Bug#1149282: mshr: FTBFS with boost 1.92
Anton Gladky
gladk at debian.org
Tue Sep 29 06:31:48 BST 2026
Package: src:mshr
Version: 2019.2.0~git20230811.ff54a68+dfsg1-9
Severity: important
Tags: sid forky ftbfs
User: debian-devel at lists.debian.org
Usertags: boost1.92
Dear Maintainer,
Boost 1.92 will most likely be the default boost version in the
upcoming Debian 14 (forky) release.
mshr FTBFS with boost 1.92. Note that the FTBFS may not necessarily be
connected to boost - please check the build log for the actual cause.
boost-defaults pointing to 1.92 is available in experimental, so you can
rebuild your package against it to reproduce the failure and test the fix.
Note: This ticket severity will be increased to RC bug when
boost-defaults is switched to 1.92.
If your package depends on versioned boost packages (e.g. libboost1.90-dev),
please switch to the unversioned (default) ones (e.g. libboost-dev), so the
package follows future boost transitions automatically.
Here is the most probably relevant part of the failing build log:
==================== build log ====================
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
-- The C compiler identification is GNU 16.2.0
-- The CXX compiler identification is GNU 16.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Targeting Unix Makefiles
-- Using /usr/bin/x86_64-linux-gnu-g++ compiler.
-- Boost include dirs: /usr/include
-- Boost libraries:
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Using gcc version 4 or later. Adding -frounding-math
CMake Warning (dev) at /usr/share/cmake-4.3/Modules/FindPackageHandleStandardArgs.cmake:493 (message):
The package name passed to find_package_handle_standard_args() (TETGEN)
does not match the name of the calling package (TetGen). This can lead to
problems in calling code that expects find_package() result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake/FindTetGen.cmake:31 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
CMakeLists.txt:32 (find_package)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found TETGEN: /usr/lib/x86_64-linux-gnu/libtet.so
CMake Warning (dev) at CMakeLists.txt:59 (find_package):
Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake
--help-policy CMP0167" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning at /usr/share/cmake-4.3/Modules/FindBoost.cmake:1459 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-4.3/Modules/FindBoost.cmake:1584 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-4.3/Modules/FindBoost.cmake:2197 (_Boost_MISSING_DEPENDENCIES)
CMakeLists.txt:59 (find_package)
CMake Warning at /usr/share/cmake-4.3/Modules/FindBoost.cmake:1459 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-4.3/Modules/FindBoost.cmake:1584 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-4.3/Modules/FindBoost.cmake:2197 (_Boost_MISSING_DEPENDENCIES)
CMakeLists.txt:59 (find_package)
-- Found Boost: /usr/include (found version "1.92.0") found components: filesystem program_options
-- Found GMP: /usr/lib/x86_64-linux-gnu/libgmp.so
-- Found MPFR: /usr/lib/x86_64-linux-gnu/libmpfr.so
CMake Error at CMakeLists.txt:80 (include_directories):
include_directories given empty-string as include directory.
CMake Warning (dev) at /usr/lib/x86_64-linux-gnu/cmake/dolfin/UseDOLFIN.cmake:34 (find_package):
Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake
--help-policy CMP0167" for policy details. Use the cmake_policy command to
set the policy and suppress this warning.
Call Stack (most recent call first):
CMakeLists.txt:95 (include)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning at /usr/share/cmake-4.3/Modules/FindBoost.cmake:1459 (message):
New Boost version may have incorrect or missing dependencies and imported
targets
Call Stack (most recent call first):
/usr/share/cmake-4.3/Modules/FindBoost.cmake:1584 (_Boost_COMPONENT_DEPENDENCIES)
/usr/share/cmake-4.3/Modules/FindBoost.cmake:2197 (_Boost_MISSING_DEPENDENCIES)
/usr/lib/x86_64-linux-gnu/cmake/dolfin/UseDOLFIN.cmake:34 (find_package)
CMakeLists.txt:95 (include)
-- Found PkgConfig: /usr/bin/x86_64-linux-gnu-pkg-config (found version "2.5.1")
-- Checking for one of the modules 'craypetsc_real;petsc;PETSc'
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of PetscInt
-- Check size of PetscInt - failed
-- Checking for one of the modules 'crayslepc_real;slepc;SLEPc'
-- Testing disabled
-- Configuring incomplete, errors occurred!
cd obj-x86_64-linux-gnu && tail -v -n \+0 CMakeCache.txt
==> CMakeCache.txt <==
# This is the CMakeCache file.
# For build in directory: /build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1/obj-x86_64-linux-gnu
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.
