1 = __pyx_f_7sklearn_9neighbors_12dist_metrics_18SEuclideanDistance_rdist(((struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *)__pyx_v_self), __pyx_v_x1, __pyx_v_x2, __pyx_v_size); if (unlikely(__pyx_t_1 == ((__pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t)-1.0))) __PYX_ERR(1, 463, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c:6844:196: note: expected 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_SEuclideanDistance *' but argument is of type 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *'
static __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t __pyx_f_7sklearn_9neighbors_12dist_metrics_18SEuclideanDistance_rdist(struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_SEuclideanDistance *__pyx_v_self, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x1, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x2, __pyx_t_7sklearn_9neighbors_8typedefs_ITYPE_t __pyx_v_size) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c: In function '__pyx_f_7sklearn_9neighbors_12dist_metrics_17MinkowskiDistance_dist':
sklearn/neighbors/dist_metrics.c:7859:85: warning: passing argument 1 of '__pyx_f_7sklearn_9neighbors_12dist_metrics_17MinkowskiDistance_rdist' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_1 = __pyx_f_7sklearn_9neighbors_12dist_metrics_17MinkowskiDistance_rdist(((struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *)__pyx_v_self), __pyx_v_x1, __pyx_v_x2, __pyx_v_size); if (unlikely(__pyx_t_1 == ((__pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t)-1.0))) __PYX_ERR(1, 552, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c:7778:194: note: expected 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_MinkowskiDistance *' but argument is of type 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *'
static __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t __pyx_f_7sklearn_9neighbors_12dist_metrics_17MinkowskiDistance_rdist(struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_MinkowskiDistance *__pyx_v_self, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x1, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x2, __pyx_t_7sklearn_9neighbors_8typedefs_ITYPE_t __pyx_v_size) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c: In function '__pyx_f_7sklearn_9neighbors_12dist_metrics_18WMinkowskiDistance_dist':
sklearn/neighbors/dist_metrics.c:8564:86: warning: passing argument 1 of '__pyx_f_7sklearn_9neighbors_12dist_metrics_18WMinkowskiDistance_rdist' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_1 = __pyx_f_7sklearn_9neighbors_12dist_metrics_18WMinkowskiDistance_rdist(((struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *)__pyx_v_self), __pyx_v_x1, __pyx_v_x2, __pyx_v_size); if (unlikely(__pyx_t_1 == ((__pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t)-1.0))) __PYX_ERR(1, 611, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c:8377:196: note: expected 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_WMinkowskiDistance *' but argument is of type 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *'
static __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t __pyx_f_7sklearn_9neighbors_12dist_metrics_18WMinkowskiDistance_rdist(struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_WMinkowskiDistance *__pyx_v_self, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x1, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x2, __pyx_t_7sklearn_9neighbors_8typedefs_ITYPE_t __pyx_v_size) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c: In function '__pyx_f_7sklearn_9neighbors_12dist_metrics_19MahalanobisDistance_dist':
sklearn/neighbors/dist_metrics.c:9432:87: warning: passing argument 1 of '__pyx_f_7sklearn_9neighbors_12dist_metrics_19MahalanobisDistance_rdist' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_1 = __pyx_f_7sklearn_9neighbors_12dist_metrics_19MahalanobisDistance_rdist(((struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *)__pyx_v_self), __pyx_v_x1, __pyx_v_x2, __pyx_v_size); if (unlikely(__pyx_t_1 == ((__pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t)-1.0))) __PYX_ERR(1, 684, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/dist_metrics.c:9187:198: note: expected 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_MahalanobisDistance *' but argument is of type 'struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_DistanceMetric *'
static __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t __pyx_f_7sklearn_9neighbors_12dist_metrics_19MahalanobisDistance_rdist(struct __pyx_obj_7sklearn_9neighbors_12dist_metrics_MahalanobisDistance *__pyx_v_self, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x1, __pyx_t_7sklearn_9neighbors_8typedefs_DTYPE_t *__pyx_v_x2, __pyx_t_7sklearn_9neighbors_8typedefs_ITYPE_t __pyx_v_size) {
