Bug#1042633: statsmodels: FTBFS with Sphinx 7.1, docutils 0.20: TypeError: not all arguments converted during string formatting
Lucas Nussbaum
lucas at debian.org
Sun Jul 30 19:26:56 BST 2023
Source: statsmodels
Version: 0.13.5+dfsg-7
Severity: important
Tags: ftbfs
User: python-modules-team at lists.alioth.debian.org
Usertags: sphinx7.1
Hi,
statsmodels fails to build with Sphinx 7.1 and docutils 0.20, both of which
are currently available in experimental.
Relevant part (hopefully):
> make[2]: Entering directory '/<<PKGBUILDDIR>>/docs'
> Make static directory for images
> mkdir -p build/html/_static
> # generate the examples rst files
> Generating datasets from installed statsmodels.datasets
> ../tools/dataset_rst.py
> Writing anes96.rst.
> Writing cancer.rst.
> Writing ccard.rst.
> Writing china_smoking.rst.
> Writing co2.rst.
> Writing committee.rst.
> Writing copper.rst.
> Writing cpunish.rst.
> Writing danish_data.rst.
> Writing elnino.rst.
> Writing engel.rst.
> Writing fair.rst.
> Writing fertility.rst.
> Writing grunfeld.rst.
> Writing heart.rst.
> Writing interest_inflation.rst.
> Writing longley.rst.
> Writing macrodata.rst.
> Writing modechoice.rst.
> Writing nile.rst.
> Writing randhie.rst.
> Writing scotland.rst.
> Writing spector.rst.
> Writing stackloss.rst.
> Writing star98.rst.
> Writing statecrime.rst.
> Writing strikes.rst.
> Writing sunspots.rst.
> Executing notebooks from examples/notebooks folder
> mkdir -p build/source/examples/notebooks/generated
> # Black list notebooks from doc build here
> ../tools/nbgenerate.py --parallel --report-errors --skip-existing --execute-only --execution-blacklist statespace_custom_models
> Executing /<<PKGBUILDDIR>>/examples/notebooks/mixed_lm_example.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/mixed_lm_example.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_faq.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_faq.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/gls.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gls.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/tsa_dates.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_dates.ipynbExecuting /<<PKGBUILDDIR>>/examples/notebooks/statespace_arma_0.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_arma_0.ipynb
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/interactions_anova.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/interactions_anova.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/metaanalysis1.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/metaanalysis1.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_tvpvar_mcmc_cfa.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_tvpvar_mcmc_cfa.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 2 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 1.91760D+00 |proj g|= 3.68860D-06
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 2 0 1 0 0 0 3.689D-06 1.918D+00
> F = 1.9175996129577773
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 1.41373D+00 |proj g|= 9.51828D-04
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 2 5 1 0 0 4.516D-05 1.414D+00
> F = 1.4137311050015484
>
> CONVERGENCE: REL_REDUCTION_OF_F_<=_FACTR*EPSMCH
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 2 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.40814D+00 |proj g|= 1.27979D-01
>
> At iterate 5 f= 2.24982D+00 |proj g|= 9.50562D-04
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 2 7 9 1 0 0 2.952D-07 2.250D+00
> F = 2.2498167187366036
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> Executing /<<PKGBUILDDIR>>/examples/notebooks/pca_fertility_factors.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/pca_fertility_factors.ipynb
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 1.41373D+00 |proj g|= 1.06920D-04
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 1 4 1 0 0 4.752D-05 1.414D+00
> F = 1.4137311099487531
>
> CONVERGENCE: REL_REDUCTION_OF_F_<=_FACTR*EPSMCH
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 4 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 1.42683D+00 |proj g|= 2.05943D-01
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/markov_regression.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/markov_regression.ipynb
>
> At iterate 5 f= 1.41332D+00 |proj g|= 1.60874D-03
>
> At iterate 10 f= 1.41329D+00 |proj g|= 3.11658D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 4 11 15 1 0 0 1.796D-06 1.413D+00
> F = 1.4132928400115972
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/interactions_anova.ipynb
> An error occurred while executing the following cell:
> ------------------
> from urllib.request import urlopen
> import numpy as np
>
> np.set_printoptions(precision=4, suppress=True)
>
> import pandas as pd
>
> pd.set_option("display.width", 100)
> import matplotlib.pyplot as plt
> from statsmodels.formula.api import ols
> from statsmodels.graphics.api import interaction_plot, abline_plot
> from statsmodels.stats.anova import anova_lm
>
> try:
> salary_table = pd.read_csv("salary.table")
> except: # recent pandas can read URL without urlopen
> url = "http://stats191.stanford.edu/data/salary.table"
> fh = urlopen(url)
> salary_table = pd.read_table(fh)
> salary_table.to_csv("salary.table")
>
> E = salary_table.E
> M = salary_table.M
> X = salary_table.X
> S = salary_table.S
> ------------------
>
>
> ---------------------------------------------------------------------------
> FileNotFoundError Traceback (most recent call last)
> Cell In[2], line 15
> 14 try:
> ---> 15 salary_table = pd.read_csv("salary.table")
> 16 except: # recent pandas can read URL without urlopen
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:211, in deprecate_kwarg.<locals>._deprecate_kwarg.<locals>.wrapper(*args, **kwargs)
> 210 kwargs[new_arg_name] = new_arg_value
> --> 211 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:950, in read_csv(filepath_or_buffer, sep, delimiter, header, names, index_col, usecols, squeeze, prefix, mangle_dupe_cols, dtype, engine, converters, true_values, false_values, skipinitialspace, skiprows, skipfooter, nrows, na_values, keep_default_na, na_filter, verbose, skip_blank_lines, parse_dates, infer_datetime_format, keep_date_col, date_parser, dayfirst, cache_dates, iterator, chunksize, compression, thousands, decimal, lineterminator, quotechar, quoting, doublequote, escapechar, comment, encoding, encoding_errors, dialect, error_bad_lines, warn_bad_lines, on_bad_lines, delim_whitespace, low_memory, memory_map, float_precision, storage_options)
> 948 kwds.update(kwds_defaults)
> --> 950 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:856, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 854 if ioargs.encoding and "b" not in ioargs.mode:
> 855 # Encoding
> --> 856 handle = open(
> 857 handle,
> 858 ioargs.mode,
> 859 encoding=ioargs.encoding,
> 860 errors=errors,
> 861 newline="",
> 862 )
> 863 else:
> 864 # Binary mode
>
> FileNotFoundError: [Errno 2] No such file or directory: 'salary.table'
>
> During handling of the above exception, another exception occurred:
>
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 18
> 16 except: # recent pandas can read URL without urlopen
> 17 url = "http://stats191.stanford.edu/data/salary.table"
> ---> 18 fh = urlopen(url)
> 19 salary_table = pd.read_table(fh)
> 20 salary_table.to_csv("salary.table")
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1377, in HTTPHandler.http_open(self, req)
> 1376 def http_open(self, req):
> -> 1377 return self.do_open(http.client.HTTPConnection, req)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> An error occurred while executing the following cell:
> ------------------
> from urllib.request import urlopen
> import numpy as np
>
> np.set_printoptions(precision=4, suppress=True)
>
> import pandas as pd
>
> pd.set_option("display.width", 100)
> import matplotlib.pyplot as plt
> from statsmodels.formula.api import ols
> from statsmodels.graphics.api import interaction_plot, abline_plot
> from statsmodels.stats.anova import anova_lm
>
> try:
> salary_table = pd.read_csv("salary.table")
> except: # recent pandas can read URL without urlopen
> url = "http://stats191.stanford.edu/data/salary.table"
> fh = urlopen(url)
> salary_table = pd.read_table(fh)
> salary_table.to_csv("salary.table")
>
> E = salary_table.E
> M = salary_table.M
> X = salary_table.X
> S = salary_table.S
> ------------------
>
>
> ---------------------------------------------------------------------------
> FileNotFoundError Traceback (most recent call last)
> Cell In[2], line 15
> 14 try:
> ---> 15 salary_table = pd.read_csv("salary.table")
> 16 except: # recent pandas can read URL without urlopen
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:211, in deprecate_kwarg.<locals>._deprecate_kwarg.<locals>.wrapper(*args, **kwargs)
> 210 kwargs[new_arg_name] = new_arg_value
> --> 211 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:950, in read_csv(filepath_or_buffer, sep, delimiter, header, names, index_col, usecols, squeeze, prefix, mangle_dupe_cols, dtype, engine, converters, true_values, false_values, skipinitialspace, skiprows, skipfooter, nrows, na_values, keep_default_na, na_filter, verbose, skip_blank_lines, parse_dates, infer_datetime_format, keep_date_col, date_parser, dayfirst, cache_dates, iterator, chunksize, compression, thousands, decimal, lineterminator, quotechar, quoting, doublequote, escapechar, comment, encoding, encoding_errors, dialect, error_bad_lines, warn_bad_lines, on_bad_lines, delim_whitespace, low_memory, memory_map, float_precision, storage_options)
> 948 kwds.update(kwds_defaults)
> --> 950 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:856, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 854 if ioargs.encoding and "b" not in ioargs.mode:
> 855 # Encoding
> --> 856 handle = open(
> 857 handle,
> 858 ioargs.mode,
> 859 encoding=ioargs.encoding,
> 860 errors=errors,
> 861 newline="",
> 862 )
> 863 else:
> 864 # Binary mode
>
> FileNotFoundError: [Errno 2] No such file or directory: 'salary.table'
>
> During handling of the above exception, another exception occurred:
>
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 18
> 16 except: # recent pandas can read URL without urlopen
> 17 url = "http://stats191.stanford.edu/data/salary.table"
> ---> 18 fh = urlopen(url)
> 19 salary_table = pd.read_table(fh)
> 20 salary_table.to_csv("salary.table")
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1377, in HTTPHandler.http_open(self, req)
> 1376 def http_open(self, req):
> -> 1377 return self.do_open(http.client.HTTPConnection, req)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> ******************************************************************************
>
>
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/interactions_anova.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_fixed_params.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_fixed_params.ipynb
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.58518D+00 |proj g|= 5.99456D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 3 5 1 0 0 3.347D-05 2.585D+00
> F = 2.5851830060985752
>
> CONVERGENCE: REL_REDUCTION_OF_F_<=_FACTR*EPSMCH
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.03s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_stata.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_stata.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_forecasting.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_forecasting.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_fixed_params.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> from importlib import reload
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> import matplotlib.pyplot as plt
>
> from pandas_datareader.data import DataReader
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 9
> 6 import statsmodels.api as sm
> 7 import matplotlib.pyplot as plt
> ----> 9 from pandas_datareader.data import DataReader
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> from importlib import reload
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> import matplotlib.pyplot as plt
>
> from pandas_datareader.data import DataReader
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 9
> 6 import statsmodels.api as sm
> 7 import matplotlib.pyplot as plt
> ----> 9 from pandas_datareader.data import DataReader
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/gee_score_test_simulation.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gee_score_test_simulation.ipynb
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/quasibinomial.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/quasibinomial.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_stata.ipynb
> An error occurred while executing the following cell:
> ------------------
> # Dataset
> wpi1 = requests.get('https://www.stata-press.com/data/r12/wpi1.dta').content
> data = pd.read_stata(BytesIO(wpi1))
> data.index = data.t
> # Set the frequency
> data.index.freq="QS-OCT"
>
> # Fit the model
> mod = sm.tsa.statespace.SARIMAX(data['wpi'], trend='c', order=(1,1,1))
> res = mod.fit(disp=False)
> print(res.summary())
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:712, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 711 if is_new_proxy_conn and http_tunnel_required:
> --> 712 self._prepare_proxy(conn)
> 714 # Make the request on the httplib connection object.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:1010, in HTTPSConnectionPool._prepare_proxy(self, conn)
> 1008 conn.tls_in_tls_required = True
> -> 1010 conn.connect()
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:363, in HTTPSConnection.connect(self)
> 361 def connect(self):
> 362 # Add certificate verification
> --> 363 self.sock = conn = self._new_conn()
> 364 hostname = self.host
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPSConnectionPool(host='www.stata-press.com', port=443): Max retries exceeded with url: /data/r12/wpi1.dta (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 2
> 1 # Dataset
> ----> 2 wpi1 = requests.get('https://www.stata-press.com/data/r12/wpi1.dta').content
> 3 data = pd.read_stata(BytesIO(wpi1))
> 4 data.index = data.t
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPSConnectionPool(host='www.stata-press.com', port=443): Max retries exceeded with url: /data/r12/wpi1.dta (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> An error occurred while executing the following cell:
> ------------------
> # Dataset
> wpi1 = requests.get('https://www.stata-press.com/data/r12/wpi1.dta').content
> data = pd.read_stata(BytesIO(wpi1))
> data.index = data.t
> # Set the frequency
> data.index.freq="QS-OCT"
>
> # Fit the model
> mod = sm.tsa.statespace.SARIMAX(data['wpi'], trend='c', order=(1,1,1))
> res = mod.fit(disp=False)
> print(res.summary())
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:712, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 711 if is_new_proxy_conn and http_tunnel_required:
> --> 712 self._prepare_proxy(conn)
> 714 # Make the request on the httplib connection object.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:1010, in HTTPSConnectionPool._prepare_proxy(self, conn)
> 1008 conn.tls_in_tls_required = True
> -> 1010 conn.connect()
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:363, in HTTPSConnection.connect(self)
> 361 def connect(self):
> 362 # Add certificate verification
> --> 363 self.sock = conn = self._new_conn()
> 364 hostname = self.host
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPSConnectionPool(host='www.stata-press.com', port=443): Max retries exceeded with url: /data/r12/wpi1.dta (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 2
> 1 # Dataset
> ----> 2 wpi1 = requests.get('https://www.stata-press.com/data/r12/wpi1.dta').content
> 3 data = pd.read_stata(BytesIO(wpi1))
> 4 data.index = data.t
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPSConnectionPool(host='www.stata-press.com', port=443): Max retries exceeded with url: /data/r12/wpi1.dta (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f3128864750>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_cycles.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_cycles.ipynb
> 0.01s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.32873D+00 |proj g|= 8.23649D-03
>
> At iterate 5 f= 2.32864D+00 |proj g|= 1.41994D-03
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 8 10 1 0 0 5.820D-06 2.329D+00
> F = 2.3286389358138591
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.23132D+00 |proj g|= 1.09171D-02
>
> At iterate 5 f= 2.23109D+00 |proj g|= 3.93607D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 6 8 1 0 0 7.066D-07 2.231D+00
> F = 2.2310884444664749
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.22839D+00 |proj g|= 2.38555D-03
>
> At iterate 5 f= 2.22838D+00 |proj g|= 9.78329D-08
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 5 8 1 0 0 9.783D-08 2.228D+00
> F = 2.2283821699856365
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.23132D+00 |proj g|= 1.09171D-02
>
> At iterate 5 f= 2.23109D+00 |proj g|= 3.93607D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 6 8 1 0 0 7.066D-07 2.231D+00
> F = 2.2310884444664749
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 3 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 2.23132D+00 |proj g|= 1.09171D-02
>
> At iterate 5 f= 2.23109D+00 |proj g|= 3.93607D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 3 6 8 1 0 0 7.066D-07 2.231D+00
> F = 2.2310884444664749
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> Executing /<<PKGBUILDDIR>>/examples/notebooks/rolling_ls.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/rolling_ls.ipynb
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 2 M = 10
> This problem is unconstrained.