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# EXTERNAL cache entries
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BUILD_SHARED_LIBS:BOOL=ON
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//The directory containing a CMake configuration file for Boost.
Boost_DIR:PATH=/usr/lib/x86_64-linux-gnu/cmake/Boost-1.92.0
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Boost_FILESYSTEM_LIBRARY_DEBUG:FILEPATH=/usr/lib/x86_64-linux-gnu/libboost_filesystem.so
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Boost_FILESYSTEM_LIBRARY_RELEASE:FILEPATH=/usr/lib/x86_64-linux-gnu/libboost_filesystem.so
//Path to a file.
Boost_INCLUDE_DIR:PATH=/usr/include
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CGAL_CMAKE_EXACT_NT_BACKEND:STRING=Default
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CGAL_DEV_MODE:BOOL=OFF
//The directory containing a CMake configuration file for CGAL.
CGAL_DIR:PATH=/usr/lib/x86_64-linux-gnu/cmake/CGAL
//Build the testing tree.
CGAL_ENABLE_TESTING:BOOL=OFF
//Use CGAL in header-only mode
CGAL_HEADER_ONLY:BOOL=ON
//If set, the ctest command will not skip the tests of the draw
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CGAL_TEST_DRAW_FUNCTIONS:BOOL=OFF
//Use CGAL with GMPXX: use C++ classes of GNU MP instead of CGAL
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CGAL_WITH_GMPXX:BOOL=ON
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CMAKE_DLLTOOL:FILEPATH=CMAKE_DLLTOOL-NOTFOUND
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CMAKE_FIND_PACKAGE_REDIRECTS_DIR:STATIC=/build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/pkgRedirects
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CMAKE_FIND_USE_PACKAGE_REGISTRY:UNINITIALIZED=OFF
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CMAKE_INSTALL_LIBDIR:UNINITIALIZED=lib/x86_64-linux-gnu
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CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF
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//Flags used by the linker during the creation of modules during
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CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL:STRING=
//Flags used by the linker during the creation of modules during
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CMAKE_MODULE_LINKER_FLAGS_RELEASE:STRING=
//Flags used by the linker during the creation of modules during
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CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO:STRING=
//Path to a program.
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//Value Computed by CMake
CMAKE_PROJECT_HOMEPAGE_URL:STATIC=
//Value Computed by CMake
CMAKE_PROJECT_NAME:STATIC=MSHR
//Value Computed by CMake
CMAKE_PROJECT_SPDX_LICENSE:STATIC=
//Path to a program.
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//Flags used by the linker during the creation of shared libraries
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//Flags used by the linker during the creation of shared libraries
// during RELEASE builds.
CMAKE_SHARED_LINKER_FLAGS_RELEASE:STRING=
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//Flags used by the archiver during the creation of static libraries
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CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO:STRING=
//Path to a program.
CMAKE_STRIP:FILEPATH=/usr/bin/x86_64-linux-gnu-strip
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CMAKE_TAPI:FILEPATH=CMAKE_TAPI-NOTFOUND
//If this value is on, makefiles will be generated without the
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// during the make. This is useful for debugging only. With Visual
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CMAKE_VERBOSE_MAKEFILE:BOOL=ON
//The directory containing a CMake configuration file for DOLFIN.
DOLFIN_DIR:PATH=/usr/lib/x86_64-linux-gnu/cmake/dolfin
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//Enable building the command line client, mshrable
ENABLE_MSHRABLE:BOOL=ON
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ENABLE_TESTS:BOOL=OFF
//The directory containing a CMake configuration file for Eigen3.
