Bug#1103223: cdo: FTBFS: configure: error: Could not link to magics library
Santiago Vila
sanvila at debian.org
Tue Apr 15 02:22:16 BST 2025
Package: src:cdo
Version: 2.5.1-1
Severity: serious
Tags: ftbfs trixie sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --builddirectory=debian/build --with fortran_mod
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean || echo "distclean ok"
rm -rf debian/build
if test -f libcdi/src/cfortran.h.orig ; then ( rm libcdi/src/cfortran.h; mv libcdi/src/cfortran.h.orig libcdi/src/cfortran.h); fi
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--builddirectory=debian/build
dh_clean -O--builddirectory=debian/build
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/cdo.substvars debian/libcdi0.substvars debian/libcdi-dev.substvars debian/files
rm -fr -- debian/cdo/ debian/tmp/ debian/libcdi0/ debian/libcdi-dev/
[... snipped ...]
ac_cv_env_DCE_UUID_C_LIB_set=
ac_cv_env_DCE_UUID_C_LIB_value=
ac_cv_env_F77_set=
ac_cv_env_F77_value=
ac_cv_env_FFLAGS_set=set
ac_cv_env_FFLAGS_value='-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -fcf-protection'
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-Wl,-z,relro -Wl,-z,now -Wl,--as-needed'
ac_cv_env_LIBS_set=set
ac_cv_env_LIBS_value='-lm -ljpeg -lz -lcurl'
ac_cv_env_LT_SYS_LIBRARY_PATH_set=
ac_cv_env_LT_SYS_LIBRARY_PATH_value=
ac_cv_env_OSSP_UUID_C_INCLUDE_set=
ac_cv_env_OSSP_UUID_C_INCLUDE_value=
ac_cv_env_OSSP_UUID_C_LIB_set=
ac_cv_env_OSSP_UUID_C_LIB_value=
ac_cv_env_PYTHON_set=
ac_cv_env_PYTHON_value=
ac_cv_env_UTIL_LINUX_UUID_C_INCLUDE_set=
ac_cv_env_UTIL_LINUX_UUID_C_INCLUDE_value=
ac_cv_env_UTIL_LINUX_UUID_C_LIB_set=
ac_cv_env_UTIL_LINUX_UUID_C_LIB_value=
ac_cv_env_build_alias_set=set
ac_cv_env_build_alias_value=x86_64-linux-gnu
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_func_backtrace=yes
ac_cv_func_getpagesize=yes
ac_cv_func_getrlimit=yes
ac_cv_func_mallinfo=yes
ac_cv_func_mmap_fixed_mapped=yes
ac_cv_header_curl_curl_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_fftw3_h=yes
ac_cv_header_grib_api_h=yes
ac_cv_header_hdf5_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_magics_api_h=yes
ac_cv_header_netcdf_h=yes
ac_cv_header_netcdf_meta_h=yes
ac_cv_header_proj_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdio_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_szlib_h=yes
ac_cv_header_udunits2_h=yes
ac_cv_header_udunits2_udunits2_h=no
ac_cv_header_unistd_h=yes
ac_cv_host=x86_64-pc-linux-gnu
ac_cv_member_fenv_t___control=no
ac_cv_member_fenv_t___mxcsr=yes
ac_cv_member_struct_stat_st_blksize=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_EGREP_TRADITIONAL='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_PYTHON=/usr/bin/python3
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_ac_pt_BASH=/bin/bash
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_lt_DD=/usr/bin/dd
ac_cv_path_mkdir=/usr/bin/mkdir
ac_cv_prog_AWK=mawk
ac_cv_prog_CPP=cpp
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_FILECMD=file
ac_cv_prog_NC_CONFIG=/usr/bin/nc-config
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_AS=as
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CPP=cpp
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_DLLTOOL=false
ac_cv_prog_ac_ct_F77=f77
ac_cv_prog_ac_ct_LD='/usr/bin/ld -m elf_x86_64'
ac_cv_prog_ac_ct_NM='/usr/bin/nm -B'
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=-fopenmp