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/neighbors/dist_metrics.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/neighbors/dist_metrics.so
building 'sklearn.neighbors.typedefs' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/neighbors/typedefs.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/neighbors/typedefs.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/neighbors/typedefs.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/neighbors/typedefs.so
building 'sklearn.neighbors.quad_tree' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/neighbors/quad_tree.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/neighbors/quad_tree.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/neighbors/quad_tree.c: In function '__pyx_f_7sklearn_9neighbors_9quad_tree_9_QuadTree__get_cell_ndarray':
sklearn/neighbors/quad_tree.c:7186:37: warning: passing argument 1 of '(PyObject * (*)(PyTypeObject *, PyArray_Descr *, int, npy_intp *, npy_intp *, void *, int, PyObject *))*(PyArray_API + 752)' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_2 = PyArray_NewFromDescr(((PyObject *)__pyx_ptype_5numpy_ndarray), ((PyArray_Descr *)__pyx_t_1), 1, __pyx_v_shape, __pyx_v_strides, ((void *)__pyx_v_self->cells), NPY_DEFAULT, Py_None); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 574, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/neighbors/quad_tree.c:7186:37: note: expected 'PyTypeObject *' {aka 'struct _typeobject *'} but argument is of type 'PyObject *' {aka 'struct _object *'}
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/neighbors/quad_tree.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/neighbors/quad_tree.so
building 'sklearn.tree._tree' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/tree
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O3'
x86_64-linux-gnu-gcc: sklearn/tree/_tree.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/tree/_tree.c:592:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/tree/_tree.c: In function '__pyx_f_7sklearn_4tree_5_tree_4Tree__get_node_ndarray':
sklearn/tree/_tree.c:14971:37: warning: passing argument 1 of '(PyObject * (*)(PyTypeObject *, PyArray_Descr *, int, npy_intp *, npy_intp *, void *, int, PyObject *))*(PyArray_API + 752)' from incompatible pointer type [-Wincompatible-pointer-types]
__pyx_t_2 = PyArray_NewFromDescr(((PyObject *)__pyx_ptype_5numpy_ndarray), ((PyArray_Descr *)__pyx_t_1), 1, __pyx_v_shape, __pyx_v_strides, ((void *)__pyx_v_self->nodes), NPY_DEFAULT, Py_None); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 1123, __pyx_L1_error)
~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/tree/_tree.c:14971:37: note: expected 'PyTypeObject *' {aka 'struct _typeobject *'} but argument is of type 'PyObject *' {aka 'struct _object *'}
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/tree/_tree.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tree/_tree.so
building 'sklearn.tree._splitter' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O3'
x86_64-linux-gnu-gcc: sklearn/tree/_splitter.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/tree/_splitter.c:592:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/tree/_splitter.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tree/_splitter.so
building 'sklearn.tree._criterion' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O3'
x86_64-linux-gnu-gcc: sklearn/tree/_criterion.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/tree/_criterion.c:592:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/tree/_criterion.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tree/_criterion.so
building 'sklearn.tree._utils' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
extra options: '-O3'
x86_64-linux-gnu-gcc: sklearn/tree/_utils.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/tree/_utils.c:592:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/tree/_utils.c: In function '__pyx_f_7sklearn_4tree_6_utils_24WeightedMedianCalculator_remove':
sklearn/tree/_utils.c:9195:11: warning: '__pyx_v_original_median' may be used uninitialized in this function [-Wmaybe-uninitialized]
(void)(((struct __pyx_vtabstruct_7sklearn_4tree_6_utils_WeightedMedianCalculator *)__pyx_v_self->__pyx_vtab)->update_median_parameters_post_remove(__pyx_v_self, __pyx_v_data, __pyx_v_weight, __pyx_v_original_median));
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/tree/_utils.c: In function '__pyx_f_7sklearn_4tree_6_utils_24WeightedMedianCalculator_pop':
sklearn/tree/_utils.c:9307:11: warning: '__pyx_v_original_median' may be used uninitialized in this function [-Wmaybe-uninitialized]
