Bug#921636: python-fluids: FTBFS against scipy 1.2.0
Drew Parsons
dparsons at debian.org
Thu Feb 7 14:28:15 GMT 2019
Package: python-fluids
Version: 0.1.72-2
Severity: normal
Control: affects -1 python3-scipy
python-fluids fails to build from source against scipy 1.2.0
(available in experimental).
Errors are in test_PSDLognormal_ds_discrete and test_PSDLognormal_dn
Build log attached.
-- System Information:
Debian Release: buster/sid
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 4.19.0-2-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_WARN, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages python-fluids depends on:
ii python 2.7.15-4
ii python-fuzzywuzzy 0.17.0-1
ii python-ipython 5.8.0-1
ii python-matplotlib 2.2.3-5
ii python-pandas 0.23.3-1
ii python-pint 0.9-1
ii python-scipy 1.2.0-1
ii python-sympy 1.3-2
python-fluids recommends no packages.
Versions of packages python-fluids suggests:
ii python-fluids-doc 0.1.72-2
-- no debconf information
-------------- next part --------------
dpkg-buildpackage: info: source package python-fluids
dpkg-buildpackage: info: source version 0.1.72-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Kurt Kremitzki <kurt at kwk.systems>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
fakeroot debian/rules clean
dh clean --with python2,python3,sphinxdoc --buildsystem=pybuild --test-pytest
dh_auto_clean -O--buildsystem=pybuild -O--test-pytest
I: pybuild base:217: python2.7 setup.py clean
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
running clean
removing '/home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build' (and everything under it)
'build/bdist.linux-arm64' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
I: pybuild base:217: python3.7 setup.py clean
running clean
removing '/home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build' (and everything under it)
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
'build/bdist.linux-arm64' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
dh_autoreconf_clean -O--buildsystem=pybuild -O--test-pytest
dh_clean -O--buildsystem=pybuild -O--test-pytest
dpkg-source -b .
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building python-fluids using existing ./python-fluids_0.1.72.orig.tar.gz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: building python-fluids in python-fluids_0.1.72-2.debian.tar.xz
dpkg-source: info: building python-fluids in python-fluids_0.1.72-2.dsc
debian/rules build
dh build --with python2,python3,sphinxdoc --buildsystem=pybuild --test-pytest
dh_update_autotools_config -O--buildsystem=pybuild -O--test-pytest
dh_autoreconf -O--buildsystem=pybuild -O--test-pytest
dh_auto_configure -O--buildsystem=pybuild -O--test-pytest
I: pybuild base:217: python2.7 setup.py config
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
running config
I: pybuild base:217: python3.7 setup.py config
running config
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
debian/rules override_dh_auto_build
make[1]: Entering directory '/home/dparsons/scipy/python-fluids-0.1.72'
dh_auto_build
I: pybuild base:217: /usr/bin/python setup.py build
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
running build
running build_py
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/drag.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/open_flow.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/saltation.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/filters.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/vectorized.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/piping.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/packed_tower.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/units.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/packed_bed.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/design_climate.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/atmosphere.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/safety_valve.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/compressible.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/separator.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/friction.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/two_phase_voidage.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/particle_size_distribution.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/two_phase.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/control_valve.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/core.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/mixing.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/pump.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/fittings.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/geometry.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
copying fluids/flow_meter.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
copying fluids/data/ASTM E11 sieves.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
copying fluids/data/isd-history-cleaned.tsv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
copying fluids/data/residential power.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
copying fluids/data/ISO 3310-1 sieves.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
copying fluids/data/3 phase power.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/data
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/README -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00_header.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/LICENSE -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00_data.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/nrlmsise00
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/gd2qd.dat -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/hwm93.for -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/hwm14.pyf -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/dwm07b104i.dat -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/hwm14.f90 -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/hwm123114.bin -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/pychebfun.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
copying fluids/optional/hwm93.pyf -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/optional
I: pybuild base:217: /usr/bin/python3 setup.py build
running build
running build_py
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/drag.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/open_flow.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/saltation.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/filters.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/vectorized.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/piping.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/packed_tower.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/units.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/packed_bed.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/design_climate.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/atmosphere.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/safety_valve.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/compressible.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/separator.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/friction.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/two_phase_voidage.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/particle_size_distribution.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/two_phase.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/control_valve.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/core.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/mixing.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/pump.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/fittings.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/geometry.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
copying fluids/flow_meter.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
copying fluids/data/ASTM E11 sieves.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
copying fluids/data/isd-history-cleaned.tsv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
copying fluids/data/residential power.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
copying fluids/data/ISO 3310-1 sieves.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
copying fluids/data/3 phase power.csv -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/data
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/README -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00_header.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/LICENSE -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00_data.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
copying fluids/nrlmsise00/nrlmsise_00.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/nrlmsise00
creating /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/gd2qd.dat -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/hwm93.for -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/hwm14.pyf -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/dwm07b104i.dat -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/hwm14.f90 -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/hwm123114.bin -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/pychebfun.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/__init__.py -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
copying fluids/optional/hwm93.pyf -> /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython3_3.7_fluids/build/fluids/optional
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires'
warnings.warn(msg)
/usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'extras_require'
warnings.warn(msg)
PYTHONPATH=. python3 -m sphinx -N -bhtml docs/ build/html # HTML generator
Running Sphinx v1.8.3
making output directory...