ac_cv_prog_cc_c11=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_stdc=
ac_cv_prog_cxx_cxx11=
ac_cv_prog_cxx_g=yes
ac_cv_prog_cxx_stdcxx=
ac_cv_prog_f77_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_search_H5DSis_scale=-lhdf5_hl
ac_cv_search_H5Fopen=-lhdf5
ac_cv_search_H5TS_mutex_lock='none required'
ac_cv_search_H5dont_atexit='none required'
ac_cv_search_SZ_BufftoBuffCompress=-lsz
ac_cv_search_curl_global_init='none required'
ac_cv_search_fftw_cleanup=-lfftw3
ac_cv_search_grib_get_message=-leccodes
ac_cv_search_mag_open=no
ac_cv_search_nc_open=-lnetcdf
ac_cv_search_proj_create=-lproj
ac_cv_search_ut_parse=-ludunits2
ac_cv_sys_largefile_opts='none needed'
acx_cv_cf_flag='gFortran (user-specified)'
acx_cv_cfortran_works=yes
am_cv_CC_dependencies_compiler_type=none
am_cv_CXX_dependencies_compiler_type=none
am_cv_ar_interface=ar
am_cv_filesystem_timestamp_resolution=0.01
am_cv_make_support_nested_variables=yes
am_cv_pathless_PYTHON=python3
am_cv_prog_cc_c_o=yes
am_cv_python_platform=linux
am_cv_python_pyexecdir='${PYTHON_EXEC_PREFIX}/lib/python3.13/site-packages'
am_cv_python_pythondir='${PYTHON_PREFIX}/lib/python3.13/site-packages'
am_cv_python_version=3.13
am_cv_sleep_fractional_seconds=yes
am_cv_xargs_n_works=yes
ax_cv_PTHREAD_CLANG=no
ax_cv_PTHREAD_JOINABLE_ATTR=PTHREAD_CREATE_JOINABLE
ax_cv_PTHREAD_PRIO_INHERIT=yes
ax_cv_PTHREAD_SPECIAL_FLAGS=no
ax_cv_cxx_compile_cxx20=no
ax_cv_cxx_compile_cxx20__std_gnupp20=yes
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64'
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_manifest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC'
lt_cv_prog_compiler_pic_F77=-fPIC
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_CXX=yes
lt_cv_prog_compiler_static_works_F77=yes
lt_cv_prog_gnu_ld=yes
lt_cv_prog_gnu_ldcxx=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_shlibpath_overrides_runpath=yes
lt_cv_sys_global_symbol_pipe='/usr/bin/sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | /usr/bin/sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='/usr/bin/sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='/usr/bin/sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_global_symbol_to_import=
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop
lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1'
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} '\''/<<PKGBUILDDIR>>/config/missing'\'' aclocal-1.17'
AMDEPBACKSLASH=''
AMDEP_FALSE=''
AMDEP_TRUE='#'
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_CPPFLAGS=''
AM_DEFAULT_V=''
AM_DEFAULT_VERBOSITY='1'
AM_V=''
AR='ar'
AS='as'
AUTOCONF='${SHELL} '\''/<<PKGBUILDDIR>>/config/missing'\'' autoconf'
AUTOHEADER='${SHELL} '\''/<<PKGBUILDDIR>>/config/missing'\'' autoheader'
AUTOMAKE='${SHELL} '\''/<<PKGBUILDDIR>>/config/missing'\'' automake-1.17'
AWK='mawk'
BASH='/bin/bash'
CC='gcc'
CCDEPMODE='depmode=none'
CFLAGS='-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fPIC -fopenmp -pthread'
CLDFLAGS=''
CLIBS=''
CMOR_LIBS=''
CPP='cpp'
CPPFLAGS='-I/usr/include/magics -I/usr/include -I/usr/include -I/usr/include -I/usr/include -I/usr/lib/x86_64-linux-gnu/hdf5/serial/include -Wdate-time -D_FORTIFY_SOURCE=2 -DgFortran -I/usr/include/cdTime -I/usr/include -I/usr/include/udunits2'
CSCOPE='cscope'
CTAGS='ctags'
CURL_INCLUDE=' -I/usr/include'
CURL_LDFLAGS=' -L/usr/lib -lcurl'
CXX='g++ -std=gnu++20'
CXXCPP='g++ -E -std=gnu++20'
CXXDEPMODE='depmode=none'
CXXFLAGS='-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -pthread'
