Bug#973225: python-escript: FTBFS: n/Mapping.tex]sh: 1: svnversion: not found
Lucas Nussbaum
lucas at debian.org
Tue Oct 27 17:23:17 GMT 2020
Source: python-escript
Version: 5.5-5
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20201027 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> # Build steps for py3
> mkdir -p /<<PKGBUILDDIR>>/debian/stage3
> scons -j4 cc_optim=' -O3 ' build_dir=/<<PKGBUILDDIR>>/debian/tmp3 verbose=on prefix=/<<PKGBUILDDIR>>/debian/stage3 options_file=debian/sid_options.py docs
> scons: Reading SConscript files ...
> 3.8.6 (default, Sep 25 2020, 09:36:53)
> [GCC 10.2.0]
> Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']]
> Using options in debian/sid_options.py.
> /bin/sh: 1: svnversion: not found
> Using svn revision information from file. Got revision = 6948
> Checking whether the C++ compiler works... yes
> Checking for C++ function gethostname()... yes
> Checking for C++ header file byteswap.h... yes
> Checking for C++ function SCbswap32()... yes
> Checking for C++ header file sys/endian.h... no
> Checking for C++ header file libkern/OSByteOrder.h... no
> Checking for working complex std::acos()... yes
> Checking for C++ header file Python.h... yes
> Checking for C++ function Py_Exit()... yes
> Checking for C++ library boost_python39... yes
> Checking for C++ header file numpy/ndarrayobject.h... yes
> Checking for C++ library netcdf_c++4... yes
> Checking for C++ library siloh5... yes
> Checking for C++ library boost_iostreams... no
> Matplotlib created a temporary config/cache directory at /tmp/matplotlib-0cp7ckep because the default path (/sbuild-nonexistent/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
> Traceback (most recent call last):
> File "<string>", line 1, in <module>
> ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py)
> Chmod("utest.sh", 0755)
> Generated utest.sh.
> Chmod("itest.sh", 0755)
> Generated itest.sh.
> Chmod("/<<PKGBUILDDIR>>/debian/stage3/bin/run-escript", 0755)
> Delete(["debian/stage3/lib/pythonMPI", "debian/stage3/lib/pythonMPIredirect"])
> Delete("debian/stage3/bin/escript-overlord")
> scons: done reading SConscript files.
> scons: Building targets ...
> cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
> This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
> cd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex
> entering extended mode
> LaTeX2e <2020-02-02> patch level 5
> L3 programming layer <2020-09-24>This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
> r.tex
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
> sdoc.cls
> Document Class: esysdoc
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
> Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
> (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))
>
> Package geometry Warning: Over-specification in `h'-direction.
> `width' (478.00812pt) is ignored.
>
> ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.styentering extended mode
> LaTeX2e <2020-02-02> patch level 5
> L3 programming layer <2020-09-24>
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> install.tex
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> esysdoc.cls
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty
> Document Class: esysdoc
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls)
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty
> Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
> (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)))
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
>
> Package geometry Warning: Over-specification in `h'-direction.
> `width' (478.00812pt) is ignored.
>
> ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
> (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg
> (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty
> (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
> (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty
> (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))
> (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
> (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
> (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty
> (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty))
> (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
> (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty
> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
> (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
> (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty))))
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty
> (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
> r_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty
> ****************************************
> * Local config file subfigure.cfg used *
> ****************************************
> (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)
> (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
> (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))))
> (/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty
> (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)
> \@input{elist.aux}
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/eli
> st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
> Package `listing', V1.2, <1999/05/25>
> )))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
> (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/ver
> info.tex))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
> Writing index file user.idx
> (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def
> (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty))
> No file user.aux.
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
> (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)
> *geometry* driver: auto-detecting
> *geometry* detected driver: pdftex
> (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> install_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
> [Loading MPS to PDF converter (version 2006.09.02).]
> )
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
> Package `listing', V1.2, <1999/05/25>
> )
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
> (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty
> (/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty
> Excluding comment 'comment')
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> verinfo.tex))
> Writing index file install.idx
> (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def
> (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
> No file install.aux.
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd))
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [1{/var/lib/texmf/fo
> nts/map/pdftex/updmap/pdftex.map}]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cop
> yrights.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd
> *geometry* driver: auto-detecting
> *geometry* detected driver: pdftex
> (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
> [Loading MPS to PDF converter (version 2006.09.02).]
> ))
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/doc
> guide.tex (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty [2]
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [3
> (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty])
> (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))
>
> LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74.
>
>
> LaTeX Warning: Reference `app:changes' on page 4 undefined on input line 80.
>
>
> LaTeX Warning: Reference `app:ourrefs' on page 4 undefined on input line 85.
>
> [4)]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/cur
> rentdev.tex [5])
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd [6])
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [7]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Tut
> orialPDE.tex [8]
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)
> Chapter 1.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fir
> ststep.tex [1{/var/lib/texmf/fo
> nts/map/pdftex/updmap/pdftex.map}]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> docguide.tex) [2
>
> LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3
> 3.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.1' on page 9 undefined on input line 58
> .
>
> [9] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/
> figures/FirstStepDomain.pdf>] [3]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> intro.tex [4]
> Chapter 1.
>
> LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30.
>
>
> LaTeX Warning: Reference `app:cxxfeatures' on page 5 undefined on input line 31
> .
>
>
> LaTeX Warning: Reference `app:trilinos' on page 5 undefined on input line 33.
>
> ) [5
>
> LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line
> 94.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 9
> 8.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.1.sum' on page 10 undefined on input li
> ne 117.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 1
> 18.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.2d' on page 10 undefined on input line
> 119.
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> LaTeX Warning: Reference `fig:FirstSteps.2' on page 10 undefined on input line
> 145.
>
>
> LaTeX Warning: Reference `Zienc,NumHand' on page 10 undefined on input line 148
> .
>
> [10]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> flatpak.tex [6]]
> Chapter 2.
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty)
>
> LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194.
>
>
> LaTeX Warning: Reference `chap:ripley' on page 11 undefined on input line 194.
>
>
> LaTeX Warning: Reference `chap:speckley' on page 11 undefined on input line 195
> .
>
> [11 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/FirstStepMesh.pdf>]) [7]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> conda.tex [8]
> Chapter 3.
> ) [9]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> docker.tex [10]
> Chapter 4.
> ) [11]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> source.tex [12]
> Chapter 5.
>
> LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 26.
>
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
>
> LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 3
> 7.
>
> [13]
>
> LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 73.
>
>
> LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 96.
>
>
> LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 98.
>
>
> LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 99.
>
>
> LaTeX Warning: Reference `sec:susesrc' on page 14 undefined on input line 100.
>
>
> LaTeX Warning: Reference `sec:centossrc' on page 14 undefined on input line 101
> .
>
>
> LaTeX Warning: Reference `sec:fedorasrc' on page 14 undefined on input line 102
> .
>
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> LaTeX Warning: Reference `sec:macportsrc' on page 14 undefined on input line 10
> 3.
>
>
> LaTeX Warning: Reference `sec:homebrewsrc' on page 14 undefined on input line 1
> 04.
>
>
> LaTeX Warning: Reference `sec:freebsdsrc' on page 14 undefined on input line 10
> 5.
>
>
> LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 108.
>
> [14]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex
>
>
> LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2
> 05.
>
>
> LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line
> 214.
>
>
> LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223.
>
>
> [12]This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
>
> Underfull \hbox (badness 10000) in paragraph at lines 152--153
>
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> Underfull \hbox (badness 10000) in paragraph at lines 195--196
>
> [15]
>
> LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312.
>
>
> LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317.
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>
> [13]
>
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>
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> Overfull \hbox (19.96072pt too wide) in paragraph at lines 266--267
> [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
> [16]entering extended mode
> LaTeX2e <2020-02-02> patch level 5
> L3 programming layer <2020-09-24>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /cookbook.tex
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /esysdoc.cls
> Document Class: esysdoc
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
> Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
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> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) [14 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /user/figures/FirstStepResultMATPLOTLIB.pdf>]
>
> Package geometry Warning: Over-specification in `h'-direction.
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>
> ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
>
> LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 307.
>
> Excluding 'comment' comment. [17cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex
> ]
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd))
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) [18
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty])
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
>
> LaTeX Warning: Reference `app:trilinos' on page 19 undefined on input line 481.
>
>
> )
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty [19]
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> cxx11.tex
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) [20]
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> Appendix A.
> )
>
> LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line
> 407.
>
>
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>
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>
>
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>
> [15
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty [21
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))] </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/FirstStepResult.pdf
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> trilinos.tex]) [22]
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)
>
> LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line
> 470.
>
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dif
> fusion.tex
> Appendix B.
> [23] (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty [24
>
> LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2
> 4.
>
>
> LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin
> e 32.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin
> e 35.
>
>
> LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li
> ne 36.
>
>
> LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49.
>
> [16])
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> install.aux </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/DiffusionDomain.pdf
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> intro.aux>)]
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> flatpak.aux)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> conda.aux)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> docker.aux)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> source.aux)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> cxx11.aux)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/install/
> trilinos.aux))
>
> Package rerunfilecheck Warning: File `install.out' has changed.
> (rerunfilecheck) Rerun to get outlines right
> (rerunfilecheck) or use package `bookmark'.
>
>
> LaTeX Warning: There were undefined references.
>
>
> LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.
>
> )
> (see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
> knappen/ec/tctt1000.600pkThis is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
> >{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
> r.enc}</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb)>
> </usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb
> (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty
>
> LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li
> ne 72.
>
>
> LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li
> ne 79.
>
>
> LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li
> ne 92.
>
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> ne 98.
>
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> LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li
> ne 104.
>
>
> LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input
> line 121.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li
> ne 126.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li
> ne 127.
>
>
> LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin
> e 136.
>
>
> LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on
> input line 145.
>
>
> LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on
> input line 153.
>
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> LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on
> input line 154.
>
>
> LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on
> input line 154.
>
>
> LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156.
>
> [17>)</usr/s
> hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty>]</usr/share/t
> exlive/texmf-dist/fonts/type1/urw/courier/ucrr8a.pfb
> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)>
> (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty</usr/share/texlive/texmf-
> dist/fonts/type1/urw/courier/ucrro8a.pfb
> (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)></usr/share/texlive/texmf-dist/fonts/t
> ype1/urw/helvetic/uhvb8a.pfb)>
> (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty</usr/share/texlive/texmf-dist/fonts/type1/urw/hel
> vetic/uhvr8a.pfb)
> (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty>)</usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8
> a.pfb
> (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb)
> (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)>
> (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty</usr/sha
> re/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb)
> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)>
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty</usr/share/texlive/texm
> f-dist/fonts/type1/urw/times/utmri8a.pfb>)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def
> Output written on install.pdf (24 pages, 150390 bytes).
> Transcript written on install.log.
> )cd debian/tmp3/posix/doc/install && bibtex install
>
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li
> ne 161.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li
> ne 161.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li
> ne 177.
>
>
> LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on
> input line 179.
>
> [18)]
> (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
> (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))entering extended mode
> LaTeX2e <2020-02-02> patch level 5
> L3 programming layer <2020-09-24>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/inversion.tex
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/esysdoc.clsThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: install.aux
> I found no \citation commands---while reading file install.aux
> I found no \bibdata command---while reading file install.aux
> I found no \bibstyle command---while reading file install.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
>
> Document Class: esysdoc
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
> Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
> (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clocd debian/tmp3/posix/doc/install && bibtex intro
>
> (/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty)
>
> LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274.
>
>
> LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li
> ne 306.
>
> [19)])
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty))
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
>
> Package geometry Warning: Over-specification in `h'-direction.
> `width' (478.00812pt) is ignored.
>
> ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
> (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: intro.aux
> I found no \citation commands---while reading file intro.aux
> I found no \bibdata command---while reading file intro.aux
> I found no \bibstyle command---while reading file intro.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
>
> (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.stycd debian/tmp3/posix/doc/install && bibtex flatpak
>
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty
>
> LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l
> ine 318.
