Bug#1065270: Unable to open VTK file with appended data that were fine with previous versions (invalid token in vtkXMLDataParser)
Giuseppe Bilotta
giuseppe.bilotta at gmail.com
Sat Mar 2 10:27:13 GMT 2024
Package: paraview
Version: 5.11.2+dfsg-6+b1
Severity: important
Per the title, after a recent upgrade opening any data file with
appended data in 'raw' format, which was possible before the update,
fails with errors like:
vtkXMLDataParser (0x56138248c210): Error parsing XML in stream at line 27, column 1, byte index 1348: not well-formed (invalid token)
This may be an issue with the system expat library, at least according
to the thread
https://discourse.paraview.org/t/i-cannot-read-a-vtp-file-i-could-open-yesterday-can-someone-try-to-open-it/13938
where the same issue is being discussed for an Arch installation.
As reported there, downgrading libexpat1 to 2.5.0-2+b2 seems to fix the
issue, so it's either an issue in expat or in the way ParaView is using
it (maybe some changed default about the strictness off the parsing?).
-- System Information:
Debian Release: trixie/sid
APT prefers unstable-debug
APT policy: (500, 'unstable-debug'), (500, 'testing-debug'), (500, 'unstable'), (500, 'testing'), (500, 'stable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.6.15-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages paraview depends on:
ii libadios2-mpi-c++11-2 2.9.2+dfsg1-13
ii libavcodec60 10:6.1.1-dmo1
ii libavformat60 10:6.1.1-dmo1
ii libavutil58 10:6.1.1-dmo1
ii libc6 2.37-15
ii libdouble-conversion3 3.3.0-1+b1
ii libexpat1 2.6.0-1
ii libfreetype6 2.13.2+dfsg-1+b1
ii libgcc-s1 14-20240201-3
ii libgdal34 3.8.4+dfsg-1
ii libgl2ps1.4 1.4.2+dfsg1-2
ii libglew2.2 2.2.0-4+b1
ii libglx0 1.7.0-1
ii libgmsh4.12 4.12.1+ds1-1
ii libhdf5-openmpi-103-1 1.10.10+repack-3+b1
ii libjpeg62-turbo 1:2.1.5-2+b2
ii liblz4-1 1.9.4-1+b2
ii liblzma5 5.4.5-0.3
ii libnetcdf19 1:4.9.2-3+b1
ii libogg0 1.3.5-3
ii libopengl0 1.7.0-1
ii libopenmpi3 4.1.6-5
ii libpng16-16 1.6.42-1
ii libpython3.11 3.11.8-1
ii libpython3.12 3.12.2-1
ii libqt5core5a 5.15.10+dfsg-7
ii libqt5gui5 5.15.10+dfsg-7
ii libqt5help5 5.15.10-6
ii libqt5network5 5.15.10+dfsg-7
ii libqt5opengl5 5.15.10+dfsg-7
ii libqt5widgets5 5.15.10+dfsg-7
ii libstdc++6 14-20240201-3
ii libswscale7 10:6.1.1-dmo1
ii libtheora0 1.1.1+dfsg.1-16.1+b1
ii libtiff6 4.5.1+git230720-4
ii libx11-6 2:1.8.7-1
ii libxcursor1 1:1.2.1-1
ii libxml2 2.9.14+dfsg-1.3+b2
ii python3-matplotlib 3.6.3-1+b2
ii python3-mpi4py 3.1.5-5
ii tcl [tclsh] 8.6.13+b1
ii zlib1g 1:1.3.dfsg-3+b1
Versions of packages paraview recommends:
ii mpi-default-bin 1.15
ii paraview-doc 5.11.2+dfsg-6
ii python3-paraview 5.11.2+dfsg-6+b1
Versions of packages paraview suggests:
pn h5utils <none>
ii hdf5-tools 1.10.10+repack-3+b1
-- no debconf information
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