Bug#1088789: adios2: FTBFS with HDF5 1.14: dh_missing: warning: usr/lib/x86_64-linux-gnu/libadios2_h5vol.so exists in install-serial but is not installed to anywhere

[Gilles Filippini]

Source: adios2
Version: 2.10.1+dfsg1-13
Severity: important
Tags: ftbfs patch

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Hi,

During a test rebuild with HDF5 1.14 currently in experimental adios2 FTBFS with:

dh_missing: warning: usr/lib/x86_64-linux-gnu/libadios2_h5vol.so exists in install-serial but is not installed to anywhere 
dh_missing: error: missing files, aborting


I propose to temporarily workaround this by disabling HDF5_VOL. Patch attached.

Best,
_g.

- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)

Kernel: Linux 6.1.0-26-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

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-------------- next part --------------
diff -Nru adios2-2.10.1+dfsg1/debian/changelog adios2-2.10.1+dfsg1/debian/changelog
--- adios2-2.10.1+dfsg1/debian/changelog	2024-12-01 02:00:25.000000000 +0100
+++ adios2-2.10.1+dfsg1/debian/changelog	2024-12-01 14:36:06.000000000 +0100
@@ -1,3 +1,10 @@
+adios2 (2.10.1+dfsg1-13.1) UNRELEASED; urgency=medium
+
+  * Non-maintainer upload.
+  * Disable HDF5_VOL to workaround FTBFS with HDF5 1.14
+
+ -- Gilles Filippini <pini at debian.org>  Sun, 01 Dec 2024 14:36:06 +0100
+
 adios2 (2.10.1+dfsg1-13) unstable; urgency=medium
 
   * Team upload.
diff -Nru adios2-2.10.1+dfsg1/debian/rules adios2-2.10.1+dfsg1/debian/rules
--- adios2-2.10.1+dfsg1/debian/rules	2024-12-01 02:00:25.000000000 +0100
+++ adios2-2.10.1+dfsg1/debian/rules	2024-12-01 14:36:06.000000000 +0100
@@ -49,6 +49,7 @@
   -DADIOS2_USE_Blosc:BOOL=ON \
   -DADIOS2_USE_Fortran:BOOL=ON \
   -DADIOS2_USE_HDF5:BOOL=ON \
+  -DADIOS2_USE_HDF5_VOL:BOOL=OFF \
   -DADIOS2_USE_PNG:BOOL=ON \
   -DADIOS2_USE_SST:BOOL=ON \
   -DADIOS2_USE_ZeroMQ:BOOL=ON \