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 1.37900D-01 |proj g|= 4.66940D-01
>
> At iterate 5 f= 1.32476D-01 |proj g|= 6.00133D-06
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 2 5 10 1 0 0 6.001D-06 1.325D-01
> F = 0.13247641992895681
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_cycles.ipynb
> An error occurred while executing the following cell:
> ------------------
> from pandas_datareader.data import DataReader
> endog = DataReader('UNRATE', 'fred', start='1954-01-01')
> endog.index.freq = endog.index.inferred_freq
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[3], line 1
> ----> 1 from pandas_datareader.data import DataReader
> 2 endog = DataReader('UNRATE', 'fred', start='1954-01-01')
> 3 endog.index.freq = endog.index.inferred_freq
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> from pandas_datareader.data import DataReader
> endog = DataReader('UNRATE', 'fred', start='1954-01-01')
> endog.index.freq = endog.index.inferred_freq
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[3], line 1
> ----> 1 from pandas_datareader.data import DataReader
> 2 endog = DataReader('UNRATE', 'fred', start='1954-01-01')
> 3 endog.index.freq = endog.index.inferred_freq
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/plots_boxplots.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/plots_boxplots.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/contrasts.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/contrasts.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.06s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/kernel_density.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/kernel_density.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/rolling_ls.ipynb
> An error occurred while executing the following cell:
> ------------------
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn
>
> import statsmodels.api as sm
> from statsmodels.regression.rolling import RollingOLS
>
> seaborn.set_style("darkgrid")
> pd.plotting.register_matplotlib_converters()
> %matplotlib inline
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import numpy as np
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn
> 7 import statsmodels.api as sm
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn
>
> import statsmodels.api as sm
> from statsmodels.regression.rolling import RollingOLS
>
> seaborn.set_style("darkgrid")
> pd.plotting.register_matplotlib_converters()
> %matplotlib inline
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import numpy as np
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn
> 7 import statsmodels.api as sm
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/chi2_fitting.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/chi2_fitting.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_internet.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_internet.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/contrasts.ipynb
> An error occurred while executing the following cell:
> ------------------
> import pandas as pd
>
> url = "https://stats.idre.ucla.edu/stat/data/hsb2.csv"
> hsb2 = pd.read_table(url, delimiter=",")
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 4
> 1 import pandas as pd
> 3 url = "https://stats.idre.ucla.edu/stat/data/hsb2.csv"
> ----> 4 hsb2 = pd.read_table(url, delimiter=",")
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:211, in deprecate_kwarg.<locals>._deprecate_kwarg.<locals>.wrapper(*args, **kwargs)
> 209 else:
> 210 kwargs[new_arg_name] = new_arg_value
> --> 211 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1289, in read_table(filepath_or_buffer, sep, delimiter, header, names, index_col, usecols, squeeze, prefix, mangle_dupe_cols, dtype, engine, converters, true_values, false_values, skipinitialspace, skiprows, skipfooter, nrows, na_values, keep_default_na, na_filter, verbose, skip_blank_lines, parse_dates, infer_datetime_format, keep_date_col, date_parser, dayfirst, cache_dates, iterator, chunksize, compression, thousands, decimal, lineterminator, quotechar, quoting, doublequote, escapechar, comment, encoding, encoding_errors, dialect, error_bad_lines, warn_bad_lines, on_bad_lines, delim_whitespace, low_memory, memory_map, float_precision, storage_options)
> 1274 kwds_defaults = _refine_defaults_read(
> 1275 dialect,
> 1276 delimiter,
> (...)
> 1285 defaults={"delimiter": "\t"},
> 1286 )
> 1287 kwds.update(kwds_defaults)
> -> 1289 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 602 _validate_names(kwds.get("names", None))
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
> 608 return parser
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1439 self.options["has_index_names"] = kwds["has_index_names"]
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1733 if "b" not in mode:
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
> 1746 f = self.handles.handle
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> An error occurred while executing the following cell:
> ------------------
> import pandas as pd
>
> url = "https://stats.idre.ucla.edu/stat/data/hsb2.csv"
> hsb2 = pd.read_table(url, delimiter=",")
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 4
> 1 import pandas as pd
> 3 url = "https://stats.idre.ucla.edu/stat/data/hsb2.csv"
> ----> 4 hsb2 = pd.read_table(url, delimiter=",")
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:211, in deprecate_kwarg.<locals>._deprecate_kwarg.<locals>.wrapper(*args, **kwargs)
> 209 else:
> 210 kwargs[new_arg_name] = new_arg_value
> --> 211 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1289, in read_table(filepath_or_buffer, sep, delimiter, header, names, index_col, usecols, squeeze, prefix, mangle_dupe_cols, dtype, engine, converters, true_values, false_values, skipinitialspace, skiprows, skipfooter, nrows, na_values, keep_default_na, na_filter, verbose, skip_blank_lines, parse_dates, infer_datetime_format, keep_date_col, date_parser, dayfirst, cache_dates, iterator, chunksize, compression, thousands, decimal, lineterminator, quotechar, quoting, doublequote, escapechar, comment, encoding, encoding_errors, dialect, error_bad_lines, warn_bad_lines, on_bad_lines, delim_whitespace, low_memory, memory_map, float_precision, storage_options)
> 1274 kwds_defaults = _refine_defaults_read(
> 1275 dialect,
> 1276 delimiter,
> (...)
> 1285 defaults={"delimiter": "\t"},
> 1286 )
> 1287 kwds.update(kwds_defaults)
> -> 1289 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 602 _validate_names(kwds.get("names", None))
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
> 608 return parser
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1439 self.options["has_index_names"] = kwds["has_index_names"]
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1733 if "b" not in mode:
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
> 1746 f = self.handles.handle
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/tsa_arma_0.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_arma_0.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/robust_models_0.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/robust_models_0.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_internet.ipynb
> An error occurred while executing the following cell:
> ------------------
> import requests
> from io import BytesIO
> from zipfile import ZipFile
>
> # Download the dataset
> dk = requests.get('http://www.ssfpack.com/files/DK-data.zip').content
> f = BytesIO(dk)
> zipped = ZipFile(f)
> df = pd.read_table(
> BytesIO(zipped.read('internet.dat')),
> skiprows=1, header=None, sep='\s+', engine='python',
> names=['internet','dinternet']
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:715, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 714 # Make the request on the httplib connection object.
> --> 715 httplib_response = self._make_request(
> 716 conn,
> 717 method,
> 718 url,
> 719 timeout=timeout_obj,
> 720 body=body,
> 721 headers=headers,
> 722 chunked=chunked,
> 723 )
> 725 # If we're going to release the connection in ``finally:``, then
> 726 # the response doesn't need to know about the connection. Otherwise
> 727 # it will also try to release it and we'll have a double-release
> 728 # mess.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:416, in HTTPConnectionPool._make_request(self, conn, method, url, timeout, chunked, **httplib_request_kw)
> 415 else:
> --> 416 conn.request(method, url, **httplib_request_kw)
> 418 # We are swallowing BrokenPipeError (errno.EPIPE) since the server is
> 419 # legitimately able to close the connection after sending a valid response.
> 420 # With this behaviour, the received response is still readable.
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:244, in HTTPConnection.request(self, method, url, body, headers)
> 243 headers["User-Agent"] = _get_default_user_agent()
> --> 244 super(HTTPConnection, self).request(method, url, body=body, headers=headers)
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:205, in HTTPConnection.connect(self)
> 204 def connect(self):
> --> 205 conn = self._new_conn()
> 206 self._prepare_conn(conn)
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://www.ssfpack.com/files/DK-data.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 6
> 3 from zipfile import ZipFile
> 5 # Download the dataset
> ----> 6 dk = requests.get('http://www.ssfpack.com/files/DK-data.zip').content
> 7 f = BytesIO(dk)
> 8 zipped = ZipFile(f)
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://www.ssfpack.com/files/DK-data.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> An error occurred while executing the following cell:
> ------------------
> import requests
> from io import BytesIO
> from zipfile import ZipFile
>
> # Download the dataset
> dk = requests.get('http://www.ssfpack.com/files/DK-data.zip').content
> f = BytesIO(dk)
> zipped = ZipFile(f)
> df = pd.read_table(
> BytesIO(zipped.read('internet.dat')),
> skiprows=1, header=None, sep='\s+', engine='python',
> names=['internet','dinternet']
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:715, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 714 # Make the request on the httplib connection object.
> --> 715 httplib_response = self._make_request(
> 716 conn,
> 717 method,
> 718 url,
> 719 timeout=timeout_obj,
> 720 body=body,
> 721 headers=headers,
> 722 chunked=chunked,
> 723 )
> 725 # If we're going to release the connection in ``finally:``, then
> 726 # the response doesn't need to know about the connection. Otherwise
> 727 # it will also try to release it and we'll have a double-release
> 728 # mess.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:416, in HTTPConnectionPool._make_request(self, conn, method, url, timeout, chunked, **httplib_request_kw)
> 415 else:
> --> 416 conn.request(method, url, **httplib_request_kw)
> 418 # We are swallowing BrokenPipeError (errno.EPIPE) since the server is
> 419 # legitimately able to close the connection after sending a valid response.
> 420 # With this behaviour, the received response is still readable.