(void)(((struct __pyx_vtabstruct_7sklearn_4tree_6_utils_WeightedMedianCalculator *)__pyx_v_self->__pyx_vtab)->update_median_parameters_post_remove(__pyx_v_self, (__pyx_v_data[0]), (__pyx_v_weight[0]), __pyx_v_original_median));
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
sklearn/tree/_utils.c: In function '__pyx_f_7sklearn_4tree_6_utils_24WeightedMedianCalculator_push':
sklearn/tree/_utils.c:8839:11: warning: '__pyx_v_original_median' may be used uninitialized in this function [-Wmaybe-uninitialized]
(void)(((struct __pyx_vtabstruct_7sklearn_4tree_6_utils_WeightedMedianCalculator *)__pyx_v_self->__pyx_vtab)->update_median_parameters_post_push(__pyx_v_self, __pyx_v_data, __pyx_v_weight, __pyx_v_original_median));
~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/tree/_utils.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tree/_utils.so
building 'sklearn.svm.libsvm' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -Isklearn/svm/src/libsvm -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/svm/libsvm.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/svm/libsvm.c:594:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/svm/libsvm.o -Lbuild/temp.linux-amd64-2.7 -llibsvm-skl -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/svm/libsvm.so
building 'sklearn.svm.liblinear' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/svm/liblinear.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/svm/liblinear.c:616:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
In file included from sklearn/svm/liblinear.c:619:
sklearn/svm/src/liblinear/liblinear_helper.c: In function 'set_problem':
sklearn/svm/src/liblinear/liblinear_helper.c:145:28: warning: assignment to 'double *' from incompatible pointer type 'char *' [-Wincompatible-pointer-types]
problem->sample_weight = sample_weight;
^
sklearn/svm/src/liblinear/liblinear_helper.c: In function 'csr_set_problem':
sklearn/svm/src/liblinear/liblinear_helper.c:174:28: warning: assignment to 'double *' from incompatible pointer type 'char *' [-Wincompatible-pointer-types]
problem->sample_weight = sample_weight;
^
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/svm/src/liblinear
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-g++: sklearn/svm/src/liblinear/linear.cpp
sklearn/svm/src/liblinear/linear.cpp: In function 'model* train(const problem*, const parameter*)':
sklearn/svm/src/liblinear/linear.cpp:2370:6: warning: unused variable 'n_iter' [-Wunused-variable]
int n_iter;
^~~~~~
x86_64-linux-gnu-g++: sklearn/svm/src/liblinear/tron.cpp
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/svm/liblinear.o build/temp.linux-amd64-2.7/sklearn/svm/src/liblinear/tron.o build/temp.linux-amd64-2.7/sklearn/svm/src/liblinear/linear.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/svm/liblinear.so
building 'sklearn.svm.libsvm_sparse' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -Isklearn/svm/src/libsvm -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/svm/libsvm_sparse.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/svm/libsvm_sparse.c:592:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/svm/libsvm_sparse.o -Lbuild/temp.linux-amd64-2.7 -llibsvm-skl -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/svm/libsvm_sparse.so
building 'sklearn._isotonic' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/_isotonic.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/_isotonic.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/_isotonic.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/_isotonic.so
building 'sklearn.linear_model.cd_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/linear_model
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/linear_model/cd_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/linear_model/cd_fast.c:611:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_8enet_coordinate_descent':
sklearn/linear_model/cd_fast.c:4929:16: warning: assignment to 'void (*)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const enum CBLAS_TRANSPOSE, const int, const int, const float, const float *, const int, const float *, const int, const float, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_gemv = cblas_sgemv;
^
sklearn/linear_model/cd_fast.c:4938:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/linear_model/cd_fast.c:4947:16: warning: assignment to 'void (*)(int, float, float *, int, float *, int)' from incompatible pointer type 'void (*)(const int, const float, const float *, const int, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_axpy = cblas_saxpy;
^
sklearn/linear_model/cd_fast.c:4956:16: warning: assignment to 'float (*)(int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_sasum;
^
