Bug#974558: src:gfan: autopkgtest times out on i386 and armhf

[Paul Gevers]

Source: gfan
Version: 0.6.2-2
User: debian-ci at lists.debian.org
Usertags: timeout
X-Debbugs-CC: debian-ci at lists.debian.org

Dear maintainer,

Your package has an autopkgtest, great! However, it fails due to timeout
on i386 and armhf. Can you please investigate and fix the situation?

To avoid needlessly stress our infrastructure, I'll block this
package on i386 and armhf until this bug is fixed.

Paul

https://ci.debian.net/data/autopkgtest/testing/i386/g/gfan/8116190/log.gz

Running command:"cat <testsuite/0201Homogenize/input|gfan
_homogenize>testsuite/0201Homogenize/outputNew"
Running command:"cat <testsuite/0202InitialForms/input|gfan
_initialforms --ideal --pair | gfan _tropicaltraverse | grep F_VECTOR
-A1>testsuite/0202InitialForms/outputNew"
Running command:"cat <testsuite/0203KrullDimension/input|gfan
_krulldimension>testsuite/0203KrullDimension/outputNew"
Running command:"cat <testsuite/0500MixedVolume/input|gfan
_mixedvolume>testsuite/0500MixedVolume/outputNew"
Running command:"cat <testsuite/0501PAdicGroebnerBasis/input|gfan _padic
--groebnerBasis>testsuite/0501PAdicGroebnerBasis/outputNew"
Running command:"cat <testsuite/0502PAdicInitialIdeal/input|gfan _padic
--initialIdeal>testsuite/0502PAdicInitialIdeal/outputNew"
Running command:"cat <testsuite/0503PAdicGroebnerPolyhedron/input|gfan
_padic --groebnerPolyhedron | grep -A1
F_VECTOR>testsuite/0503PAdicGroebnerPolyhedron/outputNew"
Running command:"cat <testsuite/0504PAdicGroebnerComplex/input|gfan
_padic --groebnerComplex | grep -A1
F_VECTOR>testsuite/0504PAdicGroebnerComplex/outputNew"
Running command:"cat <testsuite/0506IntegerGroebnerBasis/input|gfan
_overintegers --groebnerBasis>testsuite/0506IntegerGroebnerBasis/outputNew"
Running command:"cat <testsuite/0507InitialIdeal/input|gfan
_overintegers --initialIdeal -m>testsuite/0507InitialIdeal/outputNew"
Running command:"cat <testsuite/0508IntegerGroebnerCone/input|gfan
_overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 |
sort>testsuite/0508IntegerGroebnerCone/outputNew"
Running command:"cat <testsuite/0509IntegerGroebnerFan/input|gfan
_overintegers --groebnerFan |grep
F_VECTOR>testsuite/0509IntegerGroebnerFan/outputNew"
Running command:"cat <testsuite/0510Minkowskisum/input|gfan
_minkowskisum --symmetry | grep -A1
F_VECTOR>testsuite/0510Minkowskisum/outputNew"
Running command:"cat <testsuite/0511FanHomology/input|gfan _fanhomology
-i
testsuite/0511FanHomology/nonTopHomology.poly>testsuite/0511FanHomology/outputNew"
Running command:"cat <testsuite/0600ResultantFan/input|gfan
_resultantfan --vectorinput | grep F_VECTOR
-A1>testsuite/0600ResultantFan/outputNew"
Running command:"cat <testsuite/0601ResultantFanSpecialised/input|gfan
_resultantfan --vectorinput --special| grep F_VECTOR
-A1>testsuite/0601ResultantFanSpecialised/outputNew"
Running command:"cat <testsuite/0602ResultantFanProjection/input|gfan
_resultantfan --vectorinput --projection| grep F_VECTOR
-A1>testsuite/0602ResultantFanProjection/outputNew"
autopkgtest [07:34:24]: ERROR: timed out on command "su -s /bin/bash
debci -c set -e; export USER=`id -nu`; . /etc/profile >/dev/null 2>&1 ||
true;  . ~/.profile >/dev/null 2>&1 || true;
buildtree="/tmp/autopkgtest-lxc.gow6dvg3/downtmp/build.1rF/src"; mkdir
-p -m 1777 --
"/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-artifacts"; export
AUTOPKGTEST_ARTIFACTS="/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-artifacts";
export ADT_ARTIFACTS="$AUTOPKGTEST_ARTIFACTS"; mkdir -p -m 755
"/tmp/autopkgtest-lxc.gow6dvg3/downtmp/autopkgtest_tmp"; export
AUTOPKGTEST_TMP="/tmp/autopkgtest-lxc.gow6dvg3/downtmp/autopkgtest_tmp";
export ADTTMP="$AUTOPKGTEST_TMP"; export DEBIAN_FRONTEND=noninteractive;
export LANG=C.UTF-8; export DEB_BUILD_OPTIONS=parallel=2; unset LANGUAGE
LC_CTYPE LC_NUMERIC LC_TIME LC_COLLATE   LC_MONETARY LC_MESSAGES
LC_PAPER LC_NAME LC_ADDRESS   LC_TELEPHONE LC_MEASUREMENT
LC_IDENTIFICATION LC_ALL;rm -f /tmp/autopkgtest_script_pid; set -C; echo
$$ > /tmp/autopkgtest_script_pid; set +C; trap "rm -f
/tmp/autopkgtest_script_pid" EXIT INT QUIT PIPE; cd "$buildtree"; touch
/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-stdout
/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-stderr; bash -ec 'gfan
_test --gfan gfan' 2> >(tee -a
/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-stderr >&2) > >(tee -a
/tmp/autopkgtest-lxc.gow6dvg3/downtmp/command1-stdout);" (kind: test)
autopkgtest [07:34:24]: test command1: -----------------------]