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:244, in HTTPConnection.request(self, method, url, body, headers)
> 243 headers["User-Agent"] = _get_default_user_agent()
> --> 244 super(HTTPConnection, self).request(method, url, body=body, headers=headers)
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:205, in HTTPConnection.connect(self)
> 204 def connect(self):
> --> 205 conn = self._new_conn()
> 206 self._prepare_conn(conn)
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://www.ssfpack.com/files/DK-data.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 6
> 3 from zipfile import ZipFile
> 5 # Download the dataset
> ----> 6 dk = requests.get('http://www.ssfpack.com/files/DK-data.zip').content
> 7 f = BytesIO(dk)
> 8 zipped = ZipFile(f)
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://www.ssfpack.com/files/DK-data.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f2807206cd0>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/discrete_choice_example.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/discrete_choice_example.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_seasonal.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_seasonal.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/recursive_ls.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/recursive_ls.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/ols.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ols.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/theta-model.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/theta-model.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/recursive_ls.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> from pandas_datareader.data import DataReader
>
> np.set_printoptions(suppress=True)
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 6
> 4 import pandas as pd
> 5 import statsmodels.api as sm
> ----> 6 from pandas_datareader.data import DataReader
> 8 np.set_printoptions(suppress=True)
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> from pandas_datareader.data import DataReader
>
> np.set_printoptions(suppress=True)
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 6
> 4 import pandas as pd
> 5 import statsmodels.api as sm
> ----> 6 from pandas_datareader.data import DataReader
> 8 np.set_printoptions(suppress=True)
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/predict.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/predict.ipynb
> 0.03s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/robust_models_1.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/robust_models_1.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/theta-model.ipynb
> An error occurred while executing the following cell:
> ------------------
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn as sns
>
> plt.rc("figure", figsize=(16, 8))
> plt.rc("font", size=15)
> plt.rc("lines", linewidth=3)
> sns.set_style("darkgrid")
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import numpy as np
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn as sns
> 7 plt.rc("figure", figsize=(16, 8))
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn as sns
>
> plt.rc("figure", figsize=(16, 8))
> plt.rc("font", size=15)
> plt.rc("lines", linewidth=3)
> sns.set_style("darkgrid")
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import numpy as np
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn as sns
> 7 plt.rc("figure", figsize=(16, 8))
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/markov_autoregression.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/markov_autoregression.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/glm.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/autoregressions.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/autoregressions.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/mixed_lm_example.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_dates.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_pymc3.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_pymc3.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/markov_autoregression.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> from datetime import datetime
> from io import BytesIO
>
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import requests
> import statsmodels.api as sm
>
> # NBER recessions
> from pandas_datareader.data import DataReader
>
> usrec = DataReader(
> "USREC", "fred", start=datetime(1947, 1, 1), end=datetime(2013, 4, 1)
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 13
> 10 import statsmodels.api as sm
> 12 # NBER recessions
> ---> 13 from pandas_datareader.data import DataReader
> 15 usrec = DataReader(
> 16 "USREC", "fred", start=datetime(1947, 1, 1), end=datetime(2013, 4, 1)
> 17 )
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> from datetime import datetime
> from io import BytesIO
>
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import requests
> import statsmodels.api as sm
>
> # NBER recessions
> from pandas_datareader.data import DataReader
>
> usrec = DataReader(
> "USREC", "fred", start=datetime(1947, 1, 1), end=datetime(2013, 4, 1)
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 13
> 10 import statsmodels.api as sm
> 12 # NBER recessions
> ---> 13 from pandas_datareader.data import DataReader
> 15 usrec = DataReader(
> 16 "USREC", "fred", start=datetime(1947, 1, 1), end=datetime(2013, 4, 1)
> 17 )
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/tsa_arma_1.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_arma_1.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/autoregressions.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn as sns
> from statsmodels.tsa.api import acf, graphics, pacf
> from statsmodels.tsa.ar_model import AutoReg, ar_select_order
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import matplotlib.pyplot as plt
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn as sns
> 6 from statsmodels.tsa.api import acf, graphics, pacf
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import pandas as pd
> import pandas_datareader as pdr
> import seaborn as sns
> from statsmodels.tsa.api import acf, graphics, pacf
> from statsmodels.tsa.ar_model import AutoReg, ar_select_order
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 4
> 2 import matplotlib.pyplot as plt
> 3 import pandas as pd
> ----> 4 import pandas_datareader as pdr
> 5 import seaborn as sns
> 6 from statsmodels.tsa.api import acf, graphics, pacf
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/lowess.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/lowess.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_sarimax_pymc3.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pymc3 as pm
> import statsmodels.api as sm
> import theano
> import theano.tensor as tt
> from pandas.plotting import register_matplotlib_converters
> from pandas_datareader.data import DataReader
>
> plt.style.use("seaborn")
> register_matplotlib_converters()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 5
> 3 import numpy as np
> 4 import pandas as pd
> ----> 5 import pymc3 as pm
> 6 import statsmodels.api as sm
> 7 import theano
>
> ModuleNotFoundError: No module named 'pymc3'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
> import matplotlib.pyplot as plt
> import numpy as np
> import pandas as pd
> import pymc3 as pm
> import statsmodels.api as sm
> import theano
> import theano.tensor as tt
> from pandas.plotting import register_matplotlib_converters
> from pandas_datareader.data import DataReader
>
> plt.style.use("seaborn")
> register_matplotlib_converters()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 5
> 3 import numpy as np
> 4 import pandas as pd
> ----> 5 import pymc3 as pm
> 6 import statsmodels.api as sm
> 7 import theano
>
> ModuleNotFoundError: No module named 'pymc3'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/exponential_smoothing.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/exponential_smoothing.ipynb
> 0.01s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/regression_diagnostics.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/regression_diagnostics.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/copula.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/copula.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/ets.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ets.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_news.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_news.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 2 M = 10
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 6.27365D+00 |proj g|= 8.99900D-01
>
> At iterate 1 f= 5.31675D+00 |proj g|= 6.49791D-04
>
> At iterate 2 f= 5.30939D+00 |proj g|= 5.55467D-04
>
> At iterate 3 f= 5.29115D+00 |proj g|= 5.92415D-05
>
> At iterate 4 f= 5.29096D+00 |proj g|= 1.86518D-06
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 2 4 13 5 0 1 1.865D-06 5.291D+00
> F = 5.2909564616060694
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 1 M = 10
>
> At X0 0 variables are exactly at the bounds
>
> At iterate 0 f= 6.27365D+00 |proj g|= 8.99900D-01
>
> At iterate 1 f= 5.31675D+00 |proj g|= 0.00000D+00
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 1 1 2 1 0 1 0.000D+00 5.317D+00
> F = 5.3167544390512402
>
> CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL
> RUNNING THE L-BFGS-B CODE
>
> * * *
>
> Machine precision = 2.220D-16
> N = 9 M = 10
>
> At X0 1 variables are exactly at the bounds
>
> At iterate 0 f= 3.40132D+00 |proj g|= 9.88789D-01
>
> At iterate 1 f= 2.58255D+00 |proj g|= 9.99244D-01
>
> At iterate 2 f= 2.49918D+00 |proj g|= 2.90033D-01
>
> At iterate 3 f= 2.48198D+00 |proj g|= 2.44942D-01
>
> At iterate 4 f= 2.43118D+00 |proj g|= 7.29710D-02
>
> At iterate 5 f= 2.42924D+00 |proj g|= 7.03570D-02
>
> At iterate 6 f= 2.42851D+00 |proj g|= 4.66399D-02
>
> At iterate 7 f= 2.42794D+00 |proj g|= 2.92426D-02
>
> At iterate 8 f= 2.42784D+00 |proj g|= 2.53310D-02
>
> At iterate 9 f= 2.42721D+00 |proj g|= 1.89560D-02
>
> At iterate 10 f= 2.42622D+00 |proj g|= 3.18595D-02
>
> At iterate 11 f= 2.42512D+00 |proj g|= 3.53012D-02
>
> At iterate 12 f= 2.42383D+00 |proj g|= 3.65611D-02
>
> At iterate 13 f= 2.42196D+00 |proj g|= 4.83523D-02
>
> At iterate 14 f= 2.41828D+00 |proj g|= 5.99600D-02
>
> At iterate 15 f= 2.41131D+00 |proj g|= 6.89729D-02
>
> At iterate 16 f= 2.40200D+00 |proj g|= 7.65553D-02
>
> At iterate 17 f= 2.39384D+00 |proj g|= 8.77326D-02
>
> At iterate 18 f= 2.37916D+00 |proj g|= 1.52278D-01
>
> At iterate 19 f= 2.35437D+00 |proj g|= 2.40352D-01
>
> At iterate 20 f= 2.33831D+00 |proj g|= 2.53094D-01
>
> At iterate 21 f= 2.33773D+00 |proj g|= 2.54852D-01
>
> At iterate 22 f= 2.33765D+00 |proj g|= 2.49937D-01
>
> At iterate 23 f= 2.33765D+00 |proj g|= 2.50048D-01
> Positive dir derivative in projection
> Using the backtracking step
>
> At iterate 24 f= 2.32725D+00 |proj g|= 2.22937D-01
>
> At iterate 25 f= 2.29782D+00 |proj g|= 1.16898D-01
>
> At iterate 26 f= 2.29782D+00 |proj g|= 1.19752D-01
>
> At iterate 27 f= 2.29781D+00 |proj g|= 1.21902D-01
>
> At iterate 28 f= 2.29780D+00 |proj g|= 1.25724D-01
>
> At iterate 29 f= 2.29105D+00 |proj g|= 8.30218D-02
>
> At iterate 30 f= 2.27638D+00 |proj g|= 2.10653D-01
>
> At iterate 31 f= 2.27483D+00 |proj g|= 1.10920D-01
>
> At iterate 32 f= 2.27311D+00 |proj g|= 6.92924D-02
>
> At iterate 33 f= 2.27185D+00 |proj g|= 1.95031D-02
>
> At iterate 34 f= 2.27169D+00 |proj g|= 1.29887D-02
>
> At iterate 35 f= 2.27150D+00 |proj g|= 4.13487D-03
>
> At iterate 36 f= 2.27139D+00 |proj g|= 6.64944D-03
>
> At iterate 37 f= 2.27076D+00 |proj g|= 2.69553D-02
>
> At iterate 38 f= 2.26972D+00 |proj g|= 4.56665D-02
>
> At iterate 39 f= 2.26741D+00 |proj g|= 6.40877D-02
>
> At iterate 40 f= 2.26472D+00 |proj g|= 5.54448D-02
>
> At iterate 41 f= 2.26177D+00 |proj g|= 4.61724D-02
>
> At iterate 42 f= 2.25804D+00 |proj g|= 5.99869D-02
>
> At iterate 43 f= 2.25536D+00 |proj g|= 4.25881D-02
>
> At iterate 44 f= 2.25078D+00 |proj g|= 4.89846D-02
>
> At iterate 45 f= 2.24893D+00 |proj g|= 4.90307D-02
>
> At iterate 46 f= 2.24636D+00 |proj g|= 3.04142D-02
>
> At iterate 47 f= 2.24552D+00 |proj g|= 5.58416D-03
>
> At iterate 48 f= 2.24549D+00 |proj g|= 8.50173D-03
>
> At iterate 49 f= 2.24546D+00 |proj g|= 3.01128D-03
>
> At iterate 50 f= 2.24545D+00 |proj g|= 2.55418D-03
>
> At iterate 51 f= 2.24543D+00 |proj g|= 7.25571D-03
>
> At iterate 52 f= 2.24539D+00 |proj g|= 1.16336D-02
>
> At iterate 53 f= 2.24534D+00 |proj g|= 8.72857D-03
>
> At iterate 54 f= 2.24530D+00 |proj g|= 3.67657D-03
>
> At iterate 55 f= 2.24529D+00 |proj g|= 4.14073D-03
>
> At iterate 56 f= 2.24528D+00 |proj g|= 7.40203D-03
>
> At iterate 57 f= 2.24526D+00 |proj g|= 1.19218D-02
>
> At iterate 58 f= 2.24521D+00 |proj g|= 1.72266D-02
>
> At iterate 59 f= 2.24512D+00 |proj g|= 2.04797D-02
>
> At iterate 60 f= 2.24499D+00 |proj g|= 1.76520D-02
>
> At iterate 61 f= 2.24483D+00 |proj g|= 9.93743D-03
>
> At iterate 62 f= 2.24475D+00 |proj g|= 2.34404D-03
>
> At iterate 63 f= 2.24474D+00 |proj g|= 4.87237D-03
>
> At iterate 64 f= 2.24473D+00 |proj g|= 4.74492D-03
>
> At iterate 65 f= 2.24471D+00 |proj g|= 4.33542D-03
>
> At iterate 66 f= 2.24470D+00 |proj g|= 3.99876D-03
>
> At iterate 67 f= 2.24468D+00 |proj g|= 3.00813D-03
>
> At iterate 68 f= 2.24465D+00 |proj g|= 2.51146D-03
>
> At iterate 69 f= 2.24461D+00 |proj g|= 6.65796D-03
>
> At iterate 70 f= 2.24457D+00 |proj g|= 4.96239D-03
>
> At iterate 71 f= 2.24453D+00 |proj g|= 2.22631D-03
>
> At iterate 72 f= 2.24452D+00 |proj g|= 1.37552D-03
>
> At iterate 73 f= 2.24451D+00 |proj g|= 4.64695D-04
>
> At iterate 74 f= 2.24451D+00 |proj g|= 7.12319D-05
>
> At iterate 75 f= 2.24451D+00 |proj g|= 4.87610D-05
>
> At iterate 76 f= 2.24451D+00 |proj g|= 4.69402D-05
>
> At iterate 77 f= 2.24451D+00 |proj g|= 2.10143D-04
>
> At iterate 78 f= 2.24451D+00 |proj g|= 1.67377D-04
>
> At iterate 79 f= 2.24451D+00 |proj g|= 2.89768D-04
>
> At iterate 80 f= 2.24451D+00 |proj g|= 1.10134D-04
>
> At iterate 81 f= 2.24451D+00 |proj g|= 9.49019D-05
>
> At iterate 82 f= 2.24451D+00 |proj g|= 6.23501D-05
