Bug#966891: dolfinx: FTBFS: utils.cpp:693:48: error: ‘const ufc_coordinate_mapping’ {aka ‘const struct ufc_coordinate_mapping’} has no member named ‘compute_physical_coordinates’

[Lucas Nussbaum]

Source: dolfinx
Version: 2019.2.0~git20200420.6043d6d-6
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20200802 ftbfs-bullseye

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.

Relevant part (hopefully):
> cd "/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu-real/dolfinx" && /usr/bin/c++  -DDOLFINX_VERSION=\"2019.2.9.99\" -DEIGEN_MAX_ALIGN_BYTES=32 -DHAS_SLEPC -Ddolfinx_EXPORTS -I"/<<PKGBUILDDIR>>/cpp" -I"/<<PKGBUILDDIR>>/cpp/dolfinx" -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/include/eigen3 -isystem /usr/include/hdf5/openmpi -isystem /usr/include/scotch -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/petscdir/petsc3.13/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.13/x86_64-linux-gnu-real/include  -fpermissive -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -g -DNDEBUG -fPIC   -pthread -std=c++17 -o CMakeFiles/dolfinx.dir/fem/FormCoefficients.cpp.o -c "/<<PKGBUILDDIR>>/cpp/dolfinx/fem/FormCoefficients.cpp"
> /<<PKGBUILDDIR>>/cpp/dolfinx/fem/utils.cpp: In function ‘dolfinx::fem::CoordinateElement dolfinx::fem::create_coordinate_map(const ufc_coordinate_mapping&)’:
> /<<PKGBUILDDIR>>/cpp/dolfinx/fem/utils.cpp:693:48: error: ‘const ufc_coordinate_mapping’ {aka ‘const struct ufc_coordinate_mapping’} has no member named ‘compute_physical_coordinates’
>   693 |       ufc_cmap.signature, dof_layout, ufc_cmap.compute_physical_coordinates,
>       |                                                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
> /<<PKGBUILDDIR>>/cpp/dolfinx/fem/utils.cpp:694:16: error: ‘const ufc_coordinate_mapping’ {aka ‘const struct ufc_coordinate_mapping’} has no member named ‘compute_reference_geometry’
>   694 |       ufc_cmap.compute_reference_geometry);
>       |                ^~~~~~~~~~~~~~~~~~~~~~~~~~
> make[4]: *** [dolfinx/CMakeFiles/dolfinx.dir/build.make:378: dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o] Error 1

The full build log is available from:
   http://qa-logs.debian.net/2020/08/02/dolfinx_2019.2.0~git20200420.6043d6d-6_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.