>
> [20)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))]))
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /cookbook_defs.tex
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty
> (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty
> ****************************************
> * Local config file subfigure.cfg used *
> ****************************************
> (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)))
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty)
>
> LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4
> 03.
>
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/wav
> e.tex
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def
> (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)))
> (/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty
>
> LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61.
>
> [21This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: flatpak.aux
> I found no \citation commands---while reading file flatpak.aux
> I found no \bibdata command---while reading file flatpak.aux
> I found no \bibstyle command---while reading file flatpak.aux
> (There were 3 error messages)
> ))bibtex returned an error, check the blg file
>
> (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/DiffusionRes1.pdf> </<<PKGBUILDDIR>>/de
> bian/tmp3/posix/doc/user/figures/DiffusionRes16.pdfcd debian/tmp3/posix/doc/install && bibtex conda
> > </build/python-escript-AYd
> zSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/DiffusionRes32.pdf> <
> /<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/figu
> res/DiffusionRes48.pdf>]
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty
>
> LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87.
>
>
> LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96.
>
>
> LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97.
>
>
> LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105
> .
>
> [22) </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/waveu.pdf, page is rotated 90 degrees>]
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
>
> LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121.
>
>
> [23 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/wavea.pdf, page is rotated 90 degrees>)])
> (/usr/share/texlive/texmf-dist/tex/latex/float/float.styThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: conda.aux
> I found no \citation commands---while reading file conda.aux
> I found no \bibdata command---while reading file conda.aux
> I found no \bibstyle command---while reading file conda.aux
> (There were 3 error messages)
> )bibtex returned an error, check the blg file
>
> (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.stycd debian/tmp3/posix/doc/install && bibtex docker
> )
> (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))
> (/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
> \gdef\@extra at binfo{@-1}\@writefile{toc}{\gdef \the at ipfilectr{@-1}}\@writefile{l
> of}{\gdef \the at ipfilectr{@-1}}\@writefile{lot}{\gdef \the at ipfilectr{@-1}}
> \@input{elist.aux}
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /elist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty
> (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty
> Package `listing', V1.2, <1999/05/25>
> ))))
> \gdef\@extra at binfo{}\@writefile{toc}{\gdef \the at ipfilectr{}}\@writefile{lof}{\g
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> ) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty
> (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /verinfo.tex))
> Writing index file cookbook.idx
> (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def
> (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty))
> No file cookbook.aux.
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)
> (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: docker.aux
> I found no \citation commands---while reading file docker.aux
> I found no \bibdata command---while reading file docker.aux
> I found no \bibstyle command---while reading file docker.aux
> (There were 3 error messages)
>
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.stybibtex returned an error, check the blg file
>
>
> LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214.
>
> [24cd debian/tmp3/posix/doc/install && bibtex source
> )]
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty
> *geometry* driver: auto-detecting
> *geometry* detected driver: pdftex
> (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii)
> [Loading MPS to PDF converter (version 2006.09.02).]
> ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
> (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
> (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.styThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: source.aux
> I found no \citation commands---while reading file source.aux
> I found no \bibdata command---while reading file source.aux
> I found no \bibstyle command---while reading file source.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> )
> (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.stycd debian/tmp3/posix/doc/install && bibtex cxx11
>
> (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)))
>
> LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line
> 228.
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> Output written on install.pdf (24 pages, 153108 bytes).
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> [23cd /<<PKGBUILDDIR>>/doc && tar -cf /<<PKGBUILDDIR>>/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh
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> r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>>] [34]
> Output written on inversion.pdf (86 pages, 5247898 bytes).
> Transcript written on inversion.log.
>
> Chapter 4.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example04.tex [71cd debian/tmp3/posix/doc/inversion && bibtex elist
> ]
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> LaTeX Warning: Citation `lazyauspdc' on page 72 undefined on input line 2248.
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> [35]]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
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> cd debian/tmp3/posix/doc/inversion && bibtex inversion
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> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex CookGravity
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> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorld.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SplitWorldException.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SplitWorldException.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SubWorld.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/system_dep.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/system_dep.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/SystemMatrixException.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/SystemMatrixException.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Taipan.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Taipan.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Taipan.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Taipan.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TestDomain.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/TransportProblemException.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/TransportProblemException.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Utils.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Utils.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/Utils.h...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/Utils.h...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.cpp...
> Parsing file /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.cpp...
> Preprocessing /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.h...
> Parsing fiThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: CookJointDUMMY.aux
> I found no \citation commands---while reading file CookJointDUMMY.aux
> I found no \bibdata command---while reading file CookJointDUMMY.aux
> I found no \bibstyle command---while reading file CookJointDUMMY.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex CookDcRes
> le /<<PKGBUILDDIR>>/escriptcore/src/WrappedArray.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_addToSystemMatrix.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_addToSystemMatrix.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_AverageElementData.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_AverageElementData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyElementData.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyElementData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyNodalData.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_CopyNodalData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getAssembleParameters.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getAssembleParameters.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getNormal.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getNormal.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_getSize.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_getSize.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_gradient.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_gradient.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_integrate.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_integrate.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_interpolate.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_interpolate.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_jacobians.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_jacobians.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_LumpedSystem.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_LumpedSystem.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_NodeCoordinates.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_NodeCoordinates.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Points.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Points.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_2D.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_2D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_3D.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_Single_3D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_2D.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_2D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Assemble_PDE_System_3D.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Assemble_This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: CookDcRes.aux
> I found no \bibdata command---while reading file CookDcRes.aux
> I found no \bibstyle command---while reading file CookDcRes.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex IntroPart2
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: IntroPart2.aux
> I found no \bibdata command---while reading file IntroPart2.aux
> I found no \bibstyle command---while reading file IntroPart2.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex Domains
> PDE_System_3D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DomainFactory.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DomainFactory.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DomainFactory.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DomainFactory.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Dudley.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Dudley.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/dudleycpp.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/dudleycpp.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyException.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyException.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/DudleyVersion.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/DudleyVersion.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_createColoring.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_createColoring.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_distributeByRankOfDOF.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_distributeByRankOfDOF.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementFile_jacobians.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementFile_jacobians.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ElementType.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ElementType.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/IndexList.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/IndexList.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/IndexList.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/IndexList.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_distributeByRankOfDOF.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_distributeByRankOfDOF.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_getPattern.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_getPattern.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFDistribution.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFDistribution.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFLabeling.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_optimizeDOFLabeling.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_read.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_read.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/MThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: Domains.aux
> I found no \bibdata command---while reading file Domains.aux
> I found no \bibstyle command---while reading file Domains.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex Minimization
> esh_readGmsh.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_readGmsh.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_resolveNodeIds.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_resolveNodeIds.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_tet4.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_tet4.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_tri3.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_tri3.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Mesh_write.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Mesh_write.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createMappings.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createMappings.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_createTrilinosGraph.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_createTrilinosGraph.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeFile_gather.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeFile_gather.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/NodeMapping.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/NodeMapping.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ShapeTable.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ShapeTable.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/ShapeTable.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/ShapeTable.h...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Util.cpp...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Util.cpp...
> Preprocessing /<<PKGBUILDDIR>>/dudley/src/Util.h...
> Parsing file /<<PKGBUILDDIR>>/dudley/src/Util.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_addToSystemMatrix.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_addToSystemMatrix.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_AverageElementData.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_AverageElementData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_CopyElementData.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_CopyElementData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_CopyNodalData.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_CopyNodalData.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getAssembleParameters.cpp...
> Parsing file /<<PKGBUILDDIR>>/fin>]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: Minimization.aux
> I found no \bibdata command---while reading file Minimization.aux
> I found no \bibstyle command---while reading file Minimization.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> [87cd debian/tmp3/posix/doc/inversion && bibtex CostFunctions
> </<<BUILDDIR>>/python-escri
> pt-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: CostFunctions.aux
> I found no \bibdata command---while reading file CostFunctions.aux
> I found no \bibstyle command---while reading file CostFunctions.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex DataSources
> ley/src/Assemble_getAssembleParameters.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getNormal.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_getNormal.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_getSize.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_getSize.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_gradient.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_gradient.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_integrate.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_integrate.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_interpolate.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_interpolate.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_jacobians.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_jacobians.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_LumpedSystem.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_LumpedSystem.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_NodeCoordinates.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_NodeCoordinates.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Points.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Points.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_1D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_1D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_2D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_2D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_3D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_3D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_C.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_Single_C.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_1D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_1D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_2D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_2D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_3D.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_3D.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_C.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Assemble_PDE_System_C.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/DomainFactory.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/DomainFactory.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/DomainFactory.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/DomainFactory.h...
> Preprocessing /<<PKGBUILDDIR>>/finleyThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: DataSources.aux
> I found no \bibdata command---while reading file DataSources.aux
> I found no \bibstyle command---while reading file DataSources.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex Regularization
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: Regularization.aux
> I found no \bibdata command---while reading file Regularization.aux
> I found no \bibstyle command---while reading file Regularization.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex Mapping
> /src/ElementFile.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/ElementFile.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/ElementFile.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/ElementFile.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/ElementFile_jacobians.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/ElementFile_jacobians.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Finley.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Finley.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/finleycpp.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/finleycpp.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyException.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyException.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/FinleyVersion.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/FinleyVersion.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/IndexList.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/IndexList.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/IndexList.h...
> Parsing file /<<PKGBUILDDIR>>/finley/src/IndexList.h...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_addPoints.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_addPoints.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_findMatchingFaces.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_findMatchingFaces.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_getPasoPattern.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_getPasoPattern.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_getTrilinosGraph.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_getTrilinosGraph.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_glueFaces.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_glueFaces.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_hex20.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_hex20.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_hex8.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_hex8.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_joinFaces.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_joinFaces.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_merge.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_merge.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_optimizeDOFDistribution.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_optimizeDOFDistribution.cpp...
> Preprocessing /<<PKGBUILDDIR>>/finley/src/Mesh_read.cpp...
> Parsing file /<<PKGBUILDDIR>>/finley/src/Mesh_read.cpp...
> Preprocessing /<<BUILDDIR>>/python-This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: Mapping.aux
> I found no \citation commands---while reading file Mapping.aux
> I found no \bibdata command---while reading file Mapping.aux
> I found no \bibstyle command---while reading file Mapping.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && bibtex ForwardModels
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: ForwardModels.aux
> I found no \bibdata command---while reading file ForwardModels.aux
> I found no \bibstyle command---while reading file ForwardModels.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/inversion && makeindex inversion.idx
> > </build/python
> -escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_v
> alet_u_1.pngThis is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support).
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> Generating output file inversion.ind....done (94 lines written, 0 warnings).
> Output written in inversion.ind.
> Transcript written in inversion.ilg.
> cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex
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> [19] [20 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /inversion/figures/QLDGravContourMu01.png (PNG copy)> </build/python-escript-AY
> dzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourM
> u1.png (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3
> /posix/doc/inversion/figures/QLDGravContourMu100.png (PNG copy)> </build/python
> -escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDG
> ravContourMu1000.png (PNG copy)>] [21 </<<BUILDDIR>>/python-escr
> ipt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu01.png (PNG copy)
> > </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/invers
> ion/figures/QLDGravDepthMu1.png (PNG copy)> </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu10.png (PNG
> copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
> inversion/figures/QLDGravDepthMu100.png (PNG copy)> </build/python-escript-AYdz
> Sv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu100
> 0.png (PNG copy)>]>]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
> ad.tex [22 </<<PKGBUILDDIR>>/debian/
> tmp3/posix/doc/inversion/figures/onshore-offshore.png
> Chapter 5.
>
> LaTeX Warning: Citation `GMSH' on page 91 undefined on input line 24.
>
> [91]/<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:4698: warning: no matching class member found for
> DataTypes::CplxVectorType::reference Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
> Possible candidates:
> 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)'
> 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)'
>
> /<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:4706: warning: no matching class member found for
> DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
> Possible candidates:
> 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)'
> 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)'
>
> /<<PKGBUILDDIR>>/escriptcore/src/Data.cpp:5668: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined.
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:1971: warning: no uniquely matching class member found for
> DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy)
> Possible candidates:
> 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
> 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:2003: warning: no uniquely matching class member found for
> const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const
> Possible candidates:
> 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
> 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /<<PKGBUILDDIR>>/escriptcore/src/Data.h
>
>
>
> LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 89.