>
> At iterate 83 f= 2.24451D+00 |proj g|= 1.00009D-04
>
> At iterate 84 f= 2.24451D+00 |proj g|= 3.35731D-05
>
> * * *
>
> Tit = total number of iterations
> Tnf = total number of function evaluations
> Tnint = total number of segments explored during Cauchy searches
> Skip = number of BFGS updates skipped
> Nact = number of active bounds at final generalized Cauchy point
> Projg = norm of the final projected gradient
> F = final function value
>
> * * *
>
> N Tit Tnf Tnint Skip Nact Projg F
> 9 84 104 92 0 1 3.357D-05 2.245D+00
> F = 2.2445124495651143
>
> CONVERGENCE: REL_REDUCTION_OF_F_<=_FACTR*EPSMCH
> Executing /<<PKGBUILDDIR>>/examples/notebooks/ordinal_regression.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ordinal_regression.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/tsa_filters.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_filters.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/wls.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/wls.ipynb
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_news.ipynb
> An error occurred while executing the following cell:
> ------------------
> import pandas_datareader as pdr
> levels = pdr.get_data_fred(['PCEPILFE', 'CPILFESL'], start='1999', end='2019').to_period('M')
> infl = np.log(levels).diff().iloc[1:] * 1200
> infl.columns = ['PCE', 'CPI']
>
> # Remove two outliers and de-mean the series
> infl['PCE'].loc['2001-09':'2001-10'] = np.nan
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[14], line 1
> ----> 1 import pandas_datareader as pdr
> 2 levels = pdr.get_data_fred(['PCEPILFE', 'CPILFESL'], start='1999', end='2019').to_period('M')
> 3 infl = np.log(levels).diff().iloc[1:] * 1200
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> import pandas_datareader as pdr
> levels = pdr.get_data_fred(['PCEPILFE', 'CPILFESL'], start='1999', end='2019').to_period('M')
> infl = np.log(levels).diff().iloc[1:] * 1200
> infl.columns = ['PCE', 'CPI']
>
> # Remove two outliers and de-mean the series
> infl['PCE'].loc['2001-09':'2001-10'] = np.nan
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[14], line 1
> ----> 1 import pandas_datareader as pdr
> 2 levels = pdr.get_data_fred(['PCEPILFE', 'CPILFESL'], start='1999', end='2019').to_period('M')
> 3 infl = np.log(levels).diff().iloc[1:] * 1200
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/regression_plots.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/regression_plots.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.02s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/discrete_choice_overview.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/discrete_choice_overview.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/ordinal_regression.ipynb
> An error occurred while executing the following cell:
> ------------------
> url = "https://stats.idre.ucla.edu/stat/data/ologit.dta"
> data_student = pd.read_stata(url)
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 2
> 1 url = "https://stats.idre.ucla.edu/stat/data/ologit.dta"
> ----> 2 data_student = pd.read_stata(url)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:2025, in read_stata(filepath_or_buffer, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, iterator, compression, storage_options)
> 2008 @Appender(_read_stata_doc)
> 2009 @deprecate_nonkeyword_arguments(version=None, allowed_args=["filepath_or_buffer"])
> 2010 def read_stata(
> (...)
> 2022 storage_options: StorageOptions = None,
> 2023 ) -> DataFrame | StataReader:
> -> 2025 reader = StataReader(
> 2026 filepath_or_buffer,
> 2027 convert_dates=convert_dates,
> 2028 convert_categoricals=convert_categoricals,
> 2029 index_col=index_col,
> 2030 convert_missing=convert_missing,
> 2031 preserve_dtypes=preserve_dtypes,
> 2032 columns=columns,
> 2033 order_categoricals=order_categoricals,
> 2034 chunksize=chunksize,
> 2035 storage_options=storage_options,
> 2036 compression=compression,
> 2037 )
> 2039 if iterator or chunksize:
> 2040 return reader
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:1168, in StataReader.__init__(self, path_or_buf, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, compression, storage_options)
> 1165 self._lines_read = 0
> 1167 self._native_byteorder = _set_endianness(sys.byteorder)
> -> 1168 with get_handle(
> 1169 path_or_buf,
> 1170 "rb",
> 1171 storage_options=storage_options,
> 1172 is_text=False,
> 1173 compression=compression,
> 1174 ) as handles:
> 1175 # Copy to BytesIO, and ensure no encoding
> 1176 self.path_or_buf = BytesIO(handles.handle.read())
> 1178 self._read_header()
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> An error occurred while executing the following cell:
> ------------------
> url = "https://stats.idre.ucla.edu/stat/data/ologit.dta"
> data_student = pd.read_stata(url)
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[2], line 2
> 1 url = "https://stats.idre.ucla.edu/stat/data/ologit.dta"
> ----> 2 data_student = pd.read_stata(url)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:2025, in read_stata(filepath_or_buffer, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, iterator, compression, storage_options)
> 2008 @Appender(_read_stata_doc)
> 2009 @deprecate_nonkeyword_arguments(version=None, allowed_args=["filepath_or_buffer"])
> 2010 def read_stata(
> (...)
> 2022 storage_options: StorageOptions = None,
> 2023 ) -> DataFrame | StataReader:
> -> 2025 reader = StataReader(
> 2026 filepath_or_buffer,
> 2027 convert_dates=convert_dates,
> 2028 convert_categoricals=convert_categoricals,
> 2029 index_col=index_col,
> 2030 convert_missing=convert_missing,
> 2031 preserve_dtypes=preserve_dtypes,
> 2032 columns=columns,
> 2033 order_categoricals=order_categoricals,
> 2034 chunksize=chunksize,
> 2035 storage_options=storage_options,
> 2036 compression=compression,
> 2037 )
> 2039 if iterator or chunksize:
> 2040 return reader
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:1168, in StataReader.__init__(self, path_or_buf, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, compression, storage_options)
> 1165 self._lines_read = 0
> 1167 self._native_byteorder = _set_endianness(sys.byteorder)
> -> 1168 with get_handle(
> 1169 path_or_buf,
> 1170 "rb",
> 1171 storage_options=storage_options,
> 1172 is_text=False,
> 1173 compression=compression,
> 1174 ) as handles:
> 1175 # Copy to BytesIO, and ensure no encoding
> 1176 self.path_or_buf = BytesIO(handles.handle.read())
> 1178 self._read_header()
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/variance_components.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/variance_components.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/stationarity_detrending_adf_kpss.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/stationarity_detrending_adf_kpss.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_concentrated_scale.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_concentrated_scale.ipynb0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
>
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/autoregressive_distributed_lag.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/autoregressive_distributed_lag.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.01s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/distributed_estimation.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/distributed_estimation.ipynb
> 0.01s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/stl_decomposition.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/stl_decomposition.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_dfm_coincident.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_dfm_coincident.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_chandrasekhar.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_chandrasekhar.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_dfm_coincident.ipynb
> An error occurred while executing the following cell:
> ------------------
> from pandas_datareader.data import DataReader
>
> # Get the datasets from FRED
> start = '1979-01-01'
> end = '2014-12-01'
> indprod = DataReader('IPMAN', 'fred', start=start, end=end)
> income = DataReader('W875RX1', 'fred', start=start, end=end)
> sales = DataReader('CMRMTSPL', 'fred', start=start, end=end)
> emp = DataReader('PAYEMS', 'fred', start=start, end=end)
> # dta = pd.concat((indprod, income, sales, emp), axis=1)
> # dta.columns = ['indprod', 'income', 'sales', 'emp']
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[2], line 1
> ----> 1 from pandas_datareader.data import DataReader
> 3 # Get the datasets from FRED
> 4 start = '1979-01-01'
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> from pandas_datareader.data import DataReader
>
> # Get the datasets from FRED
> start = '1979-01-01'
> end = '2014-12-01'
> indprod = DataReader('IPMAN', 'fred', start=start, end=end)
> income = DataReader('W875RX1', 'fred', start=start, end=end)
> sales = DataReader('CMRMTSPL', 'fred', start=start, end=end)
> emp = DataReader('PAYEMS', 'fred', start=start, end=end)
> # dta = pd.concat((indprod, income, sales, emp), axis=1)
> # dta.columns = ['indprod', 'income', 'sales', 'emp']
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[2], line 1
> ----> 1 from pandas_datareader.data import DataReader
> 3 # Get the datasets from FRED
> 4 start = '1979-01-01'
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/gee_nested_simulation.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gee_nested_simulation.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_local_linear_trend.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_local_linear_trend.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_chandrasekhar.ipynb
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> import matplotlib.pyplot as plt
>
> from pandas_datareader.data import DataReader
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 8
> 5 import statsmodels.api as sm
> 6 import matplotlib.pyplot as plt
> ----> 8 from pandas_datareader.data import DataReader
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> %matplotlib inline
>
> import numpy as np
> import pandas as pd
> import statsmodels.api as sm
> import matplotlib.pyplot as plt
>
> from pandas_datareader.data import DataReader
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[1], line 8
> 5 import statsmodels.api as sm
> 6 import matplotlib.pyplot as plt
> ----> 8 from pandas_datareader.data import DataReader
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/formulas.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/formulas.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_structural_harvey_jaeger.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_structural_harvey_jaeger.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/autoregressive_distributed_lag.ipynb
> An error occurred while executing the following cell:
> ------------------
> greene = pd.read_fwf("http://www.stern.nyu.edu/~wgreene/Text/Edition7/TableF5-2.txt")
> greene.head()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[19], line 1
> ----> 1 greene = pd.read_fwf("http://www.stern.nyu.edu/~wgreene/Text/Edition7/TableF5-2.txt")
> 2 greene.head()
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1385, in read_fwf(filepath_or_buffer, colspecs, widths, infer_nrows, **kwds)
> 1383 kwds["infer_nrows"] = infer_nrows
> 1384 kwds["engine"] = "python-fwf"
> -> 1385 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 602 _validate_names(kwds.get("names", None))
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
> 608 return parser
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1439 self.options["has_index_names"] = kwds["has_index_names"]
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1733 if "b" not in mode:
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
> 1746 f = self.handles.handle
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1377, in HTTPHandler.http_open(self, req)
> 1376 def http_open(self, req):
> -> 1377 return self.do_open(http.client.HTTPConnection, req)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> An error occurred while executing the following cell:
> ------------------
> greene = pd.read_fwf("http://www.stern.nyu.edu/~wgreene/Text/Edition7/TableF5-2.txt")
> greene.head()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[19], line 1
> ----> 1 greene = pd.read_fwf("http://www.stern.nyu.edu/~wgreene/Text/Edition7/TableF5-2.txt")
> 2 greene.head()
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1385, in read_fwf(filepath_or_buffer, colspecs, widths, infer_nrows, **kwds)
> 1383 kwds["infer_nrows"] = infer_nrows
> 1384 kwds["engine"] = "python-fwf"
> -> 1385 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 602 _validate_names(kwds.get("names", None))
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
> 608 return parser
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1439 self.options["has_index_names"] = kwds["has_index_names"]
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1733 if "b" not in mode:
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
> 1746 f = self.handles.handle
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1377, in HTTPHandler.http_open(self, req)
> 1376 def http_open(self, req):
> -> 1377 return self.do_open(http.client.HTTPConnection, req)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/glm_weights.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm_weights.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_local_linear_trend.ipynb
> An error occurred while executing the following cell:
> ------------------
> import requests
> from io import BytesIO
> from zipfile import ZipFile
>
> # Download the dataset
> ck = requests.get('http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip').content
> zipped = ZipFile(BytesIO(ck))
> df = pd.read_table(
> BytesIO(zipped.read('OxCodeIntroStateSpaceBook/Chapter_2/NorwayFinland.txt')),
> skiprows=1, header=None, sep='\s+', engine='python',
> names=['date','nf', 'ff']
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:715, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 714 # Make the request on the httplib connection object.
