Bug#938925: xmds2: fails mpi hdf5 tests

Drew Parsons dparsons at debian.org
Fri Aug 30 10:02:52 BST 2019


Source: xmds2
Version: 3.0.0+dfsg-2
Severity: serious

xmds2's mpi/hdf5 tests (test_mpi_xsilloading_hdf5 etc) have recently started
failing.

h5py was recently (2.9.0-4) updated to build with mpi support, that is
built against libhdf5-mpi-dev (aided by mpi4py) rather than libhdf5-dev.

I don't know if it means xmds2 just needs to be rebuilt against the
new h5py/mpi4py packages or if the problem is more complex than that.

The xmds2 autopkgtest failure is holding back h5py with mpi support
from migrating to testing.



-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled



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