>
>
> LaTeX Warning: Reference `ESCRIPT CHAP' on page 92 undefined on input line 125.
>
>
>
> LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 133.
>
>
> LaTeX Warning: Reference `fig:PYCAD 0' on page 92 undefined on input line 140.
>
>
> LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 145.
>
>
> LaTeX Warning: Reference `chap:finley' on page 92 undefined on input line 145.
>
>
> LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 154.
>
>
> LaTeX Warning: Reference `fig:PYCAD 1' on page 92 undefined on input line 158.
>
> [92]/<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for
> DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const
> Possible candidates:
> 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const'
> 'DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const'
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.cpp:1040: warning: no matching class member found for
> DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
> Possible candidates:
> 'DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)'
> 'DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)'
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:745: warning: no matching class member found for
> DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy)
> Possible candidates:
> 'DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)'
> 'DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)'
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:56: warning: no matching file member found for
> void escript::DataTypes::pointToStream(std::ostream &os, const CplxVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep)
> Possible candidates:
> 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for
> void escript::DataTypes::pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep)
> Possible candidates:
> 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for
> std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< cplx_t > &data, const ShapeType &shape, int offset, const std::string &prefix)
> Possible candidates:
> 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:492: warning: no matching file member found for
> std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< real_t > &data, const ShapeType &shape, int offset, const std::string &prefix)
> Possible candidates:
> 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for
> void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< real_t > &dest, RealVectorType::size_type doffset, RealVectorType::size_type nvals, const RealVectorType &src, RealVectorType::size_type soffset)
> Possible candidates:
> 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:569: warning: no matching file member found for
> void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< cplx_t > &dest, CplxVectorType::size_type doffset, CplxVectorType::size_type nvals, const CplxVectorType &src, CplxVectorType::size_type soffset)
> Possible candidates:
> 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVector.cpp:585: warning: no matching file member found for
> void escript::DataTypes::fillComplexFromReal(const escript::DataTypes::DataVectorAlt< real_t > &r, CplxVectorType &c)
> Possible candidates:
> 'void fillComplexFromReal(const RealVectorType &r, CplxVectorType &c)' at line 155 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVector.h
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVectorAlt.h:265: warning: no matching class member found for
> template < T >
> escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(escript::DataTypes::DataVectorAlt< T >::long size, const DataVectorAlt< T >::value_type val, const DataVectorAlt< T >::size_type blockSize)
> Possible candidates:
> 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt()'
> 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const DataVectorAlt< T > &other)'
> 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const size_type size, const value_type val=0.0, const size_type blockSize=1)'
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:201: warning: no matching file member found for
> void escript::hermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset)
> Possible candidates:
> 'void hermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, DataTypes::CplxVectorType::size_type evOffset)' at line 916 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp
>
> /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:220: warning: no matching file member found for
> void escript::antihermitian(const &in, const std::vector< int > &inShape, long inOffset, &ev, const std::vector< int > &evShape, long evOffset)
> Possible candidates:
> 'void antihermitian(const DataTypes::CplxVectorType &in, const DataTypes::ShapeType &inShape, typename DataTypes::CplxVectorType::size_type inOffset, DataTypes::CplxVectorType &ev, const DataTypes::ShapeType &evShape, typename DataTypes::CplxVectorType::size_type evOffset)' at line 963 of file /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.cpp
>
> [93 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /user/figures/quad.pdf>]/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp:1297: warning: no uniquely matching class member found for
> void dudley::DudleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const
> Possible candidates:
> 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 514 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
> 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 516 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
>
> /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.cpp:1303: warning: no uniquely matching class member found for
> void dudley::DudleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const
> Possible candidates:
> 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 514 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
> 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 516 of file /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h
>
> >]/<<PKGBUILDDIR>>/dudley/src/NodeFile_createDenseLabelings.cpp:139: warning: no matching class member found for
> dim_t dudley::NodeFile::createDenseNodeLabeling(std::vector< index_t > &nodeDistribution, const std::vector< index_t > &dofDistribution)
> Possible candidates:
> 'dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)'
> 'dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)'
>
>
>
> LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219.
>
>
> LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251.
>
> [94) [23 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/trapezoid.pdf>]]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/CookMagnetic.tex/<<PKGBUILDDIR>>/finley/src/ElementFile.cpp:205: warning: no matching class member found for
> void finley::ElementFile::relabelNodes(const std::vector< index_t > &newNode, index_t offset)
> Possible candidates:
> 'void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)'
> 'void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)'
>
> [24]/<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp:1699: warning: no uniquely matching class member found for
> void finley::FinleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const
> Possible candidates:
> 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 635 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
> 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 637 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
>
> /<<PKGBUILDDIR>>/finley/src/FinleyDomain.cpp:1705: warning: no uniquely matching class member found for
> void finley::FinleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const
> Possible candidates:
> 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 635 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
> 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 637 of file /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h
>
> /<<PKGBUILDDIR>>/paso/src/Options.cpp:32: warning: no matching class member found for
> paso::Options::Options(const bp::object &options)
> Possible candidates:
> 'paso::Options::Options()'
> 'paso::Options::Options(const boost::python::object &options)'
>
>
> Chapter 2.
>
> Underfull \hbox (badness 10000) in paragraph at lines 7--7
> []\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \
> OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file
> [25] [26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /inversion/figures/QLDWestMagneticDataPlot.png [95 </<<PKGBUILDDIR>>/d
> ebian/tmp3/posix/doc/user/figures/brick.pdf>]/<<PKGBUILDDIR>>/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for
> escript::Data ripley::Brick::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const
> Possible candidates:
> 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 188 of file /<<PKGBUILDDIR>>/ripley/src/Brick.h
> 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /<<PKGBUILDDIR>>/speckley/src/Brick.h
>
> /<<PKGBUILDDIR>>/ripley/src/Brick.cpp:3737: warning: no uniquely matching class member found for
> escript::Data ripley::Brick::randomFillWorker(const std::vector< int > &shape, long seed, const bp::tuple &filter) const
> Possible candidates:
> 'virtual escript::Data ripley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 274 of file /<<PKGBUILDDIR>>/ripley/src/Brick.h
> 'escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 337 of file /<<PKGBUILDDIR>>/speckley/src/Brick.h
>
>
>
> LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 339.
>
>
> LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 358.
>
> [96 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/refine.pdf>] [97]/<<PKGBUILDDIR>>/ripley/src/Rectangle.cpp:2532: warning: no uniquely matching class member found for
> escript::Data ripley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const
> Possible candidates:
> 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /<<PKGBUILDDIR>>/ripley/src/Rectangle.h
> 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /<<PKGBUILDDIR>>/speckley/src/Rectangle.h
>
> [98]
>
> LaTeX Warning: Citation `GMSH' on page 99 undefined on input line 579.
>
>
> LaTeX Warning: Citation `RIGHTHANDRULE' on page 99 undefined on input line 600.
>
>
> [99]
>
> LaTeX Warning: Citation `GMSH' on page 100 undefined on input line 682.
>
> [100]
>
> LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698.
>
>
> LaTeX Warning: Citation `IDEAS' on page 101 undefined on input line 702.
>
>
> LaTeX Warning: Citation `VRML' on page 101 undefined on input line 706.
>
>
> LaTeX Warning: Citation `STL' on page 101 undefined on input line 710.
>
>
> LaTeX Warning: Citation `NASTRAN' on page 101 undefined on input line 714.
>
>
> LaTeX Warning: Citation `MEDIT' on page 101 undefined on input line 718.
>
>
> LaTeX Warning: Citation `CGNS' on page 101 undefined on input line 722.
>
>
> LaTeX Warning: Citation `PLOT3D' on page 101 undefined on input line 726.
>
>
> LaTeX Warning: Citation `DIFFPACK' on page 101 undefined on input line 730.
>
>
> LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 734.
>
>
> LaTeX Warning: Citation `TETGEN' on page 101 undefined on input line 734.
>
>
> LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 738.
>
>
> LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742.
>
> [101] [102]/<<PKGBUILDDIR>>/speckley/src/Rectangle.cpp:1258: warning: no uniquely matching class member found for
> escript::Data speckley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const
> Possible candidates:
> 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /<<PKGBUILDDIR>>/ripley/src/Rectangle.h
> 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /<<PKGBUILDDIR>>/speckley/src/Rectangle.h
>
> ) [103]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/Mod
> els.tex [104]
> Chapter 6.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
> kessolver.tex
>
> LaTeX Warning: Reference `Stokes 1' on page 105 undefined on input line 50.
>
>
> LaTeX Warning: Reference `Stokes 2' on page 105 undefined on input line 50.
>
>
> LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 105 undefined on input line
> 69.
>
>
> LaTeX Warning: Citation `MBENZI2005' on page 105 undefined on input line 69.
>
>
> LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 73.
>
>
> LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 88.
>
> [105]
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 95.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
> ne 98.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 98.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 113.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
> ne 117.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 118.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
> ne 121.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li
> ne 125.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 139.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 143.
>
>
> LaTeX Warning: Citation `ELMAN' on page 106 undefined on input line 148.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 160.
>
>
> LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li
> ne 169.
>
> [106]
>
> LaTeX Warning: Reference `STOKES total V1' on page 107 undefined on input line
> 187.
>
>
> LaTeX Warning: Reference `STOKES total P2' on page 107 undefined on input line
> 187.
>
>
> LaTeX Warning: Reference `STOKES total V2' on page 107 undefined on input line
> 187.
>
>
> LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 107 undefined on in
> put line 221.
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>
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> Building macro definition list...
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> Transcript written on inversion.log.
> cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex
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> Chapter 13.
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> Appendix A.
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> t/fonts/type1/public/amsfonts/symbols/msbm10.pfb></usr/share/texlive/texmf-dist
> /fonts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
> urw/courier/ucrr8a.pfb> [12</usr/share/texlive/texmf-dist/fonts/type1/urw/courier/u
> crro8a.pfb </buil
> d/python-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figu
> res/QLDWestGravityDataPlot.png></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb><
> /usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/t
> exlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texm
> f-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/ty
> pe1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/u
> tmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb
> Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88
> \OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for
> the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th
> e []
>
> LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line
> 127.
>
> [42]> [43pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.4.5}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.134 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/heatrefraction.png</us
> r/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb></usr/share/texlive
> /texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
> Output written on user.pdf (176 pages, 2591949 bytes).
> Transcript written on user.log.
> cd debian/tmp3/posix/doc/user && bibtex elist
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: elist.aux
> I found no \citation commands---while reading file elist.aux
> I found no \bibdata command---while reading file elist.aux
> I found no \bibstyle command---while reading file elist.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex user
> >]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: user.aux
> The style file: plain.bst
> Database file #1: esys.bib
> cd debian/tmp3/posix/doc/user && bibtex user
>
> Underfull \hbox (badness 10000) in paragraph at lines 137--142
>
>
> LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179.