> --> 715 httplib_response = self._make_request(
> 716 conn,
> 717 method,
> 718 url,
> 719 timeout=timeout_obj,
> 720 body=body,
> 721 headers=headers,
> 722 chunked=chunked,
> 723 )
> 725 # If we're going to release the connection in ``finally:``, then
> 726 # the response doesn't need to know about the connection. Otherwise
> 727 # it will also try to release it and we'll have a double-release
> 728 # mess.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:416, in HTTPConnectionPool._make_request(self, conn, method, url, timeout, chunked, **httplib_request_kw)
> 415 else:
> --> 416 conn.request(method, url, **httplib_request_kw)
> 418 # We are swallowing BrokenPipeError (errno.EPIPE) since the server is
> 419 # legitimately able to close the connection after sending a valid response.
> 420 # With this behaviour, the received response is still readable.
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:244, in HTTPConnection.request(self, method, url, body, headers)
> 243 headers["User-Agent"] = _get_default_user_agent()
> --> 244 super(HTTPConnection, self).request(method, url, body=body, headers=headers)
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:205, in HTTPConnection.connect(self)
> 204 def connect(self):
> --> 205 conn = self._new_conn()
> 206 self._prepare_conn(conn)
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 6
> 3 from zipfile import ZipFile
> 5 # Download the dataset
> ----> 6 ck = requests.get('http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip').content
> 7 zipped = ZipFile(BytesIO(ck))
> 8 df = pd.read_table(
> 9 BytesIO(zipped.read('OxCodeIntroStateSpaceBook/Chapter_2/NorwayFinland.txt')),
> 10 skiprows=1, header=None, sep='\s+', engine='python',
> 11 names=['date','nf', 'ff']
> 12 )
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> An error occurred while executing the following cell:
> ------------------
> import requests
> from io import BytesIO
> from zipfile import ZipFile
>
> # Download the dataset
> ck = requests.get('http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip').content
> zipped = ZipFile(BytesIO(ck))
> df = pd.read_table(
> BytesIO(zipped.read('OxCodeIntroStateSpaceBook/Chapter_2/NorwayFinland.txt')),
> skiprows=1, header=None, sep='\s+', engine='python',
> names=['date','nf', 'ff']
> )
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connection.py:174, in HTTPConnection._new_conn(self)
> 173 try:
> --> 174 conn = connection.create_connection(
> 175 (self._dns_host, self.port), self.timeout, **extra_kw
> 176 )
> 178 except SocketTimeout:
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:96, in create_connection(address, timeout, source_address, socket_options)
> 95 if err is not None:
> ---> 96 raise err
> 98 raise socket.error("getaddrinfo returns an empty list")
>
> File /usr/lib/python3/dist-packages/urllib3/util/connection.py:86, in create_connection(address, timeout, source_address, socket_options)
> 85 sock.bind(source_address)
> ---> 86 sock.connect(sa)
> 87 return sock
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> NewConnectionError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:715, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 714 # Make the request on the httplib connection object.
> --> 715 httplib_response = self._make_request(
> 716 conn,
> 717 method,
> 718 url,
> 719 timeout=timeout_obj,
> 720 body=body,
> 721 headers=headers,
> 722 chunked=chunked,
> 723 )
> 725 # If we're going to release the connection in ``finally:``, then
> 726 # the response doesn't need to know about the connection. Otherwise
> 727 # it will also try to release it and we'll have a double-release
> 728 # mess.
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:416, in HTTPConnectionPool._make_request(self, conn, method, url, timeout, chunked, **httplib_request_kw)
> 415 else:
> --> 416 conn.request(method, url, **httplib_request_kw)
> 418 # We are swallowing BrokenPipeError (errno.EPIPE) since the server is
> 419 # legitimately able to close the connection after sending a valid response.
> 420 # With this behaviour, the received response is still readable.
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:244, in HTTPConnection.request(self, method, url, body, headers)
> 243 headers["User-Agent"] = _get_default_user_agent()
> --> 244 super(HTTPConnection, self).request(method, url, body=body, headers=headers)
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:205, in HTTPConnection.connect(self)
> 204 def connect(self):
> --> 205 conn = self._new_conn()
> 206 self._prepare_conn(conn)
>
> File /usr/lib/python3/dist-packages/urllib3/connection.py:186, in HTTPConnection._new_conn(self)
> 185 except SocketError as e:
> --> 186 raise NewConnectionError(
> 187 self, "Failed to establish a new connection: %s" % e
> 188 )
> 190 return conn
>
> NewConnectionError: <urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> MaxRetryError Traceback (most recent call last)
> File /usr/lib/python3/dist-packages/requests/adapters.py:486, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 485 try:
> --> 486 resp = conn.urlopen(
> 487 method=request.method,
> 488 url=url,
> 489 body=request.body,
> 490 headers=request.headers,
> 491 redirect=False,
> 492 assert_same_host=False,
> 493 preload_content=False,
> 494 decode_content=False,
> 495 retries=self.max_retries,
> 496 timeout=timeout,
> 497 chunked=chunked,
> 498 )
> 500 except (ProtocolError, OSError) as err:
>
> File /usr/lib/python3/dist-packages/urllib3/connectionpool.py:799, in HTTPConnectionPool.urlopen(self, method, url, body, headers, retries, redirect, assert_same_host, timeout, pool_timeout, release_conn, chunked, body_pos, **response_kw)
> 797 e = ProtocolError("Connection aborted.", e)
> --> 799 retries = retries.increment(
> 800 method, url, error=e, _pool=self, _stacktrace=sys.exc_info()[2]
> 801 )
> 802 retries.sleep()
>
> File /usr/lib/python3/dist-packages/urllib3/util/retry.py:592, in Retry.increment(self, method, url, response, error, _pool, _stacktrace)
> 591 if new_retry.is_exhausted():
> --> 592 raise MaxRetryError(_pool, url, error or ResponseError(cause))
> 594 log.debug("Incremented Retry for (url='%s'): %r", url, new_retry)
>
> MaxRetryError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> During handling of the above exception, another exception occurred:
>
> ProxyError Traceback (most recent call last)
> Cell In[3], line 6
> 3 from zipfile import ZipFile
> 5 # Download the dataset
> ----> 6 ck = requests.get('http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip').content
> 7 zipped = ZipFile(BytesIO(ck))
> 8 df = pd.read_table(
> 9 BytesIO(zipped.read('OxCodeIntroStateSpaceBook/Chapter_2/NorwayFinland.txt')),
> 10 skiprows=1, header=None, sep='\s+', engine='python',
> 11 names=['date','nf', 'ff']
> 12 )
>
> File /usr/lib/python3/dist-packages/requests/api.py:73, in get(url, params, **kwargs)
> 62 def get(url, params=None, **kwargs):
> 63 r"""Sends a GET request.
> 64
> 65 :param url: URL for the new :class:`Request` object.
> (...)
> 70 :rtype: requests.Response
> 71 """
> ---> 73 return request("get", url, params=params, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/api.py:59, in request(method, url, **kwargs)
> 55 # By using the 'with' statement we are sure the session is closed, thus we
> 56 # avoid leaving sockets open which can trigger a ResourceWarning in some
> 57 # cases, and look like a memory leak in others.
> 58 with sessions.Session() as session:
> ---> 59 return session.request(method=method, url=url, **kwargs)
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:589, in Session.request(self, method, url, params, data, headers, cookies, files, auth, timeout, allow_redirects, proxies, hooks, stream, verify, cert, json)
> 584 send_kwargs = {
> 585 "timeout": timeout,
> 586 "allow_redirects": allow_redirects,
> 587 }
> 588 send_kwargs.update(settings)
> --> 589 resp = self.send(prep, **send_kwargs)
> 591 return resp
>
> File /usr/lib/python3/dist-packages/requests/sessions.py:703, in Session.send(self, request, **kwargs)
> 700 start = preferred_clock()
> 702 # Send the request
> --> 703 r = adapter.send(request, **kwargs)
> 705 # Total elapsed time of the request (approximately)
> 706 elapsed = preferred_clock() - start
>
> File /usr/lib/python3/dist-packages/requests/adapters.py:513, in HTTPAdapter.send(self, request, stream, timeout, verify, cert, proxies)
> 510 raise RetryError(e, request=request)
> 512 if isinstance(e.reason, _ProxyError):
> --> 513 raise ProxyError(e, request=request)
> 515 if isinstance(e.reason, _SSLError):
> 516 # This branch is for urllib3 v1.22 and later.
> 517 raise SSLError(e, request=request)
>
> ProxyError: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://staff.feweb.vu.nl/koopman/projects/ckbook/OxCodeAll.zip (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fa7c101ec10>: Failed to establish a new connection: [Errno 111] Connection refused')))
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/categorical_interaction_plot.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/categorical_interaction_plot.ipynb
> 0.02s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/mediation_survival.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/mediation_survival.ipynb
> Executing /<<PKGBUILDDIR>>/examples/notebooks/quantile_regression.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/quantile_regression.ipynb
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_structural_harvey_jaeger.ipynb
> An error occurred while executing the following cell:
> ------------------
> # Datasets
> from pandas_datareader.data import DataReader
>
> # Get the raw data
> start = '1948-01'
> end = '2008-01'
> us_gnp = DataReader('GNPC96', 'fred', start=start, end=end)
> us_gnp_deflator = DataReader('GNPDEF', 'fred', start=start, end=end)
> us_monetary_base = DataReader('AMBSL', 'fred', start=start, end=end).resample('QS').mean()
> recessions = DataReader('USRECQ', 'fred', start=start, end=end).resample('QS').last().values[:,0]
>
> # Construct the dataframe
> dta = pd.concat(map(np.log, (us_gnp, us_gnp_deflator, us_monetary_base)), axis=1)
> dta.columns = ['US GNP','US Prices','US monetary base']
> dta.index.freq = dta.index.inferred_freq
> dates = dta.index._mpl_repr()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[2], line 2
> 1 # Datasets
> ----> 2 from pandas_datareader.data import DataReader
> 4 # Get the raw data
> 5 start = '1948-01'
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> An error occurred while executing the following cell:
> ------------------
> # Datasets
> from pandas_datareader.data import DataReader
>
> # Get the raw data
> start = '1948-01'
> end = '2008-01'
> us_gnp = DataReader('GNPC96', 'fred', start=start, end=end)
> us_gnp_deflator = DataReader('GNPDEF', 'fred', start=start, end=end)
> us_monetary_base = DataReader('AMBSL', 'fred', start=start, end=end).resample('QS').mean()
> recessions = DataReader('USRECQ', 'fred', start=start, end=end).resample('QS').last().values[:,0]
>
> # Construct the dataframe
> dta = pd.concat(map(np.log, (us_gnp, us_gnp_deflator, us_monetary_base)), axis=1)
> dta.columns = ['US GNP','US Prices','US monetary base']
> dta.index.freq = dta.index.inferred_freq
> dates = dta.index._mpl_repr()
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[2], line 2
> 1 # Datasets
> ----> 2 from pandas_datareader.data import DataReader
> 4 # Get the raw data
> 5 start = '1948-01'
>
> ModuleNotFoundError: No module named 'pandas_datareader'
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/statespace_varmax.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_varmax.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.03s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/generic_mle.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/generic_mle.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/glm_formula.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm_formula.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
> Executing /<<PKGBUILDDIR>>/examples/notebooks/deterministics.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/deterministics.ipynb
> 0.00s - Debugger warning: It seems that frozen modules are being used, which may
> 0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_varmax.ipynb
> An error occurred while executing the following cell:
> ------------------
> dta = sm.datasets.webuse('lutkepohl2', 'https://www.stata-press.com/data/r12/')
> dta.index = dta.qtr
> dta.index.freq = dta.index.inferred_freq
> endog = dta.loc['1960-04-01':'1978-10-01', ['dln_inv', 'dln_inc', 'dln_consump']]
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[3], line 1
> ----> 1 dta = sm.datasets.webuse('lutkepohl2', 'https://www.stata-press.com/data/r12/')
> 2 dta.index = dta.qtr
> 3 dta.index.freq = dta.index.inferred_freq
>
> File /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/datasets/utils.py:43, in webuse(data, baseurl, as_df)
> 16 """
> 17 Download and return an example dataset from Stata.
