Bug#1059842: FTBFS: test fails: ZFP lib not compiled with -DBIT_STREAM_WORD_TYPE=uint8
Drew Parsons
dparsons at debian.org
Tue Jan 2 10:27:33 GMT 2024
Package: python3-hdf5plugin
Version: 4.0.1-3
Severity: serious
Justification: FTBFS
python3-hdf5plugin has started failing testZfp,
causing both FTBFS and debci failure.
The error message from debci is
56s ERROR: testZfp (__main__.TestHDF5PluginRW.testZfp) (options={'lossless': False}, dtype=<class 'numpy.float32'>)
56s Write/read test with zfp filter plugin
56s ----------------------------------------------------------------------
56s Traceback (most recent call last):
56s File "/usr/lib/python3/dist-packages/hdf5plugin/test.py", line 245, in testZfp
56s self._test('zfp', dtype=dtype, **options)
56s File "/usr/lib/python3/dist-packages/hdf5plugin/test.py", line 86, in _test
56s f.create_dataset("data", data=data, chunks=data.shape, **args)
56s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/group.py", line 183, in create_dataset
56s dsid = dataset.make_new_dset(group, shape, dtype, data, name, **kwds)
56s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
56s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/_hl/dataset.py", line 163, in make_new_dset
56s dset_id = h5d.create(parent.id, name, tid, sid, dcpl=dcpl, dapl=dapl)
56s ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
56s File "h5py/_debian_h5py_serial/_objects.pyx", line 54, in h5py._debian_h5py_serial._objects.with_phil.wrapper
56s File "h5py/_debian_h5py_serial/_objects.pyx", line 55, in h5py._debian_h5py_serial._objects.with_phil.wrapper
56s File "h5py/_debian_h5py_serial/h5d.pyx", line 138, in h5py._debian_h5py_serial.h5d.create
56s ValueError: Unable to create dataset (ZFP lib not compiled with -DBIT_STREAM_WORD_TYPE=uint8)
There is a "BIT_STREAM_WORD_TYPE uint8" build definition in
setup.py. Sounds like it might not have been activated but is needed.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable-debug
APT policy: (500, 'unstable-debug'), (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.6.8-amd64 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages python3-hdf5plugin depends on:
ii python3 3.11.6-1
ii python3-h5py 3.9.0-5
Versions of packages python3-hdf5plugin recommends:
ii hdf5-filter-plugin [hdf5-filter-plugin-lz4-seria 0.0~git20221111.49e3b65-4
l]
ii hdf5-filter-plugin-blosc-serial 0.0~git20220616.9683f7d-5
pn hdf5-filter-plugin-bz2-serial <none>
ii hdf5-filter-plugin-zfp-serial 1.1.0+git20221021-4
ii hdf5-plugin-lzf 3.9.0-5
python3-hdf5plugin suggests no packages.
-- no debconf information
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