Bug#941846: python-h5py: fix upstream MPI tests

Drew Parsons dparsons at debian.org
Sun Oct 6 13:13:43 BST 2019


Package: python-h5py
Version: 2.10.0-1
Severity: normal
Control: forwarded -1 https://github.com/h5py/h5py/issues/1364

Upstream tests currently break when run with mpirun.

debian/tests/test_file_mpi.py has been created as a workaround to run
mpio tests manually.

Problem is logged upstream in Issue#1364.

Upstream is working on it, see PR#1255,
https://github.com/h5py/h5py/pull/1255



-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 5.2.0-2-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages python-h5py depends on:
ii  libc6                             2.29-2
ii  libhdf5-openmpi-103               1.10.4+repack-10
ii  python                            2.7.16-1
ii  python-mpi4py                     3.0.2-13
ii  python-numpy [python-numpy-abi9]  1:1.16.5-1
ii  python-six                        1.12.0-2

python-h5py recommends no packages.

Versions of packages python-h5py suggests:
ii  python-h5py-doc  2.10.0-1

-- no debconf information



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