> 18
> (...)
> 40 error checking in response URLs.
> 41 """
> 42 url = urljoin(baseurl, data+'.dta')
> ---> 43 return read_stata(url)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:2025, in read_stata(filepath_or_buffer, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, iterator, compression, storage_options)
> 2008 @Appender(_read_stata_doc)
> 2009 @deprecate_nonkeyword_arguments(version=None, allowed_args=["filepath_or_buffer"])
> 2010 def read_stata(
> (...)
> 2022 storage_options: StorageOptions = None,
> 2023 ) -> DataFrame | StataReader:
> -> 2025 reader = StataReader(
> 2026 filepath_or_buffer,
> 2027 convert_dates=convert_dates,
> 2028 convert_categoricals=convert_categoricals,
> 2029 index_col=index_col,
> 2030 convert_missing=convert_missing,
> 2031 preserve_dtypes=preserve_dtypes,
> 2032 columns=columns,
> 2033 order_categoricals=order_categoricals,
> 2034 chunksize=chunksize,
> 2035 storage_options=storage_options,
> 2036 compression=compression,
> 2037 )
> 2039 if iterator or chunksize:
> 2040 return reader
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:1168, in StataReader.__init__(self, path_or_buf, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, compression, storage_options)
> 1165 self._lines_read = 0
> 1167 self._native_byteorder = _set_endianness(sys.byteorder)
> -> 1168 with get_handle(
> 1169 path_or_buf,
> 1170 "rb",
> 1171 storage_options=storage_options,
> 1172 is_text=False,
> 1173 compression=compression,
> 1174 ) as handles:
> 1175 # Copy to BytesIO, and ensure no encoding
> 1176 self.path_or_buf = BytesIO(handles.handle.read())
> 1178 self._read_header()
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> An error occurred while executing the following cell:
> ------------------
> dta = sm.datasets.webuse('lutkepohl2', 'https://www.stata-press.com/data/r12/')
> dta.index = dta.qtr
> dta.index.freq = dta.index.inferred_freq
> endog = dta.loc['1960-04-01':'1978-10-01', ['dln_inv', 'dln_inc', 'dln_consump']]
> ------------------
>
>
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[3], line 1
> ----> 1 dta = sm.datasets.webuse('lutkepohl2', 'https://www.stata-press.com/data/r12/')
> 2 dta.index = dta.qtr
> 3 dta.index.freq = dta.index.inferred_freq
>
> File /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/datasets/utils.py:43, in webuse(data, baseurl, as_df)
> 16 """
> 17 Download and return an example dataset from Stata.
> 18
> (...)
> 40 error checking in response URLs.
> 41 """
> 42 url = urljoin(baseurl, data+'.dta')
> ---> 43 return read_stata(url)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:2025, in read_stata(filepath_or_buffer, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, iterator, compression, storage_options)
> 2008 @Appender(_read_stata_doc)
> 2009 @deprecate_nonkeyword_arguments(version=None, allowed_args=["filepath_or_buffer"])
> 2010 def read_stata(
> (...)
> 2022 storage_options: StorageOptions = None,
> 2023 ) -> DataFrame | StataReader:
> -> 2025 reader = StataReader(
> 2026 filepath_or_buffer,
> 2027 convert_dates=convert_dates,
> 2028 convert_categoricals=convert_categoricals,
> 2029 index_col=index_col,
> 2030 convert_missing=convert_missing,
> 2031 preserve_dtypes=preserve_dtypes,
> 2032 columns=columns,
> 2033 order_categoricals=order_categoricals,
> 2034 chunksize=chunksize,
> 2035 storage_options=storage_options,
> 2036 compression=compression,
> 2037 )
> 2039 if iterator or chunksize:
> 2040 return reader
>
> File /usr/lib/python3/dist-packages/pandas/io/stata.py:1168, in StataReader.__init__(self, path_or_buf, convert_dates, convert_categoricals, index_col, convert_missing, preserve_dtypes, columns, order_categoricals, chunksize, compression, storage_options)
> 1165 self._lines_read = 0
> 1167 self._native_byteorder = _set_endianness(sys.byteorder)
> -> 1168 with get_handle(
> 1169 path_or_buf,
> 1170 "rb",
> 1171 storage_options=storage_options,
> 1172 is_text=False,
> 1173 compression=compression,
> 1174 ) as handles:
> 1175 # Copy to BytesIO, and ensure no encoding
> 1176 self.path_or_buf = BytesIO(handles.handle.read())
> 1178 self._read_header()
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> ******************************************************************************
>
>
> Executing /<<PKGBUILDDIR>>/examples/notebooks/influence_glm_logit.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/influence_glm_logit.ipynb
> 0.03s - Debugger warning: It seems that frozen modules are being used, which may
> 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off
> 0.00s - to python to disable frozen modules.
> 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation.
>
> ******************************************************************************
> ERROR: Error occurred when running /<<PKGBUILDDIR>>/examples/notebooks/statespace_tvpvar_mcmc_cfa.ipynb
> An error occurred while executing the following cell:
> ------------------
> import arviz as az
>
> # Collect the observation error covariance parameters
> az_obs_cov = az.convert_to_inference_data({
> ('Var[%s]' % mod.endog_names[i] if i == j else
> 'Cov[%s, %s]' % (mod.endog_names[i], mod.endog_names[j])):
> store_obs_cov[nburn + 1:, i, j]
> for i in range(mod.k_endog) for j in range(i, mod.k_endog)})
>
> # Plot the credible intervals
> az.plot_forest(az_obs_cov, figsize=(8, 7));
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[16], line 1
> ----> 1 import arviz as az
> 3 # Collect the observation error covariance parameters
> 4 az_obs_cov = az.convert_to_inference_data({
> 5 ('Var[%s]' % mod.endog_names[i] if i == j else
> 6 'Cov[%s, %s]' % (mod.endog_names[i], mod.endog_names[j])):
> 7 store_obs_cov[nburn + 1:, i, j]
> 8 for i in range(mod.k_endog) for j in range(i, mod.k_endog)})
>
> ModuleNotFoundError: No module named 'arviz'
>
> An error occurred while executing the following cell:
> ------------------
> import arviz as az
>
> # Collect the observation error covariance parameters
> az_obs_cov = az.convert_to_inference_data({
> ('Var[%s]' % mod.endog_names[i] if i == j else
> 'Cov[%s, %s]' % (mod.endog_names[i], mod.endog_names[j])):
> store_obs_cov[nburn + 1:, i, j]
> for i in range(mod.k_endog) for j in range(i, mod.k_endog)})
>
> # Plot the credible intervals
> az.plot_forest(az_obs_cov, figsize=(8, 7));
> ------------------
>
>
> ---------------------------------------------------------------------------
> ModuleNotFoundError Traceback (most recent call last)
> Cell In[16], line 1
> ----> 1 import arviz as az
> 3 # Collect the observation error covariance parameters
> 4 az_obs_cov = az.convert_to_inference_data({
> 5 ('Var[%s]' % mod.endog_names[i] if i == j else
> 6 'Cov[%s, %s]' % (mod.endog_names[i], mod.endog_names[j])):
> 7 store_obs_cov[nburn + 1:, i, j]
> 8 for i in range(mod.k_endog) for j in range(i, mod.k_endog)})
>
> ModuleNotFoundError: No module named 'arviz'
>
> ******************************************************************************
>
>
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_tvpvar_mcmc_cfa.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_faq.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gls.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_arma_0.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/metaanalysis1.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/pca_fertility_factors.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/markov_regression.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_fixed_params.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_stata.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_forecasting.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gee_score_test_simulation.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/quasibinomial.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_cycles.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/rolling_ls.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/plots_boxplots.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/contrasts.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/kernel_density.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/chi2_fitting.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_internet.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_arma_0.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/robust_models_0.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/discrete_choice_example.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_seasonal.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/recursive_ls.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ols.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/theta-model.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/predict.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/robust_models_1.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/markov_autoregression.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/autoregressions.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_sarimax_pymc3.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_arma_1.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/lowess.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/exponential_smoothing.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/regression_diagnostics.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/copula.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ets.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_news.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/ordinal_regression.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/tsa_filters.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/wls.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/regression_plots.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/discrete_choice_overview.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/variance_components.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/stationarity_detrending_adf_kpss.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_concentrated_scale.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/autoregressive_distributed_lag.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/distributed_estimation.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/stl_decomposition.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_dfm_coincident.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_chandrasekhar.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/gee_nested_simulation.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_local_linear_trend.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/formulas.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_structural_harvey_jaeger.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm_weights.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/categorical_interaction_plot.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/mediation_survival.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/quantile_regression.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_varmax.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/generic_mle.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/glm_formula.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/deterministics.ipynb
> Finished /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/influence_glm_logit.ipynb
> Copying (without executing) /<<PKGBUILDDIR>>/examples/notebooks/statespace_custom_models.ipynb to /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/statespace_custom_models.ipynb
> Finished (without execution) /<<PKGBUILDDIR>>/examples/notebooks/statespace_custom_models.ipynb
> Copying notebooks that failed execution (there are usually several in Debian because some need network and/or dependencies we don't have)
> cp -nav ../examples/notebooks/*.ipynb -t source/examples/notebooks/generated
> '../examples/notebooks/autoregressions.ipynb' -> 'source/examples/notebooks/generated/autoregressions.ipynb'
> '../examples/notebooks/autoregressive_distributed_lag.ipynb' -> 'source/examples/notebooks/generated/autoregressive_distributed_lag.ipynb'
> '../examples/notebooks/contrasts.ipynb' -> 'source/examples/notebooks/generated/contrasts.ipynb'
> '../examples/notebooks/interactions_anova.ipynb' -> 'source/examples/notebooks/generated/interactions_anova.ipynb'
> '../examples/notebooks/markov_autoregression.ipynb' -> 'source/examples/notebooks/generated/markov_autoregression.ipynb'
> '../examples/notebooks/ordinal_regression.ipynb' -> 'source/examples/notebooks/generated/ordinal_regression.ipynb'
> '../examples/notebooks/recursive_ls.ipynb' -> 'source/examples/notebooks/generated/recursive_ls.ipynb'
> '../examples/notebooks/rolling_ls.ipynb' -> 'source/examples/notebooks/generated/rolling_ls.ipynb'
> '../examples/notebooks/statespace_chandrasekhar.ipynb' -> 'source/examples/notebooks/generated/statespace_chandrasekhar.ipynb'
> '../examples/notebooks/statespace_cycles.ipynb' -> 'source/examples/notebooks/generated/statespace_cycles.ipynb'
> '../examples/notebooks/statespace_dfm_coincident.ipynb' -> 'source/examples/notebooks/generated/statespace_dfm_coincident.ipynb'
> '../examples/notebooks/statespace_fixed_params.ipynb' -> 'source/examples/notebooks/generated/statespace_fixed_params.ipynb'
> '../examples/notebooks/statespace_local_linear_trend.ipynb' -> 'source/examples/notebooks/generated/statespace_local_linear_trend.ipynb'
> '../examples/notebooks/statespace_news.ipynb' -> 'source/examples/notebooks/generated/statespace_news.ipynb'
> '../examples/notebooks/statespace_sarimax_internet.ipynb' -> 'source/examples/notebooks/generated/statespace_sarimax_internet.ipynb'
> '../examples/notebooks/statespace_sarimax_pymc3.ipynb' -> 'source/examples/notebooks/generated/statespace_sarimax_pymc3.ipynb'
> '../examples/notebooks/statespace_sarimax_stata.ipynb' -> 'source/examples/notebooks/generated/statespace_sarimax_stata.ipynb'
> '../examples/notebooks/statespace_structural_harvey_jaeger.ipynb' -> 'source/examples/notebooks/generated/statespace_structural_harvey_jaeger.ipynb'
> '../examples/notebooks/statespace_tvpvar_mcmc_cfa.ipynb' -> 'source/examples/notebooks/generated/statespace_tvpvar_mcmc_cfa.ipynb'
> '../examples/notebooks/statespace_varmax.ipynb' -> 'source/examples/notebooks/generated/statespace_varmax.ipynb'
> '../examples/notebooks/theta-model.ipynb' -> 'source/examples/notebooks/generated/theta-model.ipynb'
> Running sphinx-build
> @sphinx-build -M html source build
> Running Sphinx v7.1.1
> [autosummary] generating autosummary for: about.rst, anova.rst, api-structure.rst, api.rst, contingency_tables.rst, contrasts.rst, datasets/generated/anes96.rst, datasets/generated/cancer.rst, datasets/generated/ccard.rst, datasets/generated/china_smoking.rst, ..., release/version0.9.rst, rlm.rst, rlm_techn1.rst, sandbox.rst, statespace.rst, stats.rst, tools.rst, tsa.rst, user-guide.rst, vector_ar.rst
> [autosummary] generating autosummary for: /<<PKGBUILDDIR>>/docs/source/datasets/statsmodels.datasets.clear_data_home.rst, /<<PKGBUILDDIR>>/docs/source/datasets/statsmodels.datasets.get_data_home.rst, /<<PKGBUILDDIR>>/docs/source/datasets/statsmodels.datasets.get_rdataset.rst, /<<PKGBUILDDIR>>/docs/source/datasets/statsmodels.datasets.webuse.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.__init__.test.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModelResults.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.LikelihoodModel.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.LikelihoodModelResults.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.Model.rst, ..., /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.var_model.VARResults.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.CointRankResults.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.JohansenTestResult.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECM.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.coint_johansen.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.select_coint_rank.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.select_order.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.x13.x13_arima_analysis.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.x13.x13_arima_select_order.rst
> [autosummary] generating autosummary for: /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.endog_names.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.exog_names.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.expandparams.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.fit.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.from_formula.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.hessian.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.hessian_factor.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.information.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.initialize.rst, /<<PKGBUILDDIR>>/docs/source/dev/generated/statsmodels.base.model.GenericLikelihoodModel.loglike.rst, ..., /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.test_granger_causality.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.test_inst_causality.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.test_normality.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.test_whiteness.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.tvalues_alpha.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.tvalues_beta.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.tvalues_det_coef.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.tvalues_det_coef_coint.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.tvalues_gamma.rst, /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.tsa.vector_ar.vecm.VECMResults.var_rep.rst
> loading intersphinx inventory from https://docs.scipy.org/doc/numpy/objects.inv...