sklearn/linear_model/cd_fast.c:4965:16: warning: assignment to 'void (*)(int, float *, int, float *, int)' from incompatible pointer type 'void (*)(const int, const float *, const int, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_copy = cblas_scopy;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_10enet_coordinate_descent':
sklearn/linear_model/cd_fast.c:6337:16: warning: assignment to 'void (*)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const enum CBLAS_TRANSPOSE, const int, const int, const double, const double *, const int, const double *, const int, const double, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_gemv = cblas_dgemv;
^
sklearn/linear_model/cd_fast.c:6346:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
sklearn/linear_model/cd_fast.c:6355:16: warning: assignment to 'void (*)(int, double, double *, int, double *, int)' from incompatible pointer type 'void (*)(const int, const double, const double *, const int, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_axpy = cblas_daxpy;
^
sklearn/linear_model/cd_fast.c:6364:16: warning: assignment to 'double (*)(int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_dasum;
^
sklearn/linear_model/cd_fast.c:6373:16: warning: assignment to 'void (*)(int, double *, int, double *, int)' from incompatible pointer type 'void (*)(const int, const double *, const int, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_copy = cblas_dcopy;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_14sparse_enet_coordinate_descent':
sklearn/linear_model/cd_fast.c:8426:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/linear_model/cd_fast.c:8435:16: warning: assignment to 'float (*)(int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_sasum;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_16sparse_enet_coordinate_descent':
sklearn/linear_model/cd_fast.c:10410:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
sklearn/linear_model/cd_fast.c:10419:16: warning: assignment to 'double (*)(int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_dasum;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_20enet_coordinate_descent_gram':
sklearn/linear_model/cd_fast.c:12765:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/linear_model/cd_fast.c:12774:16: warning: assignment to 'void (*)(int, float, float *, int, float *, int)' from incompatible pointer type 'void (*)(const int, const float, const float *, const int, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_axpy = cblas_saxpy;
^
sklearn/linear_model/cd_fast.c:12783:16: warning: assignment to 'float (*)(int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_sasum;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_22enet_coordinate_descent_gram':
sklearn/linear_model/cd_fast.c:14297:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
sklearn/linear_model/cd_fast.c:14306:16: warning: assignment to 'void (*)(int, double, double *, int, double *, int)' from incompatible pointer type 'void (*)(const int, const double, const double *, const int, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_axpy = cblas_daxpy;
^
sklearn/linear_model/cd_fast.c:14315:16: warning: assignment to 'double (*)(int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_dasum;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_26enet_coordinate_descent_multi_task':
sklearn/linear_model/cd_fast.c:16312:15: warning: assignment to 'float (*)(int, float *, int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_sdot;
^
sklearn/linear_model/cd_fast.c:16321:16: warning: assignment to 'float (*)(int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_nrm2 = cblas_snrm2;
^
sklearn/linear_model/cd_fast.c:16330:16: warning: assignment to 'float (*)(int, float *, int)' from incompatible pointer type 'float (*)(const int, const float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_sasum;
^
sklearn/linear_model/cd_fast.c:16339:16: warning: assignment to 'void (*)(int, float *, int, float *, int)' from incompatible pointer type 'void (*)(const int, const float *, const int, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_copy = cblas_scopy;
^
sklearn/linear_model/cd_fast.c:16357:15: warning: assignment to 'void (*)(enum CBLAS_ORDER, int, int, float, float *, int, float *, int, float *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const int, const int, const float, const float *, const int, const float *, const int, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_ger = cblas_sger;
^
sklearn/linear_model/cd_fast.c:16366:16: warning: assignment to 'void (*)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, float, float *, int, float *, int, float, float *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const enum CBLAS_TRANSPOSE, const int, const int, const float, const float *, const int, const float *, const int, const float, float *, const int)' [-Wincompatible-pointer-types]