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//No help, variable specified on the command line.
FETCHCONTENT_FULLY_DISCONNECTED:UNINITIALIZED=ON
//The directory containing the GMPXX include files
GMPXX_INCLUDE_DIR:PATH=/usr/include
//Path to the GMPXX library
GMPXX_LIBRARIES:FILEPATH=/usr/lib/x86_64-linux-gnu/libgmpxx.so
//The directory containing the GMP header files
GMP_INCLUDE_DIR:PATH=/usr/include/x86_64-linux-gnu
//Path to the Debug GMP library
GMP_LIBRARY_DEBUG:FILEPATH=/usr/lib/x86_64-linux-gnu/libgmp.so
//Path to the Release GMP library
GMP_LIBRARY_RELEASE:FILEPATH=/usr/lib/x86_64-linux-gnu/libgmp.so
//Use fixed seed for CGAL's pseudo random generator
INIT_CGAL_RANDOM:BOOL=OFF
//Installation directory for executables
INSTALL_BIN_DIR:PATH=bin
//Installation directory for header files
INSTALL_INCLUDE_DIR:PATH=include
//No help, variable specified on the command line.
INSTALL_LIB_DIR:PATH=lib/x86_64-linux-gnu
//Path to a library.
LIB_HYPRE:FILEPATH=/usr/lib/x86_64-linux-gnu/libHYPRE.so
//Path to a library.
LIB_OpenCL:FILEPATH=/usr/lib/x86_64-linux-gnu/libOpenCL.so
//Path to a library.
LIB_X11:FILEPATH=/usr/lib/x86_64-linux-gnu/libX11.so
//Path to a library.
LIB_amd:FILEPATH=/usr/lib/x86_64-linux-gnu/libamd.so
//Path to a library.
LIB_atomic_asneeded:FILEPATH=LIB_atomic_asneeded-NOTFOUND
//Path to a library.
LIB_blas:FILEPATH=/usr/lib/x86_64-linux-gnu/libblas.so
//Path to a library.
LIB_cholmod:FILEPATH=/usr/lib/x86_64-linux-gnu/libcholmod.so
//Path to a library.
LIB_cmumps:FILEPATH=/usr/lib/x86_64-linux-gnu/libcmumps.so
//Path to a library.
LIB_dmumps:FILEPATH=/usr/lib/x86_64-linux-gnu/libdmumps.so
//Path to a library.
LIB_fftw3:FILEPATH=/usr/lib/x86_64-linux-gnu/libfftw3.so
//Path to a library.
LIB_fftw3_mpi:FILEPATH=/usr/lib/x86_64-linux-gnu/libfftw3_mpi.so
//Path to a library.
LIB_gcc_s:FILEPATH=LIB_gcc_s-NOTFOUND
//Path to a library.
LIB_gfortran:FILEPATH=LIB_gfortran-NOTFOUND
//Path to a library.
LIB_hdf5_openmpi:FILEPATH=/usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so
//Path to a library.
LIB_klu:FILEPATH=/usr/lib/x86_64-linux-gnu/libklu.so
//Path to a library.
LIB_lapack:FILEPATH=/usr/lib/x86_64-linux-gnu/liblapack.so
//Path to a library.
LIB_m:FILEPATH=/usr/lib/x86_64-linux-gnu/libm.so
//Path to a library.
LIB_mpi:FILEPATH=/usr/lib/x86_64-linux-gnu/libmpi.so
//Path to a library.
LIB_mpi_mpifh:FILEPATH=/usr/lib/x86_64-linux-gnu/libmpi_mpifh.so
//Path to a library.
LIB_mpi_usempi_ignore_tkr:FILEPATH=/usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr.so
//Path to a library.
LIB_mpi_usempif08:FILEPATH=/usr/lib/x86_64-linux-gnu/libmpi_usempif08.so
//Path to a library.
LIB_mumps_common:FILEPATH=/usr/lib/x86_64-linux-gnu/libmumps_common.so
//Path to a library.