[autosummary] generating autosummary for: Examples/Crane TP 410 Solved Problems/7.1 Smooth Pipe (Plastic).ipynb, Examples/Crane TP 410 Solved Problems/7.10 Piping Systems - Steam.ipynb, Examples/Crane TP 410 Solved Problems/7.11 Flat heating Coils - Water.ipynb, Examples/Crane TP 410 Solved Problems/7.13 Flow given in English Units - Oil.ipynb, Examples/Crane TP 410 Solved Problems/7.14 Bernoulli's Theorem-Water.ipynb, Examples/Crane TP 410 Solved Problems/7.2 L, L over D and K from Kv for Conventional Type Valves.ipynb, Examples/Crane TP 410 Solved Problems/7.29 Orifice Flow Rate Calculation.ipynb, Examples/Crane TP 410 Solved Problems/7.3 L, L over D, K, and Kv for Conventional Type Valves.ipynb, Examples/Crane TP 410 Solved Problems/7.4 Venturi Type Valves.ipynb, Examples/Crane TP 410 Solved Problems/7.5 Lift Check Valves.ipynb, ..., fluids.safety_valve.rst, fluids.saltation.rst, fluids.separator.rst, fluids.two_phase.rst, fluids.two_phase_voidage.rst, fluids.units.rst, fluids.vectorized.rst, index.rst, modules.rst, tutorial.rst
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 42 source files that are out of date
updating environment: 42 added, 0 changed, 0 removed
reading sources... [ 2%] Examples/Crane TP 410 Solved Problems/7.1 Smooth Pipe (Plastic)
reading sources... [ 4%] Examples/Crane TP 410 Solved Problems/7.10 Piping Systems - Steam
reading sources... [ 7%] Examples/Crane TP 410 Solved Problems/7.11 Flat heating Coils - Water
reading sources... [ 9%] Examples/Crane TP 410 Solved Problems/7.13 Flow given in English Units - Oil
reading sources... [ 11%] Examples/Crane TP 410 Solved Problems/7.14 Bernoulli's Theorem-Water
reading sources... [ 14%] Examples/Crane TP 410 Solved Problems/7.2 L, L over D and K from Kv for Conventional Type Valves
reading sources... [ 16%] Examples/Crane TP 410 Solved Problems/7.29 Orifice Flow Rate Calculation
reading sources... [ 19%] Examples/Crane TP 410 Solved Problems/7.3 L, L over D, K, and Kv for Conventional Type Valves
reading sources... [ 21%] Examples/Crane TP 410 Solved Problems/7.4 Venturi Type Valves
reading sources... [ 23%] Examples/Crane TP 410 Solved Problems/7.5 Lift Check Valves
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
Your version must be at least (1.12.1) but less than (2.0.0).
Refer to http://pandoc.org/installing.html.
Continuing with doubts...
nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
Your version must be at least (1.12.1) but less than (2.0.0).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
Your version must be at least (1.12.1) but less than (2.0.0).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
Your version must be at least (1.12.1) but less than (2.0.0).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
Your version must be at least (1.12.1) but less than (2.0.0).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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Continuing with doubts...