__pyx_v_gemv = cblas_sgemv;
^
sklearn/linear_model/cd_fast.c: In function '__pyx_pf_7sklearn_12linear_model_7cd_fast_28enet_coordinate_descent_multi_task':
sklearn/linear_model/cd_fast.c:18049:15: warning: assignment to 'double (*)(int, double *, int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_dot = cblas_ddot;
^
sklearn/linear_model/cd_fast.c:18058:16: warning: assignment to 'double (*)(int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_nrm2 = cblas_dnrm2;
^
sklearn/linear_model/cd_fast.c:18067:16: warning: assignment to 'double (*)(int, double *, int)' from incompatible pointer type 'double (*)(const int, const double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_asum = cblas_dasum;
^
sklearn/linear_model/cd_fast.c:18076:16: warning: assignment to 'void (*)(int, double *, int, double *, int)' from incompatible pointer type 'void (*)(const int, const double *, const int, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_copy = cblas_dcopy;
^
sklearn/linear_model/cd_fast.c:18094:15: warning: assignment to 'void (*)(enum CBLAS_ORDER, int, int, double, double *, int, double *, int, double *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const int, const int, const double, const double *, const int, const double *, const int, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_ger = cblas_dger;
^
sklearn/linear_model/cd_fast.c:18103:16: warning: assignment to 'void (*)(enum CBLAS_ORDER, enum CBLAS_TRANSPOSE, int, int, double, double *, int, double *, int, double, double *, int)' from incompatible pointer type 'void (*)(const enum CBLAS_ORDER, const enum CBLAS_TRANSPOSE, const int, const int, const double, const double *, const int, const double *, const int, const double, double *, const int)' [-Wincompatible-pointer-types]
__pyx_v_gemv = cblas_dgemv;
^
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/linear_model/cd_fast.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/linear_model/cd_fast.so
building 'sklearn.linear_model.sgd_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/linear_model/sgd_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/linear_model/sgd_fast.c:613:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/linear_model/sgd_fast.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/linear_model/sgd_fast.so
building 'sklearn.linear_model.sag_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/linear_model/sag_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/linear_model/sag_fast.c:588:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/linear_model/sag_fast.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/linear_model/sag_fast.so
building 'sklearn.utils.sparsefuncs_fast' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/utils
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/sparsefuncs_fast.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/sparsefuncs_fast.c:584:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/sparsefuncs_fast.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/sparsefuncs_fast.so
building 'sklearn.utils.arrayfuncs' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/arrayfuncs.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/arrayfuncs.c:611:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/arrayfuncs.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/arrayfuncs.so
building 'sklearn.utils.murmurhash' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-Isklearn/utils/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/murmurhash.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/murmurhash.c:587:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-amd64-2.7/sklearn/utils/src
compile options: '-Isklearn/utils/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-g++: sklearn/utils/src/MurmurHash3.cpp
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/murmurhash.o build/temp.linux-amd64-2.7/sklearn/utils/src/MurmurHash3.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/murmurhash.so
building 'sklearn.utils.lgamma' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-Isklearn/utils/src -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/lgamma.c
x86_64-linux-gnu-gcc: sklearn/utils/src/gamma.c
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/lgamma.o build/temp.linux-amd64-2.7/sklearn/utils/src/gamma.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/lgamma.so
building 'sklearn.utils.graph_shortest_path' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/graph_shortest_path.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/graph_shortest_path.c:586:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/graph_shortest_path.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/graph_shortest_path.so
