Bug#1037874: trilinos: ftbfs with GCC-13
Matthias Klose
doko at debian.org
Wed Jun 14 10:31:59 BST 2023
Package: src:trilinos
Version: 13.2.0-4
Severity: normal
Tags: sid trixie
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-13
[This bug is targeted to the upcoming trixie release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-13/g++-13, but succeeds to build with gcc-12/g++-12. The
severity of this report will be raised before the trixie release.
The full build log can be found at:
http://qa-logs.debian.net/2023/05/22/logs/trilinos_13.2.0-4_unstable_gccexp.log
The last lines of the build log are at the end of this report.
To build with GCC 13, either set CC=gcc-13 CXX=g++-13 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-13/porting_to.html
[...]
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_heap.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_heap.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_heap.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_heap.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_heap.c
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_init.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_init.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_init.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_init.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_init.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface_l.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface_l.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface_l.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface_l.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt/im_ne_c_interface_l.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_mesh_specification.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_mesh_specification.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_mesh_specification.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_mesh_specification.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt/pamgen_mesh_specification.C
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_obj_list.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_obj_list.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_obj_list.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_obj_list.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_obj_list.c
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_rand.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_rand.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_rand.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_rand.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_rand.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_fudges.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_fudges.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_fudges.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_fudges.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt/pamgen_fudges.C
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_set_fn.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_set_fn.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_set_fn.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_set_fn.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_set_fn.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_element_dictionary.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_element_dictionary.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_element_dictionary.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_element_dictionary.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt/pamgen_element_dictionary.C
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_sort.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_sort.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_sort.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_sort.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_sort.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Bessel_I.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Bessel_I.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Bessel_I.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Bessel_I.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Bessel_I.C
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_struct.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_struct.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_struct.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_struct.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_struct.c
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_back_trace.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_back_trace.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_back_trace.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_back_trace.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_back_trace.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Block.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Block.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Block.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Block.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Block.C
[ 12%] Building C object packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_util.c.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/mpicc -Dtrilinos_zoltan_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src -I/<<PKGBUILDDIR>>/packages/zoltan/src/include -I/<<PKGBUILDDIR>>/packages/zoltan/src/all -I/<<PKGBUILDDIR>>/packages/zoltan/src/coloring -I/<<PKGBUILDDIR>>/packages/zoltan/src/graph -I/<<PKGBUILDDIR>>/packages/zoltan/src/ha -I/<<PKGBUILDDIR>>/packages/zoltan/src/hier -I/<<PKGBUILDDIR>>/packages/zoltan/src/hsfc -I/<<PKGBUILDDIR>>/packages/zoltan/src/lb -I/<<PKGBUILDDIR>>/packages/zoltan/src/matrix -I/<<PKGBUILDDIR>>/packages/zoltan/src/order -I/<<PKGBUILDDIR>>/packages/zoltan/src/par -I/<<PKGBUILDDIR>>/packages/zoltan/src/params -I/<<PKGBUILDDIR>>/packages/zoltan/src/tpls -I/<<PKGBUILDDIR>>/packages/zoltan/src/phg -I/<<PKGBUILDDIR>>/packages/zoltan/src/rcb -I/<<PKGBUILDDIR>>/packages/zoltan/src/reftree -I/<<PKGBUILDDIR>>/packages/zoltan/src/simple -I/<<PKGBUILDDIR>>/packages/zoltan/src/timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Communication -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/DDirectory -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/Timer -I/<<PKGBUILDDIR>>/packages/zoltan/src/Utilities/shared -I/<<PKGBUILDDIR>>/packages/zoltan/src/zz -I/usr/include/scotch -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT packages/zoltan/src/CMakeFiles/trilinos_zoltan.dir/zz/zz_util.c.o -MF CMakeFiles/trilinos_zoltan.dir/zz/zz_util.c.o.d -o CMakeFiles/trilinos_zoltan.dir/zz/zz_util.c.o -c /<<PKGBUILDDIR>>/packages/zoltan/src/zz/zz_util.c
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ConditionalBlock.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ConditionalBlock.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ConditionalBlock.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ConditionalBlock.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/ConditionalBlock.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ForBlock.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ForBlock.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ForBlock.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ForBlock.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/ForBlock.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Function.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Function.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Function.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Function.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Function.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/IfElseifElseBlock.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/IfElseifElseBlock.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/IfElseifElseBlock.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/IfElseifElseBlock.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/IfElseifElseBlock.C