https://ci.debian.net/data/autopkgtest/testing/armhf/g/gfan/7971362/log.gz

Running command:"cat <testsuite/0201Homogenize/input|gfan
_homogenize>testsuite/0201Homogenize/outputNew"
Running command:"cat <testsuite/0202InitialForms/input|gfan
_initialforms --ideal --pair | gfan _tropicaltraverse | grep F_VECTOR
-A1>testsuite/0202InitialForms/outputNew"
Running command:"cat <testsuite/0203KrullDimension/input|gfan
_krulldimension>testsuite/0203KrullDimension/outputNew"
Running command:"cat <testsuite/0500MixedVolume/input|gfan
_mixedvolume>testsuite/0500MixedVolume/outputNew"
Running command:"cat <testsuite/0501PAdicGroebnerBasis/input|gfan _padic
--groebnerBasis>testsuite/0501PAdicGroebnerBasis/outputNew"
Running command:"cat <testsuite/0502PAdicInitialIdeal/input|gfan _padic
--initialIdeal>testsuite/0502PAdicInitialIdeal/outputNew"
Running command:"cat <testsuite/0503PAdicGroebnerPolyhedron/input|gfan
_padic --groebnerPolyhedron | grep -A1
F_VECTOR>testsuite/0503PAdicGroebnerPolyhedron/outputNew"
Running command:"cat <testsuite/0504PAdicGroebnerComplex/input|gfan
_padic --groebnerComplex | grep -A1
F_VECTOR>testsuite/0504PAdicGroebnerComplex/outputNew"
Running command:"cat <testsuite/0506IntegerGroebnerBasis/input|gfan
_overintegers --groebnerBasis>testsuite/0506IntegerGroebnerBasis/outputNew"
Running command:"cat <testsuite/0507InitialIdeal/input|gfan
_overintegers --initialIdeal -m>testsuite/0507InitialIdeal/outputNew"
Running command:"cat <testsuite/0508IntegerGroebnerCone/input|gfan
_overintegers --groebnerCone | grep N_RAYS -v | grep RAYS -A3 |
sort>testsuite/0508IntegerGroebnerCone/outputNew"
Running command:"cat <testsuite/0509IntegerGroebnerFan/input|gfan
_overintegers --groebnerFan |grep
F_VECTOR>testsuite/0509IntegerGroebnerFan/outputNew"
Running command:"cat <testsuite/0510Minkowskisum/input|gfan
_minkowskisum --symmetry | grep -A1
F_VECTOR>testsuite/0510Minkowskisum/outputNew"
Running command:"cat <testsuite/0511FanHomology/input|gfan _fanhomology
-i
testsuite/0511FanHomology/nonTopHomology.poly>testsuite/0511FanHomology/outputNew"
Running command:"cat <testsuite/0600ResultantFan/input|gfan
_resultantfan --vectorinput | grep F_VECTOR
-A1>testsuite/0600ResultantFan/outputNew"
Running command:"cat <testsuite/0601ResultantFanSpecialised/input|gfan
_resultantfan --vectorinput --special| grep F_VECTOR
-A1>testsuite/0601ResultantFanSpecialised/outputNew"
Running command:"cat <testsuite/0602ResultantFanProjection/input|gfan
_resultantfan --vectorinput --projection| grep F_VECTOR
-A1>testsuite/0602ResultantFanProjection/outputNew"
autopkgtest [22:12:48]: ERROR: timed out on command "su -s /bin/bash
debci -c set -e; export USER=`id -nu`; . /etc/profile >/dev/null 2>&1 ||
true;  . ~/.profile >/dev/null 2>&1 || true;
buildtree="/tmp/autopkgtest-lxc.tgntdk4i/downtmp/build.cXu/src"; mkdir
-p -m 1777 --
"/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-artifacts"; export
AUTOPKGTEST_ARTIFACTS="/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-artifacts";
export ADT_ARTIFACTS="$AUTOPKGTEST_ARTIFACTS"; mkdir -p -m 755
"/tmp/autopkgtest-lxc.tgntdk4i/downtmp/autopkgtest_tmp"; export
AUTOPKGTEST_TMP="/tmp/autopkgtest-lxc.tgntdk4i/downtmp/autopkgtest_tmp";
export ADTTMP="$AUTOPKGTEST_TMP"; export DEBIAN_FRONTEND=noninteractive;
export LANG=C.UTF-8; export DEB_BUILD_OPTIONS=parallel=32; unset
LANGUAGE LC_CTYPE LC_NUMERIC LC_TIME LC_COLLATE   LC_MONETARY
LC_MESSAGES LC_PAPER LC_NAME LC_ADDRESS   LC_TELEPHONE LC_MEASUREMENT
LC_IDENTIFICATION LC_ALL;rm -f /tmp/autopkgtest_script_pid; set -C; echo
$$ > /tmp/autopkgtest_script_pid; set +C; trap "rm -f
/tmp/autopkgtest_script_pid" EXIT INT QUIT PIPE; cd "$buildtree"; touch
/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-stdout
/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-stderr; bash -ec 'gfan
_test --gfan gfan' 2> >(tee -a
/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-stderr >&2) > >(tee -a
/tmp/autopkgtest-lxc.tgntdk4i/downtmp/command1-stdout);" (kind: test)
autopkgtest [22:12:48]: test command1: -----------------------]

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