building 'sklearn.utils.fast_dict' extension
compiling C++ sources
C compiler: x86_64-linux-gnu-g++ -pthread -DNDEBUG -g -fwrapv -O2 -Wall -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-g++: sklearn/utils/fast_dict.cpp
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/fast_dict.cpp:610:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
sklearn/utils/fast_dict.cpp: In function 'PyObject* __pyx_pw_7sklearn_5utils_9fast_dict_1argmin(PyObject*, PyObject*)':
sklearn/utils/fast_dict.cpp:25797:34: warning: '__pyx_v_min_key' may be used uninitialized in this function [-Wmaybe-uninitialized]
return PyInt_FromLong((long) value);
~~~~~~~~~~~~~~^~~~~~~~~~~~~~
sklearn/utils/fast_dict.cpp:4495:46: note: '__pyx_v_min_key' was declared here
__pyx_t_7sklearn_5utils_9fast_dict_ITYPE_t __pyx_v_min_key;
^~~~~~~~~~~~~~~
x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/fast_dict.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/fast_dict.so
building 'sklearn.utils.seq_dataset' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/seq_dataset.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/seq_dataset.c:586:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/seq_dataset.o -Lbuild/temp.linux-amd64-2.7 -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/seq_dataset.so
building 'sklearn.utils.weight_vector' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-DHAVE_CBLAS -DATLAS_INFO="\"3.10.3\"" -Isklearn/src/cblas -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/weight_vector.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/weight_vector.c:610:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/weight_vector.o -L/usr/lib/x86_64-linux-gnu -Lbuild/temp.linux-amd64-2.7 -lf77blas -lcblas -latlas -lf77blas -lcblas -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/weight_vector.so
building 'sklearn.utils._random' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/_random.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/_random.c:589:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/_random.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/_random.so
building 'sklearn.utils._logistic_sigmoid' extension
compiling C sources
C compiler: x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
compile options: '-I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c'
x86_64-linux-gnu-gcc: sklearn/utils/_logistic_sigmoid.c
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1816,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:18,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from sklearn/utils/_logistic_sigmoid.c:590:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by " \
^~~~~~~
x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-A8UpPM/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-amd64-2.7/sklearn/utils/_logistic_sigmoid.o -Lbuild/temp.linux-amd64-2.7 -lm -o /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/utils/_logistic_sigmoid.so
debian/rules override_dh_auto_test-arch
make[2]: Entering directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions
pyversions: missing debian/pyversions file, fall back to supported versions
py3versions: no X-Python3-Version in control file, using supported versions
for ver in 2.7; do \
i=`/bin/ls -d .pybuild/*python*_$ver/build/sklearn`; \
PYTHONPATH=$(dirname $i) python$ver -c 'import sklearn; sklearn.show_versions()'; \
for dir in data descr images; do \
rm -rf $i/datasets/$dir || true; \
ln -s ../../../../../sklearn/datasets/$dir $i/datasets; \
done; \
rm -rf $i/datasets/tests/data || true; \
ln -s ../../../../../../sklearn/datasets/tests/data $i/datasets/tests; \
done
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "sklearn/__init__.py", line 63, in <module>
from . import __check_build
File "sklearn/__check_build/__init__.py", line 46, in <module>
raise_build_error(e)
File "sklearn/__check_build/__init__.py", line 41, in raise_build_error
%s""" % (e, local_dir, ''.join(dir_content).strip(), msg))
ImportError: No module named _check_build
___________________________________________________________________________
Contents of sklearn/__check_build:
_check_build.c __pycache__ __init__.py
_check_build.pyx setup.py setup.pyc
__init__.pyc
___________________________________________________________________________
It seems that scikit-learn has not been built correctly.
If you have installed scikit-learn from source, please do not forget
to build the package before using it: run `python setup.py install` or
`make` in the source directory.
It appears that you are importing a local scikit-learn source tree. For
this, you need to have an inplace install. Maybe you are in the source
directory and you need to try from another location.