[ 12%] Linking C shared library libtrilinos_zoltan.so
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinos_zoltan.dir/link.txt --verbose=1
/usr/bin/mpicc -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libtrilinos_zoltan.so.13.2 -o libtrilinos_zoltan.so.13.2 CMakeFiles/trilinos_zoltan.dir/all/all_allo.c.o CMakeFiles/trilinos_zoltan.dir/coloring/coloring.c.o CMakeFiles/trilinos_zoltan.dir/coloring/color_test.c.o CMakeFiles/trilinos_zoltan.dir/coloring/g2l_hash.c.o CMakeFiles/trilinos_zoltan.dir/coloring/bucket.c.o CMakeFiles/trilinos_zoltan.dir/graph/graph.c.o CMakeFiles/trilinos_zoltan.dir/ha/divide_machine.c.o CMakeFiles/trilinos_zoltan.dir/ha/get_processor_name.c.o CMakeFiles/trilinos_zoltan.dir/ha/ha_ovis.c.o CMakeFiles/trilinos_zoltan.dir/hier/hier.c.o CMakeFiles/trilinos_zoltan.dir/hier/hier_free_struct.c.o CMakeFiles/trilinos_zoltan.dir/hsfc/hsfc_box_assign.c.o CMakeFiles/trilinos_zoltan.dir/hsfc/hsfc.c.o CMakeFiles/trilinos_zoltan.dir/hsfc/hsfc_hilbert.c.o CMakeFiles/trilinos_zoltan.dir/hsfc/hsfc_point_assign.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_balance.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_box_assign.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_copy.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_eval.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_free.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_init.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_invert.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_migrate.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_part2proc.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_point_assign.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_remap.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_set_fn.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_set_method.c.o CMakeFiles/trilinos_zoltan.dir/lb/lb_set_part_sizes.c.o CMakeFiles/trilinos_zoltan.dir/matrix/matrix_build.c.o CMakeFiles/trilinos_zoltan.dir/matrix/matrix_distribute.c.o CMakeFiles/trilinos_zoltan.dir/matrix/matrix_operations.c.o CMakeFiles/trilinos_zoltan.dir/matrix/matrix_sym.c.o CMakeFiles/trilinos_zoltan.dir/matrix/matrix_utils.c.o CMakeFiles/trilinos_zoltan.dir/order/hsfcOrder.c.o CMakeFiles/trilinos_zoltan.dir/order/order.c.o CMakeFiles/trilinos_zoltan.dir/order/order_struct.c.o CMakeFiles/trilinos_zoltan.dir/order/order_tools.c.o CMakeFiles/trilinos_zoltan.dir/order/perm.c.o CMakeFiles/trilinos_zoltan.dir/par/par_average.c.o CMakeFiles/trilinos_zoltan.dir/par/par_bisect.c.o CMakeFiles/trilinos_zoltan.dir/par/par_median.c.o CMakeFiles/trilinos_zoltan.dir/par/par_median_randomized.c.o CMakeFiles/trilinos_zoltan.dir/par/par_stats.c.o CMakeFiles/trilinos_zoltan.dir/par/par_sync.c.o CMakeFiles/trilinos_zoltan.dir/par/par_tflops_special.c.o CMakeFiles/trilinos_zoltan.dir/params/assign_param_vals.c.o CMakeFiles/trilinos_zoltan.dir/params/bind_param.c.o CMakeFiles/trilinos_zoltan.dir/params/check_param.c.o CMakeFiles/trilinos_zoltan.dir/params/free_params.c.o CMakeFiles/trilinos_zoltan.dir/params/key_params.c.o CMakeFiles/trilinos_zoltan.dir/params/print_params.c.o CMakeFiles/trilinos_zoltan.dir/params/set_param.c.o CMakeFiles/trilinos_zoltan.dir/tpls/build_graph.c.o CMakeFiles/trilinos_zoltan.dir/tpls/postprocessing.c.o CMakeFiles/trilinos_zoltan.dir/tpls/preprocessing.c.o CMakeFiles/trilinos_zoltan.dir/tpls/scatter_graph.c.o CMakeFiles/trilinos_zoltan.dir/tpls/third_library.c.o CMakeFiles/trilinos_zoltan.dir/tpls/verify_graph.c.o CMakeFiles/trilinos_zoltan.dir/tpls/scotch_interface.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_build.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_build_calls.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_lookup.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_verbose.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_coarse.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_comm.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_distrib.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_gather.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_hypergraph.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_match.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_order.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_parkway.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_patoh.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_plot.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_rdivide.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_refinement.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_scale.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_serialpartition.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_tree.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_partition_tree.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_two_ways.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_util.c.o CMakeFiles/trilinos_zoltan.dir/phg/phg_Vcycle.c.o CMakeFiles/trilinos_zoltan.dir/rcb/box_assign.c.o CMakeFiles/trilinos_zoltan.dir/rcb/create_proc_list.c.o CMakeFiles/trilinos_zoltan.dir/rcb/inertial1d.c.o CMakeFiles/trilinos_zoltan.dir/rcb/inertial2d.c.o CMakeFiles/trilinos_zoltan.dir/rcb/inertial3d.c.o CMakeFiles/trilinos_zoltan.dir/rcb/point_assign.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rcb_box.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rcb_partition_tree.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rcb.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rcb_util.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rib.c.o CMakeFiles/trilinos_zoltan.dir/rcb/rib_util.c.o CMakeFiles/trilinos_zoltan.dir/rcb/shared.c.o CMakeFiles/trilinos_zoltan.dir/reftree/reftree_build.c.o CMakeFiles/trilinos_zoltan.dir/reftree/reftree_coarse_path.c.o CMakeFiles/trilinos_zoltan.dir/reftree/reftree_hash.c.o CMakeFiles/trilinos_zoltan.dir/reftree/reftree_part.c.o CMakeFiles/trilinos_zoltan.dir/simple/block.c.o CMakeFiles/trilinos_zoltan.dir/simple/cyclic.c.o CMakeFiles/trilinos_zoltan.dir/simple/random.c.o CMakeFiles/trilinos_zoltan.dir/timer/timer_params.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_exchange_sizes.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_invert_map.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_do.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_do_reverse.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_info.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_create.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_resize.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_sort_ints.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_destroy.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Communication/comm_invert_plan.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Timer/zoltan_timer.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Timer/timer.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Find.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Destroy.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Set_Neighbor_Hash_Fn3.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Remove.