nbconvert.utils.pandoc.check_pandoc_version()
reading sources... [ 26%] Examples/Crane TP 410 Solved Problems/7.6 Reduced Port Ball Valve
reading sources... [ 28%] Examples/Crane TP 410 Solved Problems/7.7 Laminar flow in Valves, Fittings, and Pipe - System from Example 7.6
reading sources... [ 30%] Examples/Crane TP 410 Solved Problems/7.8 Laminar flow in Valves, Fittings, and Pipe - SAE oil through a pipe and globe valve
reading sources... [ 33%] examples
reading sources... [ 35%] fluids
reading sources... [ 38%] fluids.atmosphere
reading sources... [ 40%] fluids.compressible
reading sources... [ 42%] fluids.control_valve
reading sources... [ 45%] fluids.core
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reading sources... [ 50%] fluids.filters
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reading sources... [ 57%] fluids.friction
reading sources... [ 59%] fluids.geometry
reading sources... [ 61%] fluids.mixing
reading sources... [ 64%] fluids.open_flow
reading sources... [ 66%] fluids.packed_bed
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reading sources... [ 71%] fluids.particle_size_distribution
reading sources... [ 73%] fluids.piping
reading sources... [ 76%] fluids.pump
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reading sources... [ 80%] fluids.saltation
reading sources... [ 83%] fluids.separator
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reading sources... [ 90%] fluids.units
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reading sources... [ 95%] index
reading sources... [ 97%] modules
reading sources... [100%] tutorial
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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Continuing with doubts...
nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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nbconvert.utils.pandoc.check_pandoc_version()
/usr/lib/python3/dist-packages/nbsphinx.py:1174: RuntimeWarning: You are using an unsupported version of pandoc (2.2.1).
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Continuing with doubts...
nbconvert.utils.pandoc.check_pandoc_version()
/home/dparsons/scipy/python-fluids-0.1.72/fluids/compressible.py:docstring of fluids.compressible.isentropic_T_rise_compression:51: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/home/dparsons/scipy/python-fluids-0.1.72/fluids/core.py:docstring of fluids.core.Stanton:48: WARNING: Duplicate explicit target name: "r114".
/home/dparsons/scipy/python-fluids-0.1.72/fluids/core.py:docstring of fluids.core.Stanton:48: WARNING: duplicate citation R114, other instance in /home/dparsons/scipy/python-fluids-0.1.72/docs/fluids.core.rst
/home/dparsons/scipy/python-fluids-0.1.72/fluids/packed_bed.py:docstring of fluids.packed_bed.Brauer:67: WARNING: Duplicate explicit target name: "r495".
/home/dparsons/scipy/python-fluids-0.1.72/fluids/packed_bed.py:docstring of fluids.packed_bed.Harrison_Brunner_Hecker:68: WARNING: Unexpected indentation.
/home/dparsons/scipy/python-fluids-0.1.72/fluids/packed_bed.py:docstring of fluids.packed_bed.Brauer:67: WARNING: duplicate citation R495, other instance in /home/dparsons/scipy/python-fluids-0.1.72/docs/fluids.packed_bed.rst
/home/dparsons/scipy/python-fluids-0.1.72/fluids/particle_size_distribution.py:docstring of fluids.particle_size_distribution.ParticleSizeDistribution.vssa:7: WARNING: Explicit markup ends without a blank line; unexpected unindent.
/home/dparsons/scipy/python-fluids-0.1.72/fluids/particle_size_distribution.py:docstring of fluids.particle_size_distribution.ParticleSizeDistribution.vssa:8: WARNING: Unexpected section title.
Returns
-------
/home/dparsons/scipy/python-fluids-0.1.72/fluids/two_phase_voidage.py:docstring of fluids.two_phase_voidage.Lin_Kwok:2: WARNING: Unknown target name: "3".
/home/dparsons/scipy/python-fluids-0.1.72/docs/tutorial.rst:561: WARNING: Inline interpreted text or phrase reference start-string without end-string.
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 2%] Examples/Crane TP 410 Solved Problems/7.1 Smooth Pipe (Plastic)
writing output... [ 4%] Examples/Crane TP 410 Solved Problems/7.10 Piping Systems - Steam
writing output... [ 7%] Examples/Crane TP 410 Solved Problems/7.11 Flat heating Coils - Water
writing output... [ 9%] Examples/Crane TP 410 Solved Problems/7.13 Flow given in English Units - Oil
writing output... [ 11%] Examples/Crane TP 410 Solved Problems/7.14 Bernoulli's Theorem-Water
writing output... [ 14%] Examples/Crane TP 410 Solved Problems/7.2 L, L over D and K from Kv for Conventional Type Valves