dh_auto_test
I: pybuild base:217: cd /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build; python2.7 -m pytest -m "not network" -k " not test_show_versions_with_blas"
============================= test session starts ==============================
platform linux2 -- Python 2.7.15+, pytest-3.6.4, py-1.7.0, pluggy-0.8.0
rootdir: /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg, inifile: setup.cfg
collected 10023 items / 2 deselected
sklearn/cluster/tests/test_affinity_propagation.py ....... [ 0%]
sklearn/cluster/tests/test_bicluster.py ........s. [ 0%]
sklearn/cluster/tests/test_birch.py ....... [ 0%]
sklearn/cluster/tests/test_dbscan.py .................. [ 0%]
sklearn/cluster/tests/test_feature_agglomeration.py . [ 0%]
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sklearn/decomposition/tests/test_dict_learning.py ...................... [ 4%]
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sklearn/decomposition/tests/test_factor_analysis.py . [ 4%]
sklearn/decomposition/tests/test_fastica.py ........ [ 4%]
sklearn/decomposition/tests/test_incremental_pca.py ................ [ 4%]
sklearn/decomposition/tests/test_kernel_pca.py ............ [ 5%]
sklearn/decomposition/tests/test_nmf.py ........................ [ 5%]
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sklearn/decomposition/tests/test_sparse_pca.py ..............ss.... [ 6%]
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sklearn/ensemble/tests/test_bagging.py .............................. [ 6%]
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sklearn/ensemble/tests/test_weight_boosting.py ................ [ 10%]
sklearn/feature_extraction/tests/test_dict_vectorizer.py ............... [ 10%]
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sklearn/feature_extraction/tests/test_feature_hasher.py ........... [ 10%]
sklearn/feature_extraction/tests/test_image.py .................... [ 10%]
sklearn/feature_extraction/tests/test_text.py .......................... [ 10%]
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sklearn/feature_selection/tests/test_mutual_info.py ........ [ 12%]
sklearn/feature_selection/tests/test_rfe.py ............ [ 12%]
sklearn/feature_selection/tests/test_variance_threshold.py .. [ 12%]
sklearn/gaussian_process/tests/test_gpc.py ............................. [ 12%]
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sklearn/gaussian_process/tests/test_gpr.py ............................. [ 12%]
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sklearn/gaussian_process/tests/test_kernels.py ......................... [ 13%]
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sklearn/linear_model/tests/test_base.py .................. [ 15%]
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sklearn/linear_model/tests/test_omp.py .................. [ 18%]
sklearn/linear_model/tests/test_passive_aggressive.py ................ [ 18%]
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sklearn/linear_model/tests/test_randomized_l1.py ....... [ 18%]
sklearn/linear_model/tests/test_ransac.py ....................... [ 18%]
sklearn/linear_model/tests/test_ridge.py ............................... [ 18%]
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sklearn/linear_model/tests/test_sparse_coordinate_descent.py ........... [ 21%]
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sklearn/linear_model/tests/test_theil_sen.py ................. [ 21%]
sklearn/manifold/tests/test_isomap.py ...... [ 21%]
sklearn/manifold/tests/test_locally_linear.py ....... [ 21%]
sklearn/manifold/tests/test_mds.py ... [ 21%]
sklearn/manifold/tests/test_spectral_embedding.py ....s....... [ 21%]
sklearn/manifold/tests/test_t_sne.py ................................... [ 22%]
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sklearn/metrics/cluster/tests/test_bicluster.py ... [ 22%]
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sklearn/metrics/cluster/tests/test_supervised.py ................... [ 22%]
sklearn/metrics/cluster/tests/test_unsupervised.py ........ [ 23%]
sklearn/metrics/tests/test_classification.py ........................... [ 23%]
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sklearn/mixture/tests/test_bayesian_mixture.py ............... [ 30%]
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=========================== short test summary info ============================
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: transform of SparsePCA is not invariant when applied to a subset.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Download RCV1 dataset to run this test.
SKIP [4] /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/preprocessing/tests/test_data.py:719: 'with_mean=True' cannot be used with sparse matrix.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Not testing NuSVC class weight as it is ignored.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: test_bayesian_on_diabetes is broken
SKIP [1] /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/tests/test_site_joblib.py:18: joblib is physically unvendored (e.g. as in debian)
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: score_samples of BernoulliRBM is not invariant when applied to a subset.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: This test is failing on the buildbot, but cannot reproduce. Temporarily disabling it until it can be reproduced and fixed.
SKIP [1] .pybuild/cpython2_2.7/build/sklearn/covariance/tests/test_graphical_lasso.py:142: On Python 2 DeprecationWarning is not issued for some unkown reason.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Covertype dataset can not be loaded.
SKIP [1] .pybuild/cpython2_2.7/build/sklearn/linear_model/tests/test_logistic.py:150: joblib is in serial mode
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: transform of MiniBatchSparsePCA is not invariant when applied to a subset.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: California housing dataset can not be loaded.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: decision_function of SVC is not invariant when applied to a subset.