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Create.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Update.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Stats.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Hash2.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Memory.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Print.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Set_Neighbor_Hash_Fn2.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Set_Hash_Fn.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/DDirectory/DD_Set_Neighbor_Hash_Fn1.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/Memory/mem.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/shared/zoltan_align.c.o CMakeFiles/trilinos_zoltan.dir/Utilities/shared/zoltan_id.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_coord.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_gen_files.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_hash.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_map.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_heap.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_init.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_obj_list.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_rand.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_set_fn.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_sort.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_struct.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_back_trace.c.o CMakeFiles/trilinos_zoltan.dir/zz/zz_util.c.o -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libscotcherr.so
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/zoltan/src && /usr/bin/cmake -E cmake_symlink_library libtrilinos_zoltan.so.13.2 libtrilinos_zoltan.so.13.2 libtrilinos_zoltan.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 12%] Built target trilinos_zoltan
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Line.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Line.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Line.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Line.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Line.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/NormalBlock.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/NormalBlock.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/NormalBlock.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/NormalBlock.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/NormalBlock.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Operator.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Operator.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Operator.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Operator.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Operator.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Registrar.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Registrar.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Registrar.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Registrar.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Registrar.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Tokenizer.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Tokenizer.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Tokenizer.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Tokenizer.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/Tokenizer.C
[ 12%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/WhileBlock.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/WhileBlock.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/WhileBlock.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/WhileBlock.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/WhileBlock.C
[ 13%] Building CXX object packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/common.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/mpicxx -Dtrilinos_pamgen_EXPORTS -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu -I/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/src -I/<<PKGBUILDDIR>>/packages/pamgen/mesh_spec_lt -I/<<PKGBUILDDIR>>/packages/pamgen/extra_functions -I/<<PKGBUILDDIR>>/packages/pamgen/rtcompiler -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++14 -MD -MT packages/pamgen/src/CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/common.C.o -MF CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/common.C.o.d -o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/common.C.o -c /<<PKGBUILDDIR>>/packages/pamgen/rtcompiler/common.C
[ 13%] Linking CXX shared library libtrilinos_pamgen.so
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinos_pamgen.dir/link.txt --verbose=1
/usr/bin/mpicxx -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libtrilinos_pamgen.so.13.2 -o libtrilinos_pamgen.so.13.2 CMakeFiles/trilinos_pamgen.dir/brick_inline_mesh_desc.C.o CMakeFiles/trilinos_pamgen.dir/calc_decomp_cuts.C.o CMakeFiles/trilinos_pamgen.dir/create_inline_mesh.C.o CMakeFiles/trilinos_pamgen.dir/element_density_function.C.o CMakeFiles/trilinos_pamgen.dir/geometry_transform.C.o CMakeFiles/trilinos_pamgen.dir/inline_mesh_desc.C.o CMakeFiles/trilinos_pamgen.dir/inline_mesh_driver_lt.C.o CMakeFiles/trilinos_pamgen.dir/legacy_inline_mesh_desc.C.o CMakeFiles/trilinos_pamgen.dir/parse_routines.C.o CMakeFiles/trilinos_pamgen.dir/radial_inline_mesh_desc.C.o CMakeFiles/trilinos_pamgen.dir/radial_trisection_inline_mesh_desc.C.o CMakeFiles/trilinos_pamgen.dir/uns_inline_decomp.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/InputBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/lexer.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/parse_table.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/parser.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/token.C.o CMakeFiles/trilinos_pamgen.dir/__/parser/token_stream.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ex_c_interface.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ex_c_interface_l.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/im_ne_c_interface_l.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_mesh_specification.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_fudges.C.o CMakeFiles/trilinos_pamgen.dir/__/mesh_spec_lt/pamgen_element_dictionary.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Bessel_I.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Block.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ConditionalBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/ForBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Function.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/IfElseifElseBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Line.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/NormalBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Operator.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Registrar.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/Tokenizer.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/WhileBlock.C.o CMakeFiles/trilinos_pamgen.dir/__/rtcompiler/common.C.o
cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/packages/pamgen/src && /usr/bin/cmake -E cmake_symlink_library libtrilinos_pamgen.so.13.2 libtrilinos_pamgen.so.13.2 libtrilinos_pamgen.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
[ 13%] Built target trilinos_pamgen
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
make[1]: *** [Makefile:169: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:69: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
More information about the debian-science-maintainers
mailing list