> loading intersphinx inventory from /usr/share/doc/python3-doc/html/objects.inv...
> loading intersphinx inventory from https://matthew-brett.github.io/pydagogue/objects.inv...
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> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 50
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> ConnectionRefusedError Traceback (most recent call last)
> File /usr/lib/python3.11/urllib/request.py:1348, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1347 try:
> -> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
>
> File /usr/lib/python3.11/http/client.py:1286, in HTTPConnection.request(self, method, url, body, headers, encode_chunked)
> 1285 """Send a complete request to the server."""
> -> 1286 self._send_request(method, url, body, headers, encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1332, in HTTPConnection._send_request(self, method, url, body, headers, encode_chunked)
> 1331 body = _encode(body, 'body')
> -> 1332 self.endheaders(body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1281, in HTTPConnection.endheaders(self, message_body, encode_chunked)
> 1280 raise CannotSendHeader()
> -> 1281 self._send_output(message_body, encode_chunked=encode_chunked)
>
> File /usr/lib/python3.11/http/client.py:1041, in HTTPConnection._send_output(self, message_body, encode_chunked)
> 1040 del self._buffer[:]
> -> 1041 self.send(msg)
> 1043 if message_body is not None:
> 1044
> 1045 # create a consistent interface to message_body
>
> File /usr/lib/python3.11/http/client.py:979, in HTTPConnection.send(self, data)
> 978 if self.auto_open:
> --> 979 self.connect()
> 980 else:
>
> File /usr/lib/python3.11/http/client.py:1451, in HTTPSConnection.connect(self)
> 1449 "Connect to a host on a given (SSL) port."
> -> 1451 super().connect()
> 1453 if self._tunnel_host:
>
> File /usr/lib/python3.11/http/client.py:945, in HTTPConnection.connect(self)
> 944 sys.audit("http.client.connect", self, self.host, self.port)
> --> 945 self.sock = self._create_connection(
> 946 (self.host,self.port), self.timeout, self.source_address)
> 947 # Might fail in OSs that don't implement TCP_NODELAY
>
> File /usr/lib/python3.11/socket.py:851, in create_connection(address, timeout, source_address, all_errors)
> 850 if not all_errors:
> --> 851 raise exceptions[0]
> 852 raise ExceptionGroup("create_connection failed", exceptions)
>
> File /usr/lib/python3.11/socket.py:836, in create_connection(address, timeout, source_address, all_errors)
> 835 sock.bind(source_address)
> --> 836 sock.connect(sa)
> 837 # Break explicitly a reference cycle
>
> ConnectionRefusedError: [Errno 111] Connection refused
>
> During handling of the above exception, another exception occurred:
>
> URLError Traceback (most recent call last)
> Cell In[3], line 1
> ----> 1 hsb2 = pandas.read_csv(url)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:211, in deprecate_kwarg.<locals>._deprecate_kwarg.<locals>.wrapper(*args, **kwargs)
> 209 else:
> 210 kwargs[new_arg_name] = new_arg_value
> --> 211 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/util/_decorators.py:331, in deprecate_nonkeyword_arguments.<locals>.decorate.<locals>.wrapper(*args, **kwargs)
> 325 if len(args) > num_allow_args:
> 326 warnings.warn(
> 327 msg.format(arguments=_format_argument_list(allow_args)),
> 328 FutureWarning,
> 329 stacklevel=find_stack_level(),
> 330 )
> --> 331 return func(*args, **kwargs)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:950, in read_csv(filepath_or_buffer, sep, delimiter, header, names, index_col, usecols, squeeze, prefix, mangle_dupe_cols, dtype, engine, converters, true_values, false_values, skipinitialspace, skiprows, skipfooter, nrows, na_values, keep_default_na, na_filter, verbose, skip_blank_lines, parse_dates, infer_datetime_format, keep_date_col, date_parser, dayfirst, cache_dates, iterator, chunksize, compression, thousands, decimal, lineterminator, quotechar, quoting, doublequote, escapechar, comment, encoding, encoding_errors, dialect, error_bad_lines, warn_bad_lines, on_bad_lines, delim_whitespace, low_memory, memory_map, float_precision, storage_options)
> 935 kwds_defaults = _refine_defaults_read(
> 936 dialect,
> 937 delimiter,
> (...)
> 946 defaults={"delimiter": ","},
> 947 )
> 948 kwds.update(kwds_defaults)
> --> 950 return _read(filepath_or_buffer, kwds)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:605, in _read(filepath_or_buffer, kwds)
> 602 _validate_names(kwds.get("names", None))
> 604 # Create the parser.
> --> 605 parser = TextFileReader(filepath_or_buffer, **kwds)
> 607 if chunksize or iterator:
> 608 return parser
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1442, in TextFileReader.__init__(self, f, engine, **kwds)
> 1439 self.options["has_index_names"] = kwds["has_index_names"]
> 1441 self.handles: IOHandles | None = None
> -> 1442 self._engine = self._make_engine(f, self.engine)
>
> File /usr/lib/python3/dist-packages/pandas/io/parsers/readers.py:1735, in TextFileReader._make_engine(self, f, engine)
> 1733 if "b" not in mode:
> 1734 mode += "b"
> -> 1735 self.handles = get_handle(
> 1736 f,
> 1737 mode,
> 1738 encoding=self.options.get("encoding", None),
> 1739 compression=self.options.get("compression", None),
> 1740 memory_map=self.options.get("memory_map", False),
> 1741 is_text=is_text,
> 1742 errors=self.options.get("encoding_errors", "strict"),
> 1743 storage_options=self.options.get("storage_options", None),
> 1744 )
> 1745 assert self.handles is not None
> 1746 f = self.handles.handle
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:713, in get_handle(path_or_buf, mode, encoding, compression, memory_map, is_text, errors, storage_options)
> 710 codecs.lookup_error(errors)
> 712 # open URLs
> --> 713 ioargs = _get_filepath_or_buffer(
> 714 path_or_buf,
> 715 encoding=encoding,
> 716 compression=compression,
> 717 mode=mode,
> 718 storage_options=storage_options,
> 719 )
> 721 handle = ioargs.filepath_or_buffer
> 722 handles: list[BaseBuffer]
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:363, in _get_filepath_or_buffer(filepath_or_buffer, encoding, compression, mode, storage_options)
> 361 # assuming storage_options is to be interpreted as headers
> 362 req_info = urllib.request.Request(filepath_or_buffer, headers=storage_options)
> --> 363 with urlopen(req_info) as req:
> 364 content_encoding = req.headers.get("Content-Encoding", None)
> 365 if content_encoding == "gzip":
> 366 # Override compression based on Content-Encoding header
>
> File /usr/lib/python3/dist-packages/pandas/io/common.py:265, in urlopen(*args, **kwargs)
> 259 """
> 260 Lazy-import wrapper for stdlib urlopen, as that imports a big chunk of
> 261 the stdlib.