CYGPATH_W='echo'
DCE_UUIDROOT=''
DCE_UUID_C_INCLUDE=''
DCE_UUID_C_LIB=''
DEFS=''
DEPDIR='.deps'
DLLTOOL='false'
DSYMUTIL=''
DUMPBIN=''
ECCODES_INCLUDE=' -I/usr/include'
ECCODES_LIBS=' -L/usr/lib -leccodes'
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/usr/bin/grep -E'
ENABLE_ACROSS=''
ENABLE_ALL_STATIC_FALSE=''
ENABLE_ALL_STATIC_TRUE=''
ENABLE_CDI_APP_FALSE=''
ENABLE_CDI_APP_TRUE=''
ENABLE_CDI_LIB=''
ENABLE_CDI_LIB_FALSE=''
ENABLE_CDI_LIB_TRUE=''
ENABLE_CGRIBEX='no'
ENABLE_EXTRA='yes'
ENABLE_FORTRAN='true'
ENABLE_GRIB='yes'
ENABLE_GRIBAPI='yes'
ENABLE_HIRLAM_EXTENSIONS_FALSE=''
ENABLE_HIRLAM_EXTENSIONS_TRUE=''
ENABLE_IEG='yes'
ENABLE_MAGICS_FALSE=''
ENABLE_MAGICS_TRUE=''
ENABLE_NC2='yes'
ENABLE_NC4='yes'
ENABLE_NC4HDF5='yes'
ENABLE_NC4SZLIB=''
ENABLE_NETCDF='yes'
ENABLE_SERVICE='yes'
ENABLE_THREADS='yes'
ETAGS='etags'
EXEEXT=''
F77='f77'
FDB5_INCLUDE=''
FDB5_LIBS=''
FFLAGS='-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -fcf-protection'
FGREP='/usr/bin/grep -F'
FILECMD='file'
FORTRAN_WORKS='yes'
GREP='/usr/bin/grep'
HAVE_CXX20='1'
HAVE_LIBGRIB_API_FALSE=''
HAVE_LIBGRIB_API_TRUE=''
HAVE_PYTHON_FALSE='#'
HAVE_PYTHON_TRUE=''
HDF5_INCLUDE=' -I/usr/lib/x86_64-linux-gnu/hdf5/serial/include'
HDF5_LIBS=' -L/usr/lib/x86_64-linux-gnu/hdf5/serial/lib -lhdf5'
HDF5_ROOT='/usr/lib/x86_64-linux-gnu/hdf5/serial'
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/bin/ld -m elf_x86_64'
LDFLAGS='-L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial/lib -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -L/usr/lib'
LIBOBJS=''
LIBS='-lproj -lfftw3 -leccodes -ludunits2 -lnetcdf -lhdf5_hl -lhdf5 -lsz -lpthread -lm -ljpeg -lz -lcurl'
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LN_S='ln -s'
LTLIBOBJS=''
LT_SYS_LIBRARY_PATH=''
MAGICS_INCLUDE=''
MAGICS_LIBS=''
MAGICS_ROOT='/usr'
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} '\''/<<PKGBUILDDIR>>/config/missing'\'' makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/usr/bin/mkdir -p'
NC_CONFIG='/usr/bin/nc-config'
NETCDF_INCLUDE=' -I/usr/include'
NETCDF_LIBS=' -L/usr/lib -lnetcdf'
NETCDF_ROOT='/usr'
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJEXT='o'
OPENMP_CFLAGS='-fopenmp'
OSSP_UUIDROOT=''
OSSP_UUID_C_INCLUDE=''
OSSP_UUID_C_LIB=''
OTOOL64=''
OTOOL=''
PACKAGE='cdo'
PACKAGE_BUGREPORT='https://mpimet.mpg.de/cdo'
PACKAGE_NAME='cdo'
PACKAGE_STRING='cdo 2.5.1'
PACKAGE_TARNAME='cdo'
PACKAGE_URL=''
PACKAGE_VERSION='2.5.1'
PATH_SEPARATOR=':'
PROJ_INCLUDE=' -I/usr/include'
PROJ_LDFLAGS=' -L/usr/lib -lproj'
PTHREAD_CC='gcc'
PTHREAD_CFLAGS='-pthread'
PTHREAD_LIBS='-lpthread'
PYTHON='/usr/bin/python3'
PYTHON_EXEC_PREFIX='${exec_prefix}'
PYTHON_PLATFORM='linux'
PYTHON_PREFIX='${prefix}'
PYTHON_VERSION='3.13'
RANLIB='ranlib'
SED='/usr/bin/sed'
SET_MAKE=''
SHELL='/bin/bash'
STRIP='strip'
SYSTEM_TYPE='x86_64-pc-linux-gnu'
SZLIB_INCLUDE=''
SZLIB_LIBS=' -lsz'
THREADS_INCLUDE=''
THREADS_LIBS=''
UDUNITS_INCLUDE=' -I/usr/include'
UDUNITS_LDFLAGS=' -L/usr/lib -ludunits2'
USE_F77_FALSE='#'
USE_F77_TRUE=''
UTIL_LINUX_UUIDROOT=''
UTIL_LINUX_UUID_C_INCLUDE=''
UTIL_LINUX_UUID_C_LIB=''
UUID_C_INCLUDE=''
UUID_C_LIB=''
VERSION='2.5.1'
XML2_LIBS=''
ac_ct_AR='ar'
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
ac_ct_F77='f77'
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE='#'
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE='#'
am__include='include'
am__isrc=' -I$(srcdir)'
am__leading_dot='.'