SKIP [3] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Download 20 newsgroups to run this test
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: pyamg not available.
SKIP [1] .pybuild/cpython2_2.7/build/sklearn/ensemble/tests/test_forest.py:1286: joblib is in serial mode
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: numpydoc is required to test the docstrings, as well as python version >= 3.5
SKIP [3] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Skipping check_estimators_data_not_an_array for cross decomposition module as estimators are not deterministic.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: This test will run only on python3.5 and above
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: Possible multi-process bug with some BLAS under Python < 3.4
SKIP [2] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: skipping mini_batch_fit_transform.
SKIP [1] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: numpydoc is required to test the docstrings
SKIP [2] /usr/lib/python2.7/dist-packages/_pytest/nose.py:23: kddcup99 dataset can not be loaded.
SKIP [2] /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/cpython2_2.7/build/sklearn/preprocessing/tests/test_data.py:926: RobustScaler cannot center sparse matrix
9985 passed, 35 skipped, 2 deselected, 1 xfailed, 162 warnings in 337.08 seconds
make[2]: Leaving directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
touch debian/build-stamp-python2.7
PYBUILD_INTERPRETERS=python{version} PYBUILD_VERSIONS=3.7 dh build-arch --with python3 --buildsystem pybuild
touch debian/build-stamp-python3.7
PYBUILD_INTERPRETERS=python{version} PYBUILD_VERSIONS=3.6 dh build-arch --with python3 --buildsystem pybuild
touch debian/build-stamp-python3.6
:
# urllib.error.URLError -- have to ignore
# hotfix SPHINXOPTS -- remove in next release
\
PYTHONPATH=`/bin/ls -d /<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/*python*_3.6/build`:$(python3 -c 'import sys;print(":".join(sys.path))') \
SPHINXBUILD="python3.6 -m sphinx -j 1 -D mathjax_path=MathJax.js" \
SPHINXOPTS="-j 1 -D mathjax_path=MathJax.js" \
/usr/bin/make -C doc html
/bin/ls: cannot access '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/.pybuild/*python*_3.6/build': No such file or directory
make[2]: Entering directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/doc'
# These two lines make the build a bit more lengthy, and the
# the embedding of images more robust
rm -rf _build/html/_images
#rm -rf _build/doctrees/
python3.6 -m sphinx -j 1 -D mathjax_path=MathJax.js -b html -d _build/doctrees . _build/html/stable
Running Sphinx v1.7.9
Configuration error:
There is a programable error in your configuration file:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/sphinx/config.py", line 161, in __init__
execfile_(filename, config)
File "/usr/lib/python3/dist-packages/sphinx/util/pycompat.py", line 150, in execfile_
exec_(code, _globals)
File "conf.py", line 18, in <module>
from sklearn.externals.six import u
ModuleNotFoundError: No module named 'sklearn'
make[2]: *** [Makefile:47: html] Error 2
make[2]: Leaving directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg/doc'
make[1]: [debian/rules:113: doc/_build/html] Error 2 (ignored)
[ -d doc/_build/html ]
make[1]: *** [debian/rules:114: doc/_build/html] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/scikit-learn-0.20.0+dfsg'
make: *** [debian/rules:75: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2018-11-10T09:24:36Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Not cleaning session: cloned chroot in use
Keeping session: sid-amd64-sbuild-6e799c81-4f24-460b-ab64-252c2eb39d31
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: amd64
Build Type: full
Build-Space: 170876
Build-Time: 378
Distribution: unstable
Fail-Stage: build
Host Architecture: amd64
Install-Time: 83
Job: /tmp/pkgs/scikit-learn_0.20.0+dfsg-2.dsc
Machine Architecture: amd64
Package: scikit-learn
Package-Time: 470
Source-Version: 0.20.0+dfsg-2
Space: 170876
Status: attempted
Version: 0.20.0+dfsg-2
--------------------------------------------------------------------------------
Finished at 2018-11-10T09:24:36Z
Build needed 00:07:50, 170876k disk space
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