> 262 """
> 263 import urllib.request
> --> 265 return urllib.request.urlopen(*args, **kwargs)
>
> File /usr/lib/python3.11/urllib/request.py:216, in urlopen(url, data, timeout, cafile, capath, cadefault, context)
> 214 else:
> 215 opener = _opener
> --> 216 return opener.open(url, data, timeout)
>
> File /usr/lib/python3.11/urllib/request.py:519, in OpenerDirector.open(self, fullurl, data, timeout)
> 516 req = meth(req)
> 518 sys.audit('urllib.Request', req.full_url, req.data, req.headers, req.get_method())
> --> 519 response = self._open(req, data)
> 521 # post-process response
> 522 meth_name = protocol+"_response"
>
> File /usr/lib/python3.11/urllib/request.py:536, in OpenerDirector._open(self, req, data)
> 533 return result
> 535 protocol = req.type
> --> 536 result = self._call_chain(self.handle_open, protocol, protocol +
> 537 '_open', req)
> 538 if result:
> 539 return result
>
> File /usr/lib/python3.11/urllib/request.py:496, in OpenerDirector._call_chain(self, chain, kind, meth_name, *args)
> 494 for handler in handlers:
> 495 func = getattr(handler, meth_name)
> --> 496 result = func(*args)
> 497 if result is not None:
> 498 return result
>
> File /usr/lib/python3.11/urllib/request.py:1391, in HTTPSHandler.https_open(self, req)
> 1390 def https_open(self, req):
> -> 1391 return self.do_open(http.client.HTTPSConnection, req,
> 1392 context=self._context, check_hostname=self._check_hostname)
>
> File /usr/lib/python3.11/urllib/request.py:1351, in AbstractHTTPHandler.do_open(self, http_class, req, **http_conn_args)
> 1348 h.request(req.get_method(), req.selector, req.data, headers,
> 1349 encode_chunked=req.has_header('Transfer-encoding'))
> 1350 except OSError as err: # timeout error
> -> 1351 raise URLError(err)
> 1352 r = h.getresponse()
> 1353 except:
>
> URLError: <urlopen error [Errno 111] Connection refused>
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 56
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[4], line 1
> ----> 1 hsb2.groupby('race')['write'].mean()
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 74
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[9], line 1
> ----> 1 contrast.matrix[hsb2.race-1, :][:20]
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 83
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[11], line 1
> ----> 1 mod = ols("write ~ C(race, Treatment)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 83
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[12], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 83
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[13], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 100
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[16], line 1
> ----> 1 mod = ols("write ~ C(race, Simple)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 100
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[17], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 100
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[18], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 115
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[22], line 1
> ----> 1 mod = ols("write ~ C(race, Sum)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 115
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[23], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 115
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[24], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 121
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[25], line 1
> ----> 1 hsb2.groupby('race')['write'].mean().mean()
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 136
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[29], line 1
> ----> 1 mod = ols("write ~ C(race, Diff)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 136
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[30], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 136
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[31], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 144
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[32], line 1
> ----> 1 res.params["C(race, Diff)[D.1]"]
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 144
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[33], line 1
> ----> 1 hsb2.groupby('race').mean()["write"].loc[2] - \
> 2 hsb2.groupby('race').mean()["write"].loc[1]
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 159
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[37], line 1
> ----> 1 mod = ols("write ~ C(race, Helmert)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 159
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[38], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 159
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[39], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 166
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[40], line 1
> ----> 1 grouped = hsb2.groupby('race')
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 166
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[41], line 1
> ----> 1 grouped.mean()["write"].loc[4] - grouped.mean()["write"].loc[:3].mean()
>
> NameError: name 'grouped' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 176
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[43], line 1
> ----> 1 1./k * (grouped.mean()["write"].loc[k] - grouped.mean()["write"].loc[:k-1].mean())
>
> NameError: name 'grouped' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 176
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[45], line 1
> ----> 1 1./k * (grouped.mean()["write"].loc[k] - grouped.mean()["write"].loc[:k-1].mean())
>
> NameError: name 'grouped' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 191
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[46], line 1
> ----> 1 _, bins = np.histogram(hsb2.read, 3)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 191
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[47], line 2
> 1 try: # requires numpy main
> ----> 2 readcat = np.digitize(hsb2.read, bins, True)
> 3 except:
>
> NameError: name 'hsb2' is not defined
>
> During handling of the above exception, another exception occurred:
>
> NameError Traceback (most recent call last)
> Cell In[47], line 4
> 2 readcat = np.digitize(hsb2.read, bins, True)
> 3 except:
> ----> 4 readcat = np.digitize(hsb2.read, bins)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 191
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[48], line 1
> ----> 1 hsb2['readcat'] = readcat
>
> NameError: name 'readcat' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 191
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[49], line 1
> ----> 1 hsb2.groupby('readcat').mean()['write']
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 202
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[51], line 1
> ----> 1 levels = hsb2.readcat.unique().tolist()
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 202
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[54], line 1
> ----> 1 mod = ols("write ~ C(readcat, Poly)", data=hsb2)
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 202
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[55], line 1
> ----> 1 res = mod.fit()
>
> NameError: name 'mod' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 202
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[56], line 1
> ----> 1 print(res.summary())
>
> NameError: name 'res' is not defined
>
> <<<-------------------------------------------------------------------------
> WARNING:
> >>>-------------------------------------------------------------------------
> Exception in /<<PKGBUILDDIR>>/docs/source/contrasts.rst at block ending on line 237
> Specify :okexcept: as an option in the ipython:: block to suppress this message
> ---------------------------------------------------------------------------
> NameError Traceback (most recent call last)
> Cell In[60], line 1
> ----> 1 mod = ols("write ~ C(race, Simple)", data=hsb2)
> 2 res = mod.fit()
> 3 print(res.summary())
>
> NameError: name 'hsb2' is not defined
>
> <<<-------------------------------------------------------------------------
> /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/formulas.ipynb:211: WARNING: File not found: 'examples/notebooks/generated/regression_diagnostics.html'
> /<<PKGBUILDDIR>>/docs/source/examples/notebooks/generated/formulas.ipynb:564: WARNING: File not found: 'examples/notebooks/generated/contrasts.html'
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.rst:2: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog:statsmodels.genmod.families.links.cloglog, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog.deriv:statsmodels.genmod.families.links.cloglog.deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog.deriv2:statsmodels.genmod.families.links.cloglog.deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.inverse.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog.inverse:statsmodels.genmod.families.links.cloglog.inverse, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.inverse.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.inverse_deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog.inverse_deriv:statsmodels.genmod.families.links.cloglog.inverse\_deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.inverse_deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.cloglog.inverse_deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.cloglog.inverse_deriv2:statsmodels.genmod.families.links.cloglog.inverse\_deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.CLogLog.inverse_deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.rst:2: WARNING: duplicate label generated/statsmodels.genmod.families.links.log:statsmodels.genmod.families.links.log, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.log.deriv:statsmodels.genmod.families.links.log.deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.log.deriv2:statsmodels.genmod.families.links.log.deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.inverse.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.log.inverse:statsmodels.genmod.families.links.log.inverse, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.inverse.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.inverse_deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.log.inverse_deriv:statsmodels.genmod.families.links.log.inverse\_deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.inverse_deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.log.inverse_deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.log.inverse_deriv2:statsmodels.genmod.families.links.log.inverse\_deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Log.inverse_deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.rst:2: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit:statsmodels.genmod.families.links.logit, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit.deriv:statsmodels.genmod.families.links.logit.deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit.deriv2:statsmodels.genmod.families.links.logit.deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.inverse.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit.inverse:statsmodels.genmod.families.links.logit.inverse, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.inverse.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.inverse_deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit.inverse_deriv:statsmodels.genmod.families.links.logit.inverse\_deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.inverse_deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.logit.inverse_deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.logit.inverse_deriv2:statsmodels.genmod.families.links.logit.inverse\_deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.Logit.inverse_deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.rst:2: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog:statsmodels.genmod.families.links.loglog, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog.deriv:statsmodels.genmod.families.links.loglog.deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog.deriv2:statsmodels.genmod.families.links.loglog.deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.deriv2.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.inverse.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog.inverse:statsmodels.genmod.families.links.loglog.inverse, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.inverse.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.inverse_deriv.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog.inverse_deriv:statsmodels.genmod.families.links.loglog.inverse\_deriv, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.inverse_deriv.rst
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.loglog.inverse_deriv2.rst:4: WARNING: duplicate label generated/statsmodels.genmod.families.links.loglog.inverse_deriv2:statsmodels.genmod.families.links.loglog.inverse\_deriv2, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.genmod.families.links.LogLog.inverse_deriv2.rst
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/miscmodels/ordinal_model.py:docstring of statsmodels.miscmodels.ordinal_model.OrderedResults:81: CRITICAL: Unexpected section title.
>
> References
> ----------
> /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.multivariate.pca.pca.rst:2: WARNING: duplicate label generated/statsmodels.multivariate.pca.pca:statsmodels.multivariate.pca.pca, other instance in /<<PKGBUILDDIR>>/docs/source/generated/statsmodels.multivariate.pca.PCA.rst
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/nonparametric/kde.py:docstring of statsmodels.nonparametric.kde.KDEUnivariate:54: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/nonparametric/kde.py:docstring of statsmodels.nonparametric.kde.KDEUnivariate:61: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/nonparametric/kde.py:docstring of statsmodels.nonparametric.kde.KDEUnivariate:68: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/nonparametric/kde.py:docstring of statsmodels.nonparametric.kde.KDEUnivariate:76: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/nonparametric/kde.py:docstring of statsmodels.nonparametric.kde.KDEUnivariate:84: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/linear_model.py:docstring of statsmodels.regression.linear_model.OLSResults:63: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/linear_model.py:docstring of statsmodels.regression.linear_model.OLSResults:75: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/linear_model.py:docstring of statsmodels.regression.linear_model.OLSResults:86: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/linear_model.py:docstring of statsmodels.regression.linear_model.OLSResults:98: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/linear_model.py:docstring of statsmodels.regression.linear_model.OLSResults:201: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/regression/quantile_regression.py:docstring of statsmodels.regression.quantile_regression.QuantRegResults:121: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/sandbox/regression/gmm.py:docstring of statsmodels.sandbox.regression.gmm.IVRegressionResults:35: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/sandbox/regression/gmm.py:docstring of statsmodels.sandbox.regression.gmm.IVRegressionResults:47: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/sandbox/regression/gmm.py:docstring of statsmodels.sandbox.regression.gmm.IVRegressionResults:58: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/sandbox/regression/gmm.py:docstring of statsmodels.sandbox.regression.gmm.IVRegressionResults:70: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/sandbox/regression/gmm.py:docstring of statsmodels.sandbox.regression.gmm.IVRegressionResults:168: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/contingency_tables.py:docstring of statsmodels.stats.contingency_tables.SquareTable:86: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/contingency_tables.py:docstring of statsmodels.stats.contingency_tables.StratifiedTable:42: CRITICAL: Unexpected section title.
>
> References
> ----------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/contingency_tables.py:docstring of statsmodels.stats.contingency_tables.Table2x2:99: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/outliers_influence.py:docstring of statsmodels.stats.outliers_influence.OLSInfluence:47: CRITICAL: Unexpected section title.
>
> References
> ----------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/outliers_influence.py:docstring of statsmodels.stats.outliers_influence.OLSInfluence:84: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/outliers_influence.py:docstring of statsmodels.stats.outliers_influence.OLSInfluence:89: CRITICAL: Unexpected section title.
>
> References
> ----------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/outliers_influence.py:docstring of statsmodels.stats.outliers_influence.OLSInfluence:111: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/stats/outliers_influence.py:docstring of statsmodels.stats.outliers_influence.OLSInfluence:131: CRITICAL: Unexpected section title.
>
> See Also
> --------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/tsa/statespace/dynamic_factor_mq.py:docstring of statsmodels.tsa.statespace.dynamic_factor_mq.DynamicFactorMQResults:38: CRITICAL: Unexpected section title.
>
> Returns
> -------
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/tsa/statespace/dynamic_factor_mq.py:docstring of statsmodels.tsa.statespace.dynamic_factor_mq.DynamicFactorMQResults:46: CRITICAL: Unexpected section title.
>
> Notes
> -----
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_statsmodels/build/statsmodels/tsa/statespace/dynamic_factor_mq.py:docstring of statsmodels.tsa.statespace.dynamic_factor_mq.DynamicFactorMQResults:57: CRITICAL: Unexpected section title.
>
> See Also
> --------
> /<<PKGBUILDDIR>>/docs/source/glm.rst:144: WARNING: duplicate object description of statsmodels.genmod.families.family, other instance in gee, use :noindex: for one of them
>
> Exception occurred:
> File "/usr/lib/python3/dist-packages/sphinx/ext/extlinks.py", line 103, in role
> title = caption % part
> ~~~~~~~~^~~~~~
> TypeError: not all arguments converted during string formatting
> The full traceback has been saved in /tmp/sphinx-err-0mee_gtw.log, if you want to report the issue to the developers.
> Please also report this if it was a user error, so that a better error message can be provided next time.
> A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
> make[2]: *** [Makefile:41: html] Error 2
The full build log is available from:
http://qa-logs.debian.net/2023/07/30/exp/statsmodels_0.13.5+dfsg-7_unstable_sphinx-exp.log
Please see [1] for Sphinx changelog and [2] for Docutils changelog.
Also see [3] for the list of deprecated/removed APIs in Sphinx and possible
alternatives to them.
Some notable changes in Sphinx 6 and Sphinx 7:
- Sphinx no longer includes jquery.js and underscore.js by default.
Please use python3-sphinxcontrib.jquery package if you are using a custom
template and it still needs jquery.
- The setup.py build_sphinx command was removed. Please instead call
sphinx-build or "python3 -m sphinx" directly.
- For packages using the extlinks extension, the caption should contain
exactly one "%s" placeholder (if caption is not None).
In case you have questions, please Cc sphinx at packages.debian.org on reply.
[1]: https://www.sphinx-doc.org/en/master/changes.html
[2]: https://repo.or.cz/docutils.git/blob/refs/tags/docutils-0.20.1:/RELEASE-NOTES.txt
[3]: https://www.sphinx-doc.org/en/master/extdev/deprecated.html#dev-deprecated-apis
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=sphinx7.1;users=python-modules-team@lists.alioth.debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=sphinx7.1&fusertaguser=python-modules-team@lists.alioth.debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
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