LIB_petsc_real:FILEPATH=/usr/lib/petscdir/petsc3.25/x86_64-linux-gnu-real/lib/libpetsc_real.so
//Path to a library.
LIB_pord:FILEPATH=/usr/lib/x86_64-linux-gnu/libpord.so
//Path to a library.
LIB_ptesmumps:FILEPATH=/usr/lib/x86_64-linux-gnu/libptesmumps.so
//Path to a library.
LIB_ptscotch:FILEPATH=/usr/lib/x86_64-linux-gnu/libptscotch.so
//Path to a library.
LIB_ptscotcherr:FILEPATH=/usr/lib/x86_64-linux-gnu/libptscotcherr.so
//Path to a library.
LIB_quadmath:FILEPATH=LIB_quadmath-NOTFOUND
//Path to a library.
LIB_scalapack-openmpi:FILEPATH=/usr/lib/x86_64-linux-gnu/libscalapack-openmpi.so
//Path to a library.
LIB_scotch:FILEPATH=/usr/lib/x86_64-linux-gnu/libscotch.so
//Path to a library.
LIB_slepc_real:FILEPATH=/usr/lib/slepcdir/slepc3.25/x86_64-linux-gnu-real/lib/libslepc_real.so
//Path to a library.
LIB_smumps:FILEPATH=/usr/lib/x86_64-linux-gnu/libsmumps.so
//Path to a library.
LIB_spqr:FILEPATH=/usr/lib/x86_64-linux-gnu/libspqr.so
//Path to a library.
LIB_stdc++:FILEPATH=LIB_stdc++-NOTFOUND
//Path to a library.
LIB_superlu:FILEPATH=/usr/lib/x86_64-linux-gnu/libsuperlu.so
//Path to a library.
LIB_superlu_dist:FILEPATH=/usr/lib/x86_64-linux-gnu/libsuperlu_dist.so
//Path to a library.
LIB_umfpack:FILEPATH=/usr/lib/x86_64-linux-gnu/libumfpack.so
//Path to a library.
LIB_yaml:FILEPATH=/usr/lib/x86_64-linux-gnu/libyaml.so
//Path to a library.
LIB_zmumps:FILEPATH=/usr/lib/x86_64-linux-gnu/libzmumps.so
//The directory containing the MPFR header files
MPFR_INCLUDE_DIR:PATH=/usr/include
//Path to the MPFR library
MPFR_LIBRARIES:FILEPATH=/usr/lib/x86_64-linux-gnu/libmpfr.so
MPFR_LIBRARIES_DIR:FILEPATH=/usr/lib/x86_64-linux-gnu
//Value Computed by CMake
MSHR_BINARY_DIR:STATIC=/build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1/obj-x86_64-linux-gnu
//Value Computed by CMake
MSHR_IS_TOP_LEVEL:STATIC=ON
//Value Computed by CMake
MSHR_SOURCE_DIR:STATIC=/build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1
//Build with library version information.
MSHR_WITH_LIBRARY_VERSION:BOOL=ON
//No help, variable specified on the command line.
PKGCONFIG_EXECUTABLE:UNINITIALIZED=/usr/bin/x86_64-linux-gnu-pkg-config
//Arguments to supply to pkg-config
PKG_CONFIG_ARGN:STRING=
//pkg-config executable
PKG_CONFIG_EXECUTABLE:FILEPATH=/usr/bin/x86_64-linux-gnu-pkg-config
//Shared data installation directory.
SHARE_DIR:PATH=share/mshr
//The TetGen include directory
TETGEN_INCLUDE_DIR:PATH=/usr/include
//The TetGen library
TETGEN_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libtet.so
//Do not build CGAL, but use an existing build instead.
USE_SYSTEM_CGAL:BOOL=ON
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//Last used Boost_INCLUDE_DIR value.
_Boost_INCLUDE_DIR_LAST:INTERNAL=/usr/include
//Last used Boost_LIBRARY_DIR_DEBUG value.
_Boost_LIBRARY_DIR_DEBUG