writing output... [ 16%] Examples/Crane TP 410 Solved Problems/7.29 Orifice Flow Rate Calculation
writing output... [ 19%] Examples/Crane TP 410 Solved Problems/7.3 L, L over D, K, and Kv for Conventional Type Valves
writing output... [ 21%] Examples/Crane TP 410 Solved Problems/7.4 Venturi Type Valves
writing output... [ 23%] Examples/Crane TP 410 Solved Problems/7.5 Lift Check Valves
writing output... [ 26%] Examples/Crane TP 410 Solved Problems/7.6 Reduced Port Ball Valve
writing output... [ 28%] Examples/Crane TP 410 Solved Problems/7.7 Laminar flow in Valves, Fittings, and Pipe - System from Example 7.6
writing output... [ 30%] Examples/Crane TP 410 Solved Problems/7.8 Laminar flow in Valves, Fittings, and Pipe - SAE oil through a pipe and globe valve
writing output... [ 33%] examples
writing output... [ 35%] fluids
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writing output... [ 42%] fluids.control_valve
writing output... [ 45%] fluids.core
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writing output... [ 83%] fluids.separator
writing output... [ 85%] fluids.two_phase
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writing output... [ 92%] fluids.vectorized
writing output... [ 95%] index
writing output... [ 97%] modules
writing output... [100%] tutorial
/home/dparsons/scipy/python-fluids-0.1.72/fluids/packed_bed.py:docstring of fluids.packed_bed.Brauer:2: WARNING: citation not found: R496
/home/dparsons/scipy/python-fluids-0.1.72/fluids/packed_bed.py:docstring of fluids.packed_bed.Brauer:56: WARNING: citation not found: R496
/home/dparsons/scipy/python-fluids-0.1.72/docs/tutorial.rst:357: WARNING: undefined label: <tank> (if the link has no caption the label must precede a section header)
generating indices... genindex py-modindex
highlighting module code... [ 4%] fluids.atmosphere
highlighting module code... [ 9%] fluids.compressible
highlighting module code... [ 13%] fluids.control_valve
highlighting module code... [ 18%] fluids.core
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highlighting module code... [ 50%] fluids.mixing
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highlighting module code... [ 63%] fluids.packed_tower
highlighting module code... [ 68%] fluids.particle_size_distribution
highlighting module code... [ 72%] fluids.piping
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highlighting module code... [ 81%] fluids.safety_valve
highlighting module code... [ 86%] fluids.saltation
highlighting module code... [ 90%] fluids.separator
highlighting module code... [ 95%] fluids.two_phase
highlighting module code... [100%] fluids.two_phase_voidage
writing additional pages... search
copying images... [ 6%] fittings/contraction_sharp.png
copying images... [ 13%] fittings/contraction_round.png
copying images... [ 20%] fittings/contraction_conical.png
copying images... [ 26%] fittings/contraction_beveled.png
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copying images... [ 60%] fittings/entrance_mounted_at_an_angle.png
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copying images... [ 93%] fittings/bend_rounded.png
copying images... [100%] fittings/bend_mitre.png
copying static files... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 13 warnings.
The HTML pages are in build/html.
make[1]: Leaving directory '/home/dparsons/scipy/python-fluids-0.1.72'
dh_auto_test -O--buildsystem=pybuild -O--test-pytest
I: pybuild base:217: cd /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build; python2.7 -m pytest tests
============================= test session starts ==============================
platform linux2 -- Python 2.7.15+, pytest-3.10.1, py-1.7.0, pluggy-0.8.0
rootdir: /home/dparsons/scipy/python-fluids-0.1.72, inifile: pytest.ini
plugins: cov-2.6.0
collected 271 items
tests/test_atmosphere.py ... [ 1%]
tests/test_compressible.py ................. [ 7%]
tests/test_control_valve.py ... [ 8%]
tests/test_core.py ... [ 9%]
tests/test_design_climate.py ..s...s [ 12%]
tests/test_drag.py ..... [ 14%]
tests/test_filters.py . [ 14%]
tests/test_fittings.py .................... [ 21%]
tests/test_flow_meter.py ................................... [ 34%]
tests/test_friction.py ........................... [ 44%]
tests/test_geometry.py ........... [ 48%]
tests/test_mixing.py . [ 49%]
tests/test_open_flow.py . [ 49%]
tests/test_packed_bed.py .. [ 50%]
tests/test_packed_tower.py .... [ 51%]
tests/test_particle_size_distribution.py ...................FF.......... [ 63%]
[ 63%]
tests/test_piping.py .. [ 63%]
tests/test_pump.py ........... [ 67%]
tests/test_safety_valve.py . [ 68%]