>
> [44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.4.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.199 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/heatrefractiontdp.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: user.aux
> The style file: plain.bst
> Database file #1: esys.bib
> cd debian/tmp3/posix/doc/user && bibtex TutorialPDE
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: TutorialPDE.aux
> I found no \bibdata command---while reading file TutorialPDE.aux
> I found no \bibstyle command---while reading file TutorialPDE.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex execute
> >] [13 </<<BUILDDIR>>/python-escri
> pt-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravContourMu10.png (PNG copy
> )>]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: execute.aux
> I found no \bibdata command---while reading file execute.aux
> I found no \bibstyle command---while reading file execute.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> > </<<BUILDDIR>>/
> python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractiontgdp.pn
> g [14cd debian/tmp3/posix/doc/user && bibtex escript
> ] [15 </<<PKGBUILDDIR>>/debian/tmp3/posix
> /doc/inversion/figures/dom2D.pdf> </<<BUILDDIR>>/python-escript-
> 5.5/debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf
>
> pdfTeX warning: pdflatex (file /<<PKGBUILDDIR>>/
> debian/tmp3/posix/doc/inversion/figures/dom2DFEM.pdf): PDF inclusion: multiple
> pdfs with page group included in a single page
> >] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [16] [17]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: escript.aux
> I found no \bibdata command---while reading file escript.aux
> I found no \bibstyle command---while reading file escript.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
>
> [18cd debian/tmp3/posix/doc/user && bibtex linearPDE
> ]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: linearPDE.aux
> I found no \bibdata command---while reading file linearPDE.aux
> I found no \bibstyle command---while reading file linearPDE.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex pycad
> [19] [20 </<<PKGBUILDDIR>>/debian/tmp3/posi
> x/doc/inversion/figures/QLDGravContourMu01.png (PNG copy)> </build/python-escri
> pt-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravCon
> tourMu1.png (PNG copy)> </<<PKGBUILDDIR>>/debian
> /tmp3/posix/doc/inversion/figures/QLDGravContourMu100.png (PNG copy)> </build/p
> ython-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures
> /QLDGravContourMu1000.png (PNG copy)>] [21 </<<BUILDDIR>>/python
> -escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu01.png (PNG
> copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/i
> nversion/figures/QLDGravDepthMu1.png (PNG copy)> </<<BUILDDIR>>/
> python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepthMu10.png
> (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix
> /doc/inversion/figures/QLDGravDepthMu100.png (PNG copy)> </build/python-escript
> -AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDGravDepth
> Mu1000.png (PNG copy)>] [22 </<<PKGBUILDDIR>>/de
> bian/tmp3/posix/doc/inversion/figures/onshore-offshore.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: pycad.aux
> I found no \bibdata command---while reading file pycad.aux
> I found no \bibstyle command---while reading file pycad.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex Models
> > </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookb
> ook/figures/heatrefractiontcdp.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: Models.aux
> I found no \bibdata command---while reading file Models.aux
> I found no \bibstyle command---while reading file Models.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex finley
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: finley.aux
> I found no \bibdata command---while reading file finley.aux
> I found no \bibstyle command---while reading file finley.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex ripley
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: ripley.aux
> I found no \citation commands---while reading file ripley.aux
> I found no \bibdata command---while reading file ripley.aux
> I found no \bibstyle command---while reading file ripley.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> > </<<BUILDDIR>>/python-escrip
> t-5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefractionhf.pngcd debian/tmp3/posix/doc/user && bibtex speckley
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: speckley.aux
> I found no \citation commands---while reading file speckley.aux
> I found no \bibdata command---while reading file speckley.aux
> I found no \bibstyle command---while reading file speckley.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex weipa
> >]) [23]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/CookMagnetic.tex [24]This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: weipa.aux
> I found no \bibdata command---while reading file weipa.aux
> I found no \bibstyle command---while reading file weipa.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex trilinos
>
> Chapter 2.
>
> Underfull \hbox (badness 10000) in paragraph at lines 7--7
> []\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \
> OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file
> [25] [26 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /inversion/figures/QLDWestMagneticDataPlot.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: trilinos.aux
> I found no \bibdata command---while reading file trilinos.aux
> I found no \bibstyle command---while reading file trilinos.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> >]cd debian/tmp3/posix/doc/user && bibtex symbolic
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: symbolic.aux
> I found no \bibdata command---while reading file symbolic.aux
> I found no \bibstyle command---while reading file symbolic.aux
> (There were 2 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && bibtex subworlds
> This is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: subworlds.aux
> I found no \citation commands---while reading file subworlds.aux
> I found no \bibdata command---while reading file subworlds.aux
> I found no \bibstyle command---while reading file subworlds.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
>
>
> LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line
> 204.
>
>
> Underfull \hbox (badness 10000) in paragraph at lines 202--209
>
>
> LaTeX Warning: Reference `Sec:2DHD plot' on page 46 undefined on input line 210
> .
>
>
> Overfull \hbox (5.0533pt too wide) in paragraph at lines 210--216
> []\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion []. To sho
> w sub-domains, we need to go back to []
>
> LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line
> 284.
>
> [46cd debian/tmp3/posix/doc/user && bibtex appendix
> ] [47pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.4.7}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.291 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/heatrefractionflux.pngThis is BibTeX, Version 0.99d (TeX Live 2020/Debian)
> The top-level auxiliary file: appendix.aux
> I found no \citation commands---while reading file appendix.aux
> I found no \bibdata command---while reading file appendix.aux
> I found no \bibstyle command---while reading file appendix.aux
> (There were 3 error messages)
> bibtex returned an error, check the blg file
> cd debian/tmp3/posix/doc/user && makeindex user.idx
> or file Assemble_getNormal.cpp...
> Parsing code for file Assemble_getNormal.cpp...
> Parsing code for file Assemble_getSize.cpp...
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> Generating code for file Distribution.h...
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> GeneratThis is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support).
> Scanning input file user.idx....done (716 entries accepted, 12 rejected).
> Sorting entries........done (7122 comparisons).
> Generating output file user.ind....done (353 lines written, 0 warnings).
> Output written in user.ind.
> Transcript written in user.ilg.
> cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex
> > </<<BUILDDIR>>/p
> ython-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu01.png
> (PNG copy)>]This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
> restricted \write18 enabled.
> ) [27] [28 </<<PKGBUILDDIR>>/debian
> /tmp3/posix/doc/inversion/figures/QLDMagContourMu0001.png (PNG copy)> </build/p
> ython-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures
> /QLDMagContourMu001.png (PNG copy)> </<<BUILDDIR>>/python-escrip
> t-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagContourMu1.png (PNG copy)>
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/figures/QLDMagContourMu10.png (PNG copy)>] [29 </<<BUILDDIR>>/
> python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthMu0001.pn
> g (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp3/posi
> x/doc/inversion/figures/QLDMagDepthMu001.png (PNG copy)> </build/python-escript
> -AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDepthM
> u01.png (PNG copy)> </<<PKGBUILDDIR>>/debian/tmp
> 3/posix/doc/inversion/figures/QLDMagDepthMu1.png (PNG copy)> </build/python-esc
> ript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/inversion/figures/QLDMagDe
> pthMu10.png (PNG copy)>]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/CookJointDUMMY.tex [30]
> Chapter 3.
> ) [31]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/inversio
> n/CookDcRes.tex [32]
> Chapter 4.
> [33]entering extended mode
> LaTeX2e <2020-02-02> patch level 5
> L3 programming layer <2020-09-24>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/use
> r.tex
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/esy
> sdoc.cls
> Document Class: esysdoc
> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
> Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
> (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) [34 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc
> /inversion/figures/HalfSphere.png)
> (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))
>
> Package geometry Warning: Over-specification in `h'-direction.
> `width' (478.00812pt) is ignored.
>
> ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))
> (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
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> (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
> (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
> For additional information on amsmath, use the `?' option.
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
> (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
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> (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
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> (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
> (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def>])
> (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
>
> LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line
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>
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> }) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
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> pdf> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
> r/figures/DiffusionRes48.pdf>] [24 </<<BUILDDIR>>/python-escript
> -5.5/debian/tmp3/posix/doc/user/figures/waveu.pdf, page is rotated 90 degrees>]
>
> Underfull \hbox (badness 10000) in paragraph at lines 218--223
>
>
> LaTeX Warning: Reference `fig:tvsource' on page 59 undefined on input line 228.
>
>
> [59pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.273 t=
> t+h; n=n+1 </<<PKGBUILDDIR>>/debian/tmp3
> /posix/doc/cookbook/figures/source.png
> Output written on inversion.pdf (90 pages, 5274044 bytes).
> Transcript written on inversion.log.
> [25 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/use
> r/figures/wavea.pdf, page is rotated 90 degrees>]Install file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf"
> [26]Mkdir("/<<PKGBUILDDIR>>/debian/stage3/release/doc/sphinx_api")
> Mkdir("/<<PKGBUILDDIR>>/debian/tmp3/sphinx_int")
> Touch("debian/stage3/esys/__init__.py")
> [27]/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc
> >]
>
> LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 346.
>
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)
>
> LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 359.
>
> [28 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/Wave11.pdf> </<<PKGBUILDDIR>>/debian/tm
> p3/posix/doc/user/figures/Wave22.pdf> </<<BUILDDIR>>/python-escr
> ipt-5.5/debian/tmp3/posix/doc/user/figures/Wave28.pdf> </build/python-escript-A
> YdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wave32.pdf> </build
> /python-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/Wa
> ve36.pdf>]
>
> LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396.
>
>
> LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398.
>
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/hea
> tedblock.tex
>
> Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin
> e 293.
>
> [60 [29] </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/user/figures/WavePC.pdf, page is rotated 90 degrees>] [30]Install file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc"
>
>
> LaTeX Warning: Reference `fig:abconds' on page 61 undefined on input line 347.
>
> [61pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.392 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex08babc.png/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc
> [31])
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sto
> kesflow.tex [32 </<<PKGBUILDDIR>>/debian/tmp3/po
> six/doc/user/figures/HeatedBlock.pdf>]
>
> LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106.
>
> [33Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc"
> ]/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc
> >] [62pdfTeX warning (ext4): destination
> with the same identifier (name{figure.6.4}) has been already used, duplicate ig
> nored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.392 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex08sw060.png (PNG copy)> </build/python-escript-AYdz
> Sv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG
> copy)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/
> cookbook/figures/ex08sw660.png (PNG copy)> </<<BUILDDIR>>/python
> -escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>])
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/sli
> p.tex [34] [35 </<<PKGBUILDDIR>>/debian/tmp3/pos
> ix/doc/user/figures/stokes-fluid-t01.pdf> </<<BUILDDIR>>/python-
> escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t10.pdf> </build/py
> thon-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/stoke
> s-fluid-t20.pdf> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/user/figures/stokes-fluid-t30.pdf> </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/user/figures/stokes-fluid-t40.pdf> </build/
> python-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/sto
> kes-fluid-t50.pdf
> Underfull \hbox (badness 10000) in paragraph at lines 395--399
>
>
> LaTeX Warning: Reference `fig:ex08cres' on page 63 undefined on input line 430.
>
>
> )>] [63Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc"
> pdfTeX warning (ext4): destination with the same identifier (name{figure.6
> .5}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.125 \chapter
> {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-example08c.png (PNG c
> opy)>] [64pdfTeX warning (ext4): destination with the same identifier (name{fig
> ure.6.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.125 \chapter
> {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>]
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc
> Chapter 7.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example09.tex [36 </<<PKGBUILDDIR>>/debian
> /tmp3/posix/doc/user/figures/Slip1.pdf>]
> Underfull \hbox (badness 10000) in paragraph at lines 17--21
>
> [65] [37]Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/dir
> ac.tex [38 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
> oc/user/figures/Slip2.png [66] [67] [68 </<<PKGBUILDDIR>>/debian/tmp3
> /posix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> </build/python-escr
> ipt-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-examp
> le09msh2d.png (PNG copy)> </<<PKGBUILDDIR>>/debi
> an/tmp3/posix/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>]
> [69Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc"
> pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.186 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>]/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc
>
> Underfull \hbox (badness 10000) in paragraph at lines 202--209
>
>
> Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223
> [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
> ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
> ) [70] [71 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
> oc/cookbook/figures/ex09b00201.png (PNG copy)> </<<BUILDDIR>>/py
> thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex09b00341.png (PNG cop
> y)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cook
> book/figures/ex09b00440.png (PNG copy)>] [72]
> Chapter 8.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example10.tex
>
> Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li
> ne 27.
>
>
> LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 33.
>
>
> LaTeX Warning: Reference `eqn:ex10a' on page 73 undefined on input line 42.
>
>
> LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 46.
>
> [73] [74]Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc
>
> Underfull \hbox (badness 10000) in paragraph at lines 93--97
>
>
> LaTeX Warning: Reference `fig:mayavi2openfile' on page 75 undefined on input li
> ne 132.
>
>
> LaTeX Warning: Reference `fig:mayavi2data' on page 75 undefined on input line 1
> 35.
>
>
> LaTeX Warning: Reference `fig:mayavi2cell2point' on page 75 undefined on input
> line 143.
>
>
> LaTeX Warning: Reference `fig:ex10pot' on page 75 undefined on input line 147.