am__nodep=''
am__quote=''
am__rm_f_notfound=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
am__xargs_n='xargs -n'
ax_pthread_config=''
bindir='${exec_prefix}/bin'
build='x86_64-pc-linux-gnu'
build_alias='x86_64-linux-gnu'
build_cpu='x86_64'
build_os='linux-gnu'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-pc-linux-gnu'
host_alias=''
host_cpu='x86_64'
host_os='linux-gnu'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${prefix}/share/info'
install_sh='${SHELL} /<<PKGBUILDDIR>>/config/install-sh'
libdir='/usr/lib/x86_64-linux-gnu'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='/var'
mandir='${prefix}/share/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
pkgpyexecdir='${pyexecdir}/cdo'
pkgpythondir='${pythondir}/cdo'
prefix='/usr'
program_transform_name='s,x,x,'
psdir='${docdir}'
pyexecdir='${PYTHON_EXEC_PREFIX}/lib/python3.13/site-packages'
pythondir='${PYTHON_PREFIX}/lib/python3.13/site-packages'
runstatedir='/run'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
subdirs_extra=''
sysconfdir='/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "cdo"
#define PACKAGE_TARNAME "cdo"
#define PACKAGE_VERSION "2.5.1"
#define PACKAGE_STRING "cdo 2.5.1"
#define PACKAGE_BUGREPORT "https://mpimet.mpg.de/cdo"
#define PACKAGE_URL ""
#define CDO "2.5.1"
#define PACKAGE "cdo"
#define VERSION "2.5.1"
#define HAVE_STDIO_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_PARAM_H 1
#define STDC_HEADERS 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define restrict __restrict__
#define HAVE_CXX20 1
#define HAVE_GETPAGESIZE 1
#define HAVE_MMAP 1
#define HAVE_STRUCT_STAT_ST_BLKSIZE 1
#define HAVE_MALLINFO 1
#define HAVE_BACKTRACE 1
#define HAVE_GETRLIMIT 1
#define CXX_VERSION "g++ (Debian 14.2.0-19) 14.2.0"
#define C_VERSION "gcc (Debian 14.2.0-19) 14.2.0"
#define F77_VERSION "GNU Fortran (Debian 14.2.0-19) 14.2.0"
#define SYSTEM_TYPE "x86_64-pc-linux-gnu"
#define HAVE_FENV_T___MXCSR 1
#define HAVE_CF_INTERFACE 1
#define HAVE_PTHREAD_PRIO_INHERIT 1
#define HAVE_LIBPTHREAD 1
#define HAVE_SZLIB_H 1
#define HAVE_LIBSZ 1
#define HAVE_HDF5_H 1
#define HAVE_LIBHDF5 1
#define HAVE_NETCDF_H 1
#define HAVE_NETCDF_META_H 1
#define HAVE_LIBNETCDF 1
#define HAVE_LIBNC_DAP 1
#define HAVE_NETCDF2 1
#define HAVE_NETCDF4 1
#define HAVE_NC4HDF5 1
#define HAVE_NC4HDF5_THREADSAFE 1
#define HAVE_H5DONT_ATEXIT 1
#define HAVE_UDUNITS2_H 1
#define HAVE_LIBUDUNITS2 1
#define HAVE_GRIB_API_H 1
#define HAVE_LIBGRIB_API 1
#define HAVE_LIBGRIB 1
#define HAVE_LIBSERVICE 1
#define HAVE_LIBEXTRA 1
#define HAVE_LIBIEG 1
#define HAVE_FFTW3_H 1
#define HAVE_LIBFFTW3 1
#define HAVE_PROJ_H 1
#define HAVE_LIBPROJ 1
#define HAVE_CURL_CURL_H 1
#define HAVE_LIBCURL 1
#define HAVE_MAGICS_API_H 1
configure: exit 1
dh_auto_configure: error: cd debian/build && ../../configure [too-long-redacted] as-needed" returned exit code 1
make[1]: *** [debian/rules:64: override_dh_auto_configure] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:12: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202504/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:cdo, so that this is still
visible in the BTS web page for this package.
Thanks.
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