tests/test_saltation.py ....... [ 70%]
tests/test_separator.py .... [ 72%]
tests/test_two_phase.py ......................... [ 81%]
tests/test_two_phase_voidage.py ...................................... [ 95%]
tests/test_units.py ........ [ 98%]
tests/test_vectorized.py . [ 98%]
tests/nrlmsise00/nrlmsise_00_test.py . [ 99%]
tests/nrlmsise00/test_nrlmsise00_file_output.py . [ 99%]
tests/nrlmsise00/test_nrlmsise00_full.py . [100%]
=================================== FAILURES ===================================
________________________ test_PSDLognormal_ds_discrete _________________________
def test_PSDLognormal_ds_discrete():
# Test the cdf discrete
dist = PSDLognormal(s=0.5, d_characteristic=5E-6)
ds = dist.ds_discrete(d_min=1e-7, d_max=1e-6, pts=8)
ans = dist.fractions_discrete(ds)
fractions_expect = [2.55351295663786e-15, 3.831379657981415e-13, 3.762157252396037e-11, 2.41392961175535e-09, 1.01281244724305e-07, 2.7813750147487326e-06, 5.004382447515443e-05, 0.00059054208024234]
> assert_allclose(fractions_expect, ans, rtol=1e-5)
E AssertionError:
E Not equal to tolerance rtol=1e-05, atol=0
E
E Mismatch: 12.5%
E Max absolute difference: 5.55111512e-17
E Max relative difference: 0.00014491
E x: array([2.553513e-15, 3.831380e-13, 3.762157e-11, 2.413930e-09,
E 1.012812e-07, 2.781375e-06, 5.004382e-05, 5.905421e-04])
E y: array([2.553513e-15, 3.830825e-13, 3.762163e-11, 2.413930e-09,
E 1.012812e-07, 2.781375e-06, 5.004382e-05, 5.905421e-04])
tests/test_particle_size_distribution.py:430: AssertionError
_____________________________ test_PSDLognormal_dn _____________________________
def test_PSDLognormal_dn():
disc = PSDLognormal(s=0.5, d_characteristic=5E-6)
# Test input of 1
ans = disc.dn(1)
# The answer can vary quite a lot near the end, so it is safest just to
# compare with the reverse, plugging it back to cdf
assert_allclose(disc.cdf(ans), 1, rtol=1E-12)
# assert_allclose(ans, 0.0002964902595794474)
# Test zero input
assert_allclose(disc.dn(0), 0)
# Test 50% input
ans = disc.dn(.5)
assert_allclose(ans, 5.0e-06, rtol=1E-6)
with pytest.raises(Exception):
disc.dn(1.5)
with pytest.raises(Exception):
disc.dn(-.5)
# Other orders of n - there is no comparison data for this yet!!
assert_allclose(disc.pdf(1E-5), disc.pdf(1E-5, 3))
assert_allclose(disc.pdf(1E-5, 2), 13468.122877854335)
assert_allclose(disc.pdf(1E-5, 1), 4628.2482296943508)
assert_allclose(disc.pdf(1E-5, 0), 1238.6613794833427)
# Some really large s tests - found some issues with this
dist = PSDLognormal(s=4, d_characteristic=5E-6)
> assert_allclose(dist.dn(1e-15), 8.220922763476676e-20, rtol=1e-3)
E AssertionError:
E Not equal to tolerance rtol=0.001, atol=0
E
E Mismatch: 100%
E Max absolute difference: 1.08103573e-21
E Max relative difference: 0.01314981
E x: array(8.112819e-20)
E y: array(8.220923e-20)
tests/test_particle_size_distribution.py:463: AssertionError
=============================== warnings summary ===============================
.pybuild/cpython2_2.7_fluids/build/tests/test_particle_size_distribution.py::test_PSDLognormal_mean_sizes_numerical
/usr/lib/python2.7/dist-packages/numpy/core/function_base.py:277: DeprecationWarning: object of type <type 'float'> cannot be safely interpreted as an integer.
y = linspace(start, stop, num=num, endpoint=endpoint, axis=axis)
.pybuild/cpython2_2.7_fluids/build/tests/test_particle_size_distribution.py::test_PSDCustom_mean_sizes_numerical
/home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build/fluids/particle_size_distribution.py:2035: IntegrationWarning: The maximum number of subdivisions (50) has been achieved.
If increasing the limit yields no improvement it is advised to analyze
the integrand in order to determine the difficulties. If the position of a
local difficulty can be determined (singularity, discontinuity) one will
probably gain from splitting up the interval and calling the integrator
on the subranges. Perhaps a special-purpose integrator should be used.
return float(quad(to_int, d_min, d_max, points=points)[0]) #
-- Docs: https://docs.pytest.org/en/latest/warnings.html
========= 2 failed, 267 passed, 2 skipped, 2 warnings in 46.23 seconds =========
E: pybuild pybuild:338: test: plugin distutils failed with: exit code=1: cd /home/dparsons/scipy/python-fluids-0.1.72/.pybuild/cpython2_2.7_fluids/build; python2.7 -m pytest tests
dh_auto_test: pybuild --test --test-pytest -i python{version} -p 2.7 returned exit code 13
make: *** [debian/rules:10: build] Error 25
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
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