>
> [75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.8.1}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.2}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/mayavi2_openfile.pngInstall file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc
> Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc
> > </<<BUILDDIR>>/p
> ython-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/mayavi2_data.pngInstall file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc
> Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc
> Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc
> le Mesh_read.cpp...
> Parsing code for file Mesh_read.cpp...
> Parsing code for file Mesh_readGmsh.cpp...
> Parsing code for file Mesh_readGmsh.cpp...
> Parsing code for file Mesh_rec4.cpp...
> Parsing code for file Mesh_rec8.cpp...
> Parsing code for file Mesh_resolveNodeIds.cpp...
> Parsing code for file Mesh_tet4.cpp...
> Parsing code for file Mesh_tri3.cpp...
> Parsing code for file Mesh_write.cpp...
> Parsing code for file Mesh_write.cpp...
> Parsing code for file MINRES.cpp...
> Parsing code for file MKL.cpp...
> Generating code for file MKL.h...
> Parsing code for file mmio.cpp...
> Generating code for file mmio.h...
> Parsing code for file MPIDataReducer.cpp...
> Generating code for file MPIDataReducer.h...
> Parsing code for file MPIScalarReducer.cpp...
> Generating code for file MPIScalarReducer.h...
> Parsing code for file MultiBrick.cpp...
> Generating code for file MultiBrick.h...
> Parsing code for file MultiRectangle.cpp...
> Generating code for file MultiRectangle.h...
> Parsing code for file NCHelper.cpp...
> Generating code for file NCHelper.h...
> Parsing code for file NewtonGMRES.cpp...
> Generating code for file NodeData.h...
> Parsing code for file NodeFile.cpp...
> Parsing code for file NodeFile.cpp...
> Generating code for file NodeFile.h...
> Generating code for file NodeFile.h...
> Parsing code for file NodeFile_createDenseLabelings.cpp...
> Parsing code for file NodeFile_createMappings.cpp...
> Parsing code for file NodeFile_createTrilinosGraph.cpp...
> Parsing code for file NodeFile_gather.cpp...
> Generating code for file NodeMapping.h...
> Generating code for file NodeMapping.h...
> Parsing code for file NonReducedVariable.cpp...
> Generating code for file NonReducedVariable.h...
> Parsing code for file NullDomain.cpp...
> Generating code for file NullDomain.h...
> Parsing code for file Options.cpp...
> Generating code for file Options.h...
> Generating code for file Paso.h...
> Generating code for file PasoException.h...
> Parsing code for file PasoUtil.cpp...
> Generating code for file PasoUtil.h...
> Parsing code for file Pattern.cpp...
> Generating code for file Pattern.h...
> Parsing code for file Pattern_mis.cpp...
> Parsing code for file Pattern_reduceBandwidth.cpp...
> Parsing code for file PCG.cpp...
> Parsing code for file performance.cpp...
> Generating code for file performance.h...
> Generating code for file Pointers.h...
> Parsing code for file Preconditioner.cpp...
> Generating code for file Preconditioner.h...
> Parsing code for file pyerr.cpp...
> Generating code for file pyerr.h...
> Parsing code for file Quadrature.cpp...
> Generating code for file Quadrature.h...
> Parsing code for file Random.cpp...
> Generating code for file Random.h...
> Parsing code for file ReactiveSolver.cpp...
> Generating code for file ReactiveSolver.h...
> Parsing code for file Rectangle.cpp...
> Parsing code for file Rectangle.cpp...
> Generating code for file Rectangle.h...
> Generating code for file Rectangle.h...
> Parsing code for file RectangleGradients.cpp...
> Parsing code for file RectangleIntegrals.cpp...
> Parsing code for file RectangleReductions.cpp...
> Parsing code for file ReferenceElements.cpp...
> Generating code for file ReferenceElements.h...
> Generating code for file ReferenceElementSets.h...
> Parsing code for file RILU.cpp...
> Generating code for file Ripley.h...
> Parsing code for file ripleycpp.cpp...
> Parsing code for file RipleyDomain.cpp...
> Parsing code for file RipleyDomain.cpp...
> Generating code for file RipleyDomain.h...
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> Parsing code for file RipleyElements.cpp...
> Generating code for file RipleyElements.h...
> Generating code for file RipleyException.h...
> Parsing code for file RipleyNodes.cpp...
> Generating code for file RipleyNodes.h...
> Generating code for file RipleySystemMatrix.h...
> Parsing code for file SchurComplement.cpp...
> Parsing code for file ScriptMPI.cpp...
> Parsing code for file ScriptMPIredirect.cpp...
> Parsing code for file ShapeFunctions.cpp...
> Generating code for file ShapeFunctions.h...
> Parsing code for file ShapeTable.cpp...
> Generating code for file ShapeTable.h...
> Generating code for file SharedComponents.h...
> Parsing code for file Smoother.cpp...
> Parsing code f>]
> [77pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.4}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/mayavi2_cell2point.pngInstall file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc
> Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc
> >]Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc
> )) [39 </<<BUILDDIR>>/python-escript-
> 5.5/debian/tmp3/posix/doc/user/figures/diracplot.pngInstall file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc
> > </<<BUILDDIR>>
> /python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG co
> py)>]Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc
>
> Underfull \hbox (badness 10000) in paragraph at lines 180--184
>
>
> LaTeX Warning: Reference `fig:ex10bpot' on page 78 undefined on input line 205.
>
>
>
> LaTeX Warning: Reference `fig:ex10bpot2' on page 78 undefined on input line 215
> .
>
>
> LaTeX Warning: Reference `fig:ex10p' on page 78 undefined on input line 218.
>
> [78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.8.5}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10bpot.png (PNG copy)> </build/python-escript-AYdzS
> v/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG
> copy)>] [80pdfTeX warning (ext4): destination with the same identifier (name{fi
> gure.8.7}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10p_boundeff.pdf>]
> Underfull \hbox (badness 10000) in paragraph at lines 275--281
>
> [81]Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc
>
>
> LaTeX Warning: Reference `fig:ex10mgeo' on page 82 undefined on input line 348.
>
>
>
> LaTeX Warning: Reference `fig:ex10mmsh' on page 82 undefined on input line 379.
>
>
> [82] [83pdfTeX warning (ext4): destination with the same identifier (name{figur
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> l.406 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.9}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.406 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10m_geo.png (PNG copy)> </build/python-escript-AYdz
> Sv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG
> copy)>]
>
> LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin
> e 427.
>
>
> LaTeX Warning: Reference `fig:ex10q boundeff zoom' on page 84 undefined on inpu
> t line 427.
>
>
> LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin
> e 443.
>
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> 0}) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.449 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10q_boundeff.pdf>]Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc"
> [85pdfTeX warning (ext4): destin
> ation with the same identifier (name{figure.8.11}) has been already used, dupli
> cate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.449 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [86]/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc
>
> Chapter 9.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
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> \OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st
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> parameter 'periodic1'
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> (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty [71])
> (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc"
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> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)/<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h:95: warning: argument 'fileName' of command @param is not found in the argument list of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize)
> /<<PKGBUILDDIR>>/dudley/src/DudleyDomain.h:103: warning: The following parameter of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize) is not documented:
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> Chapter 1.
>
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> ]
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> Chapter 4.
> [75]]
> Chapter 2.
>
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> </<<PKGBUILDDIR>>/debian/tmp
> 3/posix/doc/cookbook/figures/onedheatdiff001.pdf>] [76] [12]/<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:1380: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value)
> /<<PKGBUILDDIR>>/escriptcore/src/DataVectorOps.h:1397: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented:
> parameter 'leftShape'
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> [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able
> at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound
> ary _
> [13] [14
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> \OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in-
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> ions
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> l.313 T
> here are various ways to construct domain objects. The simplest form ...
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
> k/figures/workflow.png]Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc
> [78] [79] [80>]] [15pdfTeX warning (ext4): destination with the same id
> entifier (name{figure.2.3}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.313 T
> here are various ways to construct domain objects. The simplest form ...
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookboo
> k/figures/functionspace.pdf>] [16] [81]
> (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty
>
> LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 2' on page 82 undefined on
> input line 566.
>
> [82] [83)]Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc
> [84]
>
> LaTeX Warning: Citation `MKL' on page 85 undefined on input line 914.
>
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> LaTeX Warning: Citation `UMFPACK' on page 85 undefined on input line 919.
>
> [85]
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> LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938.
>
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>
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>
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>
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> LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1057.
>
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lum
> ping.tex [87
> Underfull \hbox (badness 10000) in paragraph at lines 415--425
>
> [17]] [88 </<<PKGBUILDDIR>>/debian/tmp3/
> posix/doc/user/figures/lumping_valet_a_1.pngInstall file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc"
> /usr/bin/python3 scripts/py_comp.py downunder/py_src/splitregularizations.py debian/tmp3/posix/downunder/splitregularizations.pyc
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:1600: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented:
> parameter 'dummy'
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:654: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented:
> parameter 'dummy'
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:611: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented:
> parameter 'dummy'
> /<<PKGBUILDDIR>>/escriptcore/src/Data.h:625: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented:
> parameter 'dummy'
> [18]
> Underfull \hbox (badness 10000) in paragraph at lines 604--605
>
>
> Underfull \hbox (badness 10000) in paragraph at lines 604--605
>
> [19]Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc"
> /usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc
> /<<PKGBUILDDIR>>/escriptcore/src/DataAbstract.h:96: warning: The following parameter of escript::DataAbstract::DataAbstract(const FunctionSpace &what, const ShapeType &shape, bool isDataEmpty=false, bool isCplx=false) is not documented:
> parameter 'isCplx'
> [20pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.2.4}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.680 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ttblockspyplot150.png>]Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc"
> [89 </build/python-escript-AYdzS
> v/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_valet_a_2.png>]
> Underfull \hbox (badness 10000) in paragraph at lines 684--692
>
>
> LaTeX Warning: Float too large for page by 10.55325pt on input line 775.
>
> [21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.2.5}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.776 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/blockspyplot001.pngInstall file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h"
> Install file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h"
> Install file: "dudley/src/DudleyDomain.h" as "debian/stage3/include/dudley/DudleyDomain.h"
> Install file: "escriptcore/src/ExceptionTranslators.h" as "debian/stage3/include/escript/ExceptionTranslators.h"
> Install file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h"
> Install file: "escriptcore/src/Data.h" as "debian/stage3/include/escript/Data.h"
> Install file: "escriptcore/src/DataTypes.h" as "debian/stage3/include/escript/DataTypes.h"
> Install file: "escriptcore/src/EsysMPI.h" as "debian/stage3/include/escript/EsysMPI.h"
> Install file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h"
> /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:419: warning: The following parameter of escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented:
> parameter 'dummy'
> Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h"
> /<<PKGBUILDDIR>>/escriptcore/src/DataTagged.h:514: warning: The following parameter of escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented:
> parameter 'dummy'
> Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h"
> Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h"
> Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h"
> Install file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h"
> Install file: "paso/src/SystemMatrixPattern.h" as "debian/stage3/include/paso/SystemMatrixPattern.h"
> Install file: "escriptcore/src/EsysException.h" as "debian/stage3/include/escript/EsysException.h"
> >
> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fig
> ures/lumping_valet_u_1.png> </<<BUILDDIR>>/py
> thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/blockspyplot050.png/<<PKGBUILDDIR>>/escriptcore/src/EsysMPI.h:93: warning: explicit link request to 'CPUs' could not be resolved
> > </
> <<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook/f
> igures/blockspyplot200.png/<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h:529: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian)
> /<<PKGBUILDDIR>>/escriptcore/src/SolverOptions.h:534: warning: The following parameter of escript::SolverBuddy::setHermitian(bool hermitian) is not documented:
> parameter 'hermitian'
> >]Util.cpp...
> Generating docs for file Util.h...
> Generating docs for file Util.h...
> Generating docs for file Utils.cpp...
> Generating docs for file Utils.h...
> Generating docs for file VisItControl.cpp...
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> Generating docs for file vtkCellType.h...
> Generating docs for file WaveAssembler2D.cpp...
> Generating docs for file WaveAssembler2D.cpp...
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> Generating docs for file weipa.h...
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> Generating docs for file WrappedArray.cpp...
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> Generating page documentation...
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> Generating docs for compound Block...
> Generating docs for compound Block2...
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> Generating docs for namespace dudley
> Generating docs for compound dudley::AssembleParameters...
> Generating docs for compound dudley::DudleyDomain...
> Generating docs for compound dudley::DudleyException...
> Generating docs for compound dudley::ElementFile...
> Generating docs for compound dudley::ElementFile_Jacobians...
> Generating docs for compound dudley::NodeFile...
> Generating docs for compound dudley::NodeMapping...
> Generating docs for namespace dudley::util
> Generating docs for namespace escript
> Generating docs for compound escript::AbsMax...
> Generating docs for compound escript::AbstractContinuousDomain...
> Generating docs for compound escript::AbstractDomain...
> Generating docs for compound escript::AbstractReducer...
> Generating docs for compound escript::AbstractSystemMatrix...
> Generating docs for compound escript::AbstractTransportProblem...
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> Generating docs for compound escript::Data...
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> Generating docs for compound escript::DataEmpty...
> Generating docs for compound escript::DataException...
> Generating docs for compound escript::DataExpanded...
> Generating docs for compound escript::DataLazy...
> Generating docs for compound escript::DataReady...
> Generating docs for compound escript::DataTagged...
> Generating docs for compound escript::Distribution...
> Generating docs for compound escript::DomainException...
> Generating docs for compound escript::EscriptParams...
> Generating docs for compound escript::EsysException...
> Generating docs for compound escript::FileWriter...
> Generating docs for compound escript::FMax...
> Generating docs for compound escript::FMin...
> Generating docs for compound escript::FunctionSpace...
> Generating docs for compound escript::FunctionSpaceException...
> Generating docs for compound escript::IndexList...
> Generating docs for compound escript::IOError...
> Generating docs for compound escript::JMPI_...
> Generating docs for compound escript::LapackInverseHelper...
> Generating docs for compound escript::MPIDataReducer...
> Generating docs for compound escript::MPIScalarReducer...
> Generating docs for compound escript::NoCOMM_WORLD...
> Generating docs for compound escript::NonReducedVariable...
> Generating docs for compound escript::NotImplementedError...
> Generating docs for compound escript::NullDomain...
> Generating docs for compound escript::SolverBuddy...
> Generating docs for compound escript::SplitWorld...
> Generating docs for compound escript::SplitWorldException...
> Generating docs for compound escript::SubWorld...
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> Generating docs for compound escript::Taipan...
> Generating docs for nested compound escript::Taipan::Taipan_MemTable. [90 </<<BUILDDIR>>/python-escript-5
> .5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_du_1.png>]
> Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798
> [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
> ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
> [][][][][][][][][][][][][][][][][][][][][][][][][]
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example02.tex
> Underfull \hbox (badness 10000) in paragraph at lines 17--19
>
> [23]> </build/python-esc
> ript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_
> du_2.png [24pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.2.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.109 \end{python}
> </<<PKGBUILDDIR>>/debian/tmp3
> /posix/doc/cookbook/figures/onedheatdiff002.pdf>]
>
> LaTeX Warning: Float too large for page by 10.55325pt on input line 146.
>
> ) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2
> .7}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.108 \chapter
> {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
> python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png/<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:144: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi)
> /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:144: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi)
> /<<PKGBUILDDIR>>/finley/src/FinleyDomain.h:159: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented:
> parameter 'L0'
> parameter 'L1'
> >]
> [26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.108 \chapter
> {Heat Diffusion in Two Dimensions} </<<BUILDDIR>>/
> python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/rodpyplot001.pngInstall file: "escriptcore/src/DataAbstract.h" as "debian/stage3/include/escript/DataAbstract.h"
> >]))Install file: "escriptcore/src/DataConstant.h" as "debian/stage3/include/escript/DataConstant.h"
> [91 </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/user/figures/lumping_SUPG_u_1.pngInstall file: "escriptcore/src/DataException.h" as "debian/stage3/include/escript/DataException.h"
> Install file: "escriptcore/src/DataExpanded.h" as "debian/stage3/include/escript/DataExpanded.h"
> Install file: "escriptcore/src/DataLazy.h" as "debian/stage3/include/escript/DataLazy.h"
> Install file: "escriptcore/src/DataReady.h" as "debian/stage3/include/escript/DataReady.h"
> Install file: "escriptcore/src/DataTagged.h" as "debian/stage3/include/escript/DataTagged.h"
> Install file: "escriptcore/src/DataVectorOps.h" as "debian/stage3/include/escript/DataVectorOps.h"
> Install file: "escriptcore/src/system_dep.h" as "debian/stage3/include/escript/system_dep.h"
> Install file: "escriptcore/src/Assert.h" as "debian/stage3/include/escript/Assert.h"
> Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h"
> Install file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h"
> Install file: "escriptcore/src/Distribution.h" as "debian/stage3/include/escript/Distribution.h"
> Install file: "paso/src/Coupler.h" as "debian/stage3/include/paso/Coupler.h"
> Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h"
> Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h"
> Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h"
> Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h"
> > </b
> uild/python-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
> gures/rodpyplot050.png> </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/user/figures/lumping_SUPG_u_1b.png> </<<PKGBUILDDIR>>/debian
> /tmp3/posix/doc/cookbook/figures/rodpyplot200.png/<<PKGBUILDDIR>>/ripley/src/Brick.h:43: warning: The following parameters of ripley::Brick::Brick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
> parameter 'points'
> parameter 'tags'
> parameter 'tagnamestonums'
> parameter 'w'
> >]
> Chapter 3.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example03.tex>]
> [92 </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user
> /figures/lumping_SUPG_u_2.pngInstall file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h"
> Install file: "escriptcore/src/Pointers.h" as "debian/stage3/include/escript/Pointers.h"
> Install file: "escriptcore/src/WrappedArray.h" as "debian/stage3/include/escript/WrappedArray.h"
> Install file: "escriptcore/src/ArrayOps.h" as "debian/stage3/include/escript/ArrayOps.h"
> Install file: "escriptcore/src/ES_optype.h" as "debian/stage3/include/escript/ES_optype.h"
> Install file: "escriptcore/src/LapackInverseHelper.h" as "debian/stage3/include/escript/LapackInverseHelper.h"
> Install file: "paso/src/Paso.h" as "debian/stage3/include/paso/Paso.h"
> Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h"
>
> Underfull \hbox (badness 10000) in paragraph at lines 22--23
>
>
> Underfull \hbox (badness 10000) in paragraph at lines 22--23
>
> [27Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h"
> ]Install file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h"
> Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h"
> Install file: "escriptcore/src/IndexList.h" as "debian/stage3/include/escript/IndexList.h"
> [28pdfTeX warning (ext4): destination with the same identifier (name{figur
> e.3.1}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.141 \begin{python}
> </<<PKGBUILDDIR>>/debian/tm
> p3/posix/doc/cookbook/figures/twodheatdiff.pdf>]/<<PKGBUILDDIR>>/ripley/src/MultiBrick.h:43: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented:
> parameter 'points'
> parameter 'tags'
> parameter 'tagnamestonums'
> parameter 'w'
> parameter 'subdivisions'
> Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h"
> Install file: "escriptcore/src/DataVectorTaipan.h" as "debian/stage3/include/escript/DataVectorTaipan.h"
> Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h"
>
>
> LaTeX Warning: Float too large for page by 12.55325pt on input line 232.
>
> [29]/<<PKGBUILDDIR>>/ripley/src/MultiRectangle.h:43: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented:
> parameter 'points'
> parameter 'tags'
> parameter 'tagnamestonums'
> parameter 'w'
> parameter 'subdivisions'
> (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)
> Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287
> [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
>
>
> Underfull \hbox (badness 10000) in paragraph at lines 306--311
>
> [30]/<<PKGBUILDDIR>>/ripley/src/Rectangle.h:43: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented:
> parameter 'points'
> parameter 'tags'
> parameter 'tagnamestonums'
> parameter 'w'
> ) [31] [32pdfTeX warning (ext4): destination with the same identifier (name
> {figure.3.2}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.112 \chapter
> {Complex Geometries} </<<BUILDDIR>>/python-escript
> -5.5/debian/tmp3/posix/doc/cookbook/figures/heatrefraction001.png>]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/pyc
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> [133] [134 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
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> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/spe
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> Chapter 9.
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> -escript-5.5/debian/tmp3/posix/doc/user/figures/speckley6.png (PNG copy)> </bui
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> >])
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> Appendix C.
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> ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10
> and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 .
> [67] [68] [69] [70] [71] [72] [73]) [74]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/lin
> earPDE.tex
> Chapter 4.
> [75] [76]
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> ions
> [77] [78] [79] [80>]])
> Chapter 5.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
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> {Seismic Wave Propagation} </<<BUILDDIR>>/python-e
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> uild/python-escript-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/fi
> gures/ex07jsamp.png (PNG copy)> </<<BUILDDIR>>/python-escript-5.
> 5/debian/tmp3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]
> Chapter 6.
>
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> Chapter 7.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
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>
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> Chapter 9.
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> [117]>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/user/fau
> ltsystem.tex [118 </<<PKGBUILDDIR>>/debian/tmp3/
> posix/doc/user/figures/FaultSystem2D.pdf>] [119]
> Output written on cookbook.pdf (89 pages, 4391310 bytes).
> Transcript written on cookbook.log.
> [120]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex
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> and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 .
> [67] [68] [69] [70] [71] [72] [73]) [74]
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> Chapter 6.
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> l.125 \chapter
> {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-example08c.png (PNG c
> opy)>]> [64<pdfTeX warning (ext4): destination with the same identifier (name{fig
> ure.6.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.125 \chapter
> {3D Seismic Wave Propagation} </<<BUILDDIR>>/pytho
> n-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)/usr/share/texlive
> /texmf-dist/fonts/type1/urw/times/utmri8a.pfb>]
> Chapter 7.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example09.tex>
> Output written on user.pdf (184 pages, 2641516 bytes).
> Transcript written on user.log.
>
> Underfull \hbox (badness 10000) in paragraph at lines 17--21
>
> [65]reached max number of retries on Latex , 4
> Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf"
> [66] [67] [68 </<<PKGBUILDDIR>>/debian/tmp3
> /posix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> </build/python-escr
> ipt-AYdzSv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/gmsh-examp
> le09msh2d.png (PNG copy)> </<<PKGBUILDDIR>>/debi
> an/tmp3/posix/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>]
> [69pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1
> }) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.186 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_CopyNodalData.cpp
>
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> [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][
> ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][]
> ) [70] [71 </<<PKGBUILDDIR>>/debian/tmp3/posix/d
> oc/cookbook/figures/ex09b00201.png (PNG copy)> </<<BUILDDIR>>/py
> thon-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex09b00341.png (PNG cop
> y)> </<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cook
> book/figures/ex09b00440.png (PNG copy)>] [72]
> Chapter 8.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example10.tex [73] [74]
> Underfull \hbox (badness 10000) in paragraph at lines 93--97
>
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> e.8.1}) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.2}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/mayavi2_openfile.png> </<<BUILDDIR>>/p
> ython-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/mayavi2_data.png>]
> [77pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3
> }) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.4}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.177 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/mayavi2_cell2point.png> </<<BUILDDIR>>
> /python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG co
> py)>]
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>
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> e.8.5}) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.6}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10bpot.png (PNG copy)> </build/python-escript-AYdzS
> v/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG
> copy)>] [80pdfTeX warning (ext4): destination with the same identifier (name{fi
> gure.8.7}) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.246 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10p_boundeff.pdf>]
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>
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.406 \clearpage
> pdfTeX warning (ext4): destination with the same identifier (na
> me{figure.8.9}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.406 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10m_geo.png (PNG copy)> </build/python-escript-AYdz
> Sv/python-escript-5.5/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG
> copy)>] [84pdfTeX warning (ext4): destination with the same identifier (name{f
> igure.8.10}) has been already used, duplicate ignored
>
> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.449 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10q_boundeff.pdf>] [85pdfTeX warning (ext4): destin
> ation with the same identifier (name{figure.8.11}) has been already used, dupli
> cate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.449 \clearpage
> </<<PKGBUILDDIR>>/debian/tmp3/p
> osix/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [86]
> Chapter 9.
>
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /example11.tex
> Underfull \hbox (badness 10000) in paragraph at lines 61--62
>
>
> Underfull \hbox (badness 10000) in paragraph at lines 61--62
>
> )
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /cookbook.bbl [87] [88pdfTeX warning (ext4): destination with the same identifi
> er (name{figure.9.1}) has been already used, duplicate ignored
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> \AtBegShi at Output ...ipout \box \AtBeginShipoutBox
> \fi \fi
> l.1 \begin{thebibliography}{5}
> </<<PKGBUILDDIR>>
> /debian/tmp3/posix/doc/cookbook/figures/ex11cstreamline.png (PNG copy)>])
> [89]
> (/<<PKGBUILDDIR>>/debian/tmp3/posix/doc/cookbook
> /cookbook.aux)
>
> Package rerunfilecheck Warning: File `cookbook.out' has changed.
> (rerunfilecheck) Rerun to get outlines right
> (rerunfilecheck) or use package `bookmark'.
>
>
> LaTeX Warning: There were multiply-defined labels.
>
> )
> (see the transcript file for additional information)pdfTeX warning (dest): name
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> {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}</usr/share/texlive/
> texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-
> dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/f
> onts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-dist/fonts/ty
> pe1/public/amsfonts/cm/cmmi6.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
> lic/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
> fonts/cm/cmmi8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
> m/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr5.
> pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb></us
> r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/
> texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/
> texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-
> dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
> nts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/typ
> e1/public/amsfonts/cm/cmsy8.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
> ic/amsfonts/symbols/msam10.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/c
> ourier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a
> .pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr/s
> hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive
> /texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb></usr/share/texlive/texmf-dist
> /fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/ur
> w/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a
> .pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
> Output written on cookbook.pdf (89 pages, 4391817 bytes).
> Transcript written on cookbook.log.
> Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf"
> g++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_LumpedSystem.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_NodeCoordinates.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Points.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Single_2D.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_Single_3D.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_System_2D.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_PDE_System_3D.cpp
> Install file: "paso/src/SystemMatrix.h" as "debian/stage3/include/paso/SystemMatrix.h"
> Install file: "paso/src/SparseMatrix.h" as "debian/stage3/include/paso/SparseMatrix.h"
> g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_addToSystemMatrix.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getAssembleParameters.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getNormal.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_getSize.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_integrate.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_interpolate.cpp
> Install file: "escriptcore/src/NCHelper.h" as "debian/stage3/include/escript/NCHelper.h"
> Install file: "escriptcore/src/SubWorld.h" as "debian/stage3/include/escript/SubWorld.h"
> Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h"
> g++ -o debian/tmp3/posix/dudley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/DomainFactory.cpp
> Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h"
> Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h"
> Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h"
> Install file: "escriptcore/src/Random.h" as "debian/stage3/include/escript/Random.h"
> Install file: "escriptcore/src/SolverOptions.h" as "debian/stage3/include/escript/SolverOptions.h"
> Install file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h"
> Install file: "paso/src/Options.h" as "debian/stage3/include/paso/Options.h"
> g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/DudleyDomain.cpp
> g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile.cpp
> g++ -o debian/tmp3/posix/dudley/src/ElementFile_createColoring.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_createColoring.cpp
> g++ -o debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_distributeByRankOfDOF.cpp
> g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ElementFile_jacobians.cpp
> g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/IndexList.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_distributeByRankOfDOF.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_getPattern.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_optimizeDOFDistribution.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_optimizeDOFLabeling.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_read.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_readGmsh.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_resolveNodeIds.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_tet4.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_tri3.cpp
> g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Mesh_write.cpp
> g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile.cpp
> g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createDenseLabelings.cpp
> g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createMappings.cpp
> g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_createTrilinosGraph.cpp
> g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/NodeFile_gather.cpp
> g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/ShapeTable.cpp
> g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Util.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_gradient.cpp
> g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include dudley/src/Assemble_jacobians.cpp
> g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/BiCGStab.cpp
> g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Coupler.cpp
> g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/FCT_Solver.cpp
> g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/FluxLimiter.cpp
> g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Functions.cpp
> g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/GMRES.cpp
> g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/GMRES2.cpp
> g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/MKL.cpp
> g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/NewtonGMRES.cpp
> g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Options.cpp
> g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/PCG.cpp
> g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/PasoUtil.cpp
> g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern.cpp
> g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern_mis.cpp
> g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Pattern_reduceBandwidth.cpp
> g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Preconditioner.cpp
> g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/ReactiveSolver.cpp
> g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SchurComplement.cpp
> g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Smoother.cpp
> g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Solver.cpp
> g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Solver_Function.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_getSubmatrix.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_nullifyRowsAndCols.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_saveHB.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixMatrix.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixMatrixTranspose.cpp
> g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SparseMatrix_MatrixVector.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_MatrixVector.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_debug.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_debug.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_extendedRows.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_loadMM.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrix_mergeMainAndCouple.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrixPattern.cpp
> g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/SystemMatrixPattern_unrollBlocks.cpp
> g++ -o debian/tmp3/posix/paso/src/Transport.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Transport.cpp
> g++ -o debian/tmp3/posix/paso/src/Transport_solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/Transport_solve.cpp
> g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/ILU.cpp
> g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/MINRES.cpp
> g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/RILU.cpp
> g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/TFQMR.cpp
> g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/UMFPACK.cpp
> g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/mmio.cpp
> g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/performance.cpp
> g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include paso/src/solve.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractContinuousDomain.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractDomain.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractReducer.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractSystemMatrix.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/AbstractTransportProblem.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ArrayOps.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/BinaryDataReadyOps.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Data.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataAbstract.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataConstant.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataEmpty.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataExpanded.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataFactory.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataLazy.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataReady.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataTagged.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataTypes.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVector.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorAlt.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorOps.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/DataVectorTaipan.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/EscriptParams.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/EsysMPI.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ES_optype.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/ExceptionTranslators.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/FunctionSpace.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/FunctionSpaceFactory.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/LapackInverseHelper.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/MPIDataReducer.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/MPIScalarReducer.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NCHelper.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NonReducedVariable.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/NullDomain.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/pyerr.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Random.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SolverOptions.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SplitWorld.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/SubWorld.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Taipan.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/TestDomain.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/Utils.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/WrappedArray.cpp
> /usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc
> Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc"
> /usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc
> Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc
> Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc
> Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc
> Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc
> Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc
> Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc
> Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc
> Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc
> Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc
> Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc"
> /usr/bin/python3 scripts/py_comp.py escript/py_src/util.py debian/tmp3/posix/escript/util.pyc
> Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/benchmark.py debian/tmp3/posix/escriptcore/py/benchmark.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/datamanager.py debian/tmp3/posix/escriptcore/py/datamanager.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc"
> g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include escriptcore/src/escriptcpp.cpp
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/nonlinearPDE.py debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/functions.py debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc"
> /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/util.py debian/tmp3/posix/escriptcore/py/util.pyc
> Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc"
> /usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc
> Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py finley/py_src/factorywrappers.py debian/tmp3/posix/finley/py/factorywrappers.pyc
> Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc"
> Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h"
> Install file: "finley/src/Finley.h" as "debian/stage3/include/finley/Finley.h"
> Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h"
> Install file: "finley/src/FinleyException.h" as "debian/stage3/include/finley/FinleyException.h"
> Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h"
> Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h"
> Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h"
> Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h"
> Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h"
> Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h"
> Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h"
> Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h"
> g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/finleycpp.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_AverageElementData.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so"
> g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so"
> g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so"
> g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so"
> g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_CopyElementData.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_CopyNodalData.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_LumpedSystem.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_NodeCoordinates.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Points.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_1D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_2D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_3D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_Single_C.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_1D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_2D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_3D.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_PDE_System_C.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_addToSystemMatrix.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getAssembleParameters.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getNormal.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_getSize.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_gradient.cpp
> Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h"
> g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_integrate.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_interpolate.cpp
> g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Assemble_jacobians.cpp
> g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/DomainFactory.cpp
> g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ElementFile.cpp
> g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ElementFile_jacobians.cpp
> g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lescript -lpython3.8 -lboost_python39
> g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/FinleyDomain.cpp
> Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so"
> g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/IndexList.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_addPoints.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_findMatchingFaces.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_getPasoPattern.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_getTrilinosGraph.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_glueFaces.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_hex20.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_hex8.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_joinFaces.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_merge.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_merge.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_optimizeDOFDistribution.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_read.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_readGmsh.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_rec4.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_rec8.cpp
> g++ -o debian/tmp3/posix/finley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Mesh_write.cpp
> g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/NodeFile.cpp
> g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Quadrature.cpp
> g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ReferenceElements.cpp
> g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/ShapeFunctions.cpp
> g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include finley/src/Util.cpp
> /usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc
> Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc
> Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/flow.py debian/tmp3/posix/modellib/flow.pyc
> Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/geometry.py debian/tmp3/posix/modellib/geometry.pyc
> Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/input.py debian/tmp3/posix/modellib/input.pyc
> Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc
> Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc
> Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc
> Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc
> Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc"
> /usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc
> Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc
> Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc
> Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc
> Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc
> Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc
> Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc
> Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc
> Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc"
> /usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc
> Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc"
> /usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc
> Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc"
> /usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc
> Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc"
> Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h"
> Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h"
> Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h"
> Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h"
> Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h"
> Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h"
> Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h"
> Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h"
> Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h"
> Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h"
> g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/ripleycpp.cpp
> g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/blocktools.cpp
> g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/blocktools2.cpp
> Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h"
> Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h"
> Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h"
> Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h"
> Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h"
> g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/Brick.cpp
> g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lpython3.8 -lboost_python39
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/domainhelpers.h:20,
> from debian/stage3/include/ripley/AbstractAssembler.h:24,
> from ripley/src/ripleycpp.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h"
> g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/DefaultAssembler2D.cpp
> Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so"
> g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so"
> g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/DefaultAssembler3D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Brick.h:21,
> from ripley/src/Brick.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Rectangle.h:21,
> from debian/stage3/include/ripley/DefaultAssembler2D.h:20,
> from ripley/src/DefaultAssembler2D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Brick.h:21,
> from debian/stage3/include/ripley/DefaultAssembler3D.h:20,
> from ripley/src/DefaultAssembler3D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/domainhelpers.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/domainhelpers.h:20,
> from ripley/src/domainhelpers.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h"
> g++ -o debian/tmp3/posix/ripley/src/LameAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/LameAssembler2D.cpp
> g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/LameAssembler3D.cpp
> g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/MultiBrick.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Rectangle.h:21,
> from debian/stage3/include/ripley/LameAssembler2D.h:20,
> from ripley/src/LameAssembler2D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Brick.h:21,
> from debian/stage3/include/ripley/LameAssembler3D.h:20,
> from ripley/src/LameAssembler3D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Brick.h:21,
> from debian/stage3/include/ripley/MultiBrick.h:21,
> from ripley/src/MultiBrick.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/MultiRectangle.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Rectangle.h:21,
> from debian/stage3/include/ripley/MultiRectangle.h:21,
> from ripley/src/MultiRectangle.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h"
> g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/Rectangle.cpp
> g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/RipleyDomain.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Rectangle.h:21,
> from ripley/src/Rectangle.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from ripley/src/RipleyDomain.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/ripley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/WaveAssembler2D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Rectangle.h:21,
> from debian/stage3/include/ripley/WaveAssembler2D.h:20,
> from ripley/src/WaveAssembler2D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include ripley/src/WaveAssembler3D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from debian/stage3/include/ripley/Brick.h:21,
> from debian/stage3/include/ripley/WaveAssembler3D.h:20,
> from ripley/src/WaveAssembler3D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> /usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc
> Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc"
> Install file: "speckley/src/AbstractAssembler.h" as "debian/stage3/include/speckley/AbstractAssembler.h"
> Install file: "speckley/src/Brick.h" as "debian/stage3/include/speckley/Brick.h"
> Install file: "speckley/src/Rectangle.h" as "debian/stage3/include/speckley/Rectangle.h"
> Install file: "speckley/src/domainhelpers.h" as "debian/stage3/include/speckley/domainhelpers.h"
> Install file: "speckley/src/SpeckleyDomain.h" as "debian/stage3/include/speckley/SpeckleyDomain.h"
> Install file: "speckley/src/Speckley.h" as "debian/stage3/include/speckley/Speckley.h"
> Install file: "speckley/src/SpeckleyException.h" as "debian/stage3/include/speckley/SpeckleyException.h"
> Install file: "speckley/src/system_dep.h" as "debian/stage3/include/speckley/system_dep.h"
> g++ -o debian/tmp3/posix/speckley/src/speckleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/speckleycpp.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/domainhelpers.h:20,
> from debian/stage3/include/speckley/AbstractAssembler.h:21,
> from speckley/src/speckleycpp.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/AbstractAssembler.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/domainhelpers.h:20,
> from debian/stage3/include/speckley/AbstractAssembler.h:21,
> from speckley/src/AbstractAssembler.cpp:17:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h"
> Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h"
> Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h"
> g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/Brick.cpp
> g++ -o debian/tmp3/posix/speckley/src/BrickGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickGradients.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Brick.h:21,
> from speckley/src/Brick.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Brick.h:21,
> from speckley/src/BrickGradients.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickIntegrals.cpp
> g++ -o debian/tmp3/posix/speckley/src/BrickReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/BrickReductions.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Brick.h:21,
> from speckley/src/BrickIntegrals.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Brick.h:21,
> from speckley/src/BrickReductions.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h"
> g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/DefaultAssembler2D.cpp
> g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/DefaultAssembler3D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from debian/stage3/include/speckley/DefaultAssembler2D.h:20,
> from speckley/src/DefaultAssembler2D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/domainhelpers.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/DefaultAssembler3D.h:20,
> from speckley/src/DefaultAssembler3D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/domainhelpers.h:20,
> from speckley/src/domainhelpers.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h"
> g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/Rectangle.cpp
> g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleGradients.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from speckley/src/Rectangle.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleIntegrals.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from speckley/src/RectangleGradients.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from speckley/src/RectangleIntegrals.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/RectangleReductions.cpp
> g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/SpeckleyDomain.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from speckley/src/RectangleReductions.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/WaveAssembler2D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from speckley/src/SpeckleyDomain.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Rectangle.h:21,
> from debian/stage3/include/speckley/WaveAssembler2D.h:20,
> from speckley/src/WaveAssembler2D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/WaveAssembler3D.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/WaveAssembler3D.h:20,
> from speckley/src/WaveAssembler3D.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h"
> g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include speckley/src/CrossDomainCoupler.cpp
> Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h"
> Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h"
> Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h"
> Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h"
> Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h"
> Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h"
> Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h"
> Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h"
> Install file: "weipa/src/weipa.h" as "debian/stage3/include/weipa/weipa.h"
> Install file: "weipa/src/FinleyDomain.h" as "debian/stage3/include/weipa/FinleyDomain.h"
> Install file: "weipa/src/FinleyElements.h" as "debian/stage3/include/weipa/FinleyElements.h"
> Install file: "weipa/src/FinleyNodes.h" as "debian/stage3/include/weipa/FinleyNodes.h"
> Install file: "weipa/src/RipleyDomain.h" as "debian/stage3/include/weipa/RipleyDomain.h"
> Install file: "weipa/src/RipleyElements.h" as "debian/stage3/include/weipa/RipleyElements.h"
> Install file: "weipa/src/RipleyNodes.h" as "debian/stage3/include/weipa/RipleyNodes.h"
> Install file: "weipa/src/SpeckleyDomain.h" as "debian/stage3/include/weipa/SpeckleyDomain.h"
> Install file: "weipa/src/SpeckleyElements.h" as "debian/stage3/include/weipa/SpeckleyElements.h"
> Install file: "weipa/src/SpeckleyNodes.h" as "debian/stage3/include/weipa/SpeckleyNodes.h"
> g++ -o debian/tmp3/posix/weipa/src/DataVar.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/DataVar.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from debian/stage3/include/speckley/Brick.h:21,
> from debian/stage3/include/speckley/CrossDomainCoupler.h:21,
> from speckley/src/CrossDomainCoupler.cpp:18:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/EscriptDataset.cpp
> g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyDomain.cpp
> g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyElements.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from weipa/src/EscriptDataset.cpp:43:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/FinleyNodes.cpp
> g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyDomain.cpp
> g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyElements.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from weipa/src/RipleyDomain.cpp:23:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/RipleyNodes.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from weipa/src/RipleyElements.cpp:22:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyDomain.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/ripley/system_dep.h:38,
> from debian/stage3/include/ripley/Ripley.h:26,
> from debian/stage3/include/ripley/RipleyDomain.h:21,
> from weipa/src/RipleyNodes.cpp:21:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyElements.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from weipa/src/SpeckleyDomain.cpp:23:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/SpeckleyNodes.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from weipa/src/SpeckleyElements.cpp:22:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/VisItControl.cpp
> In file included from /usr/include/boost/detail/endian.hpp:9,
> from debian/stage3/include/speckley/system_dep.h:39,
> from debian/stage3/include/speckley/Speckley.h:26,
> from debian/stage3/include/speckley/SpeckleyDomain.h:21,
> from weipa/src/SpeckleyNodes.cpp:21:
> /usr/include/boost/predef/detail/endian_compat.h:11:161: note: '#pragma message: The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead'
> 11 | #pragma message("The use of BOOST_*_ENDIAN and BOOST_BYTE_ORDER is deprecated. Please include <boost/predef/other/endian.h> and use BOOST_ENDIAN_*_BYTE instead")
> | ^
> g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-stringop-truncation --param=max-vartrack-size=100000000 -isystem /usr/include/python3.8 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include weipa/src/weipacpp.cpp
> g++ -o debian/tmp3/posix/ripley/src/libripley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/blocktools.os debian/tmp3/posix/ripley/src/blocktools2.os debian/tmp3/posix/ripley/src/Brick.os debian/tmp3/posix/ripley/src/DefaultAssembler2D.os debian/tmp3/posix/ripley/src/DefaultAssembler3D.os debian/tmp3/posix/ripley/src/domainhelpers.os debian/tmp3/posix/ripley/src/LameAssembler2D.os debian/tmp3/posix/ripley/src/LameAssembler3D.os debian/tmp3/posix/ripley/src/MultiBrick.os debian/tmp3/posix/ripley/src/MultiRectangle.os debian/tmp3/posix/ripley/src/Rectangle.os debian/tmp3/posix/ripley/src/RipleyDomain.os debian/tmp3/posix/ripley/src/WaveAssembler2D.os debian/tmp3/posix/ripley/src/WaveAssembler3D.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/ripley/src/libripley.so" as "debian/stage3/lib/libripley.so"
> g++ -o debian/tmp3/posix/speckley/src/libspeckley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/AbstractAssembler.os debian/tmp3/posix/speckley/src/Brick.os debian/tmp3/posix/speckley/src/BrickGradients.os debian/tmp3/posix/speckley/src/BrickIntegrals.os debian/tmp3/posix/speckley/src/BrickReductions.os debian/tmp3/posix/speckley/src/DefaultAssembler2D.os debian/tmp3/posix/speckley/src/DefaultAssembler3D.os debian/tmp3/posix/speckley/src/domainhelpers.os debian/tmp3/posix/speckley/src/Rectangle.os debian/tmp3/posix/speckley/src/RectangleGradients.os debian/tmp3/posix/speckley/src/RectangleIntegrals.os debian/tmp3/posix/speckley/src/RectangleReductions.os debian/tmp3/posix/speckley/src/SpeckleyDomain.os debian/tmp3/posix/speckley/src/WaveAssembler2D.os debian/tmp3/posix/speckley/src/WaveAssembler3D.os debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> g++ -o debian/tmp3/posix/ripley/src/ripleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/ripleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/ripley/src/ripleycpp.so" as "debian/stage3/esys/ripley/ripleycpp.so"
> Install file: "debian/tmp3/posix/speckley/src/libspeckley.so" as "debian/stage3/lib/libspeckley.so"
> g++ -o debian/tmp3/posix/weipa/src/libweipa.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/weipa/src/DataVar.os debian/tmp3/posix/weipa/src/EscriptDataset.os debian/tmp3/posix/weipa/src/FinleyDomain.os debian/tmp3/posix/weipa/src/FinleyElements.os debian/tmp3/posix/weipa/src/FinleyNodes.os debian/tmp3/posix/weipa/src/RipleyDomain.os debian/tmp3/posix/weipa/src/RipleyElements.os debian/tmp3/posix/weipa/src/RipleyNodes.os debian/tmp3/posix/weipa/src/SpeckleyDomain.os debian/tmp3/posix/weipa/src/SpeckleyElements.os debian/tmp3/posix/weipa/src/SpeckleyNodes.os debian/tmp3/posix/weipa/src/VisItControl.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -ldudley -lfinley -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> g++ -o debian/tmp3/posix/speckley/src/speckleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/speckleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/speckley/src/speckleycpp.so" as "debian/stage3/esys/speckley/speckleycpp.so"
> Install file: "debian/tmp3/posix/weipa/src/libweipa.so" as "debian/stage3/lib/libweipa.so"
> g++ -o debian/tmp3/posix/weipa/src/weipacpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/weipa/src/weipacpp.os -Ldebian/stage3/lib -L/usr/lib/python3.8/config-3.8-x86_64-linux-gnu -L/usr/lib -lweipa -ldudley -lfinley -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lsiloh5 -lpython3.8 -lboost_python39
> Install file: "debian/tmp3/posix/weipa/src/weipacpp.so" as "debian/stage3/esys/weipa/weipacpp.so"
> /usr/bin/python3 scripts/py_comp.py weipa/py_src/__init__.py debian/tmp3/posix/weipa/py/__init__.pyc
> Install file: "debian/tmp3/posix/weipa/py/__init__.pyc" as "debian/stage3/esys/weipa/__init__.pyc"
> /usr/bin/python3 doc/sphinx_api/genrst.py /<<PKGBUILDDIR>>/debian/stage3 esys /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int && sphinx-build -v -E --color -b html -d /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int/tree -c doc/sphinx_api -D mathjax_path=file:///usr/share/javascript/mathjax/MathJax.js /<<PKGBUILDDIR>>/debian/tmp3/sphinx_int /<<PKGBUILDDIR>>/debian/stage3/release/doc/sphinx_api
> Beginning /<<PKGBUILDDIR>>/debian/stage3/esys
> esys
> Package is empty
> -------------esys
> Beginning /<<PKGBUILDDIR>>/debian/stage3/esys/modellib
> esys.modellib
> Starting dump on esys.modellib with ignore at []
> __builtins__
> __cached__
> __doc__
> __file__
> __loader__
> __name__
> __package__
> __path__
> __spec__
> division
> print_function
> -------------esys.modellib
> ..esys.modellib.mechanics.pyc
> ..esys.modellib.mechanics
> esys.modellib.mechanics
> Import error for esys.modellib.mechanics /usr/lib/x86_64-linux-gnu/libboost_python39.so.1.71.0: undefined symbol: _Py_NewReference
> scons: *** [debian/tmp3/posix/doc/sphinx_api/stuff] Error 1
> scons: building terminated because of errors.
>
> *** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***
> Escript revision 6948
>
> Install prefix: /<<PKGBUILDDIR>>/debian/stage3
> Python: /usr/bin/python3 (Version 3.8.6)
> boost: /usr (Version 1.71.0)
> boost numpy: NO
> trilinos: NO
> numpy: YES (with headers)
> gmsh: YES
> Solver library: paso
> Direct solver: NONE
> domains: dudley, finley, ripley, speckley
> netcdf: YES (4 + 3)
> weipa: YES
> openmp: YES
> gdal: YES
> pyproj: YES
> scipy: YES
> silo: YES
>
> DISABLED features: cppunit debug gzip lapack mkl mpi parmetis sympy trilinos umfpack visit
> NOT treating warnings as errors
>
> WARNING: escript does not support sympy version 1.2 and higher. Found version 1.6
>
> ERROR: build stopped due to errors
>
> make[1]: *** [debian/rules:66: override_dh_auto_build] Error 2
The full build log is available from:
http://qa-logs.debian.net/2020/10/27/python-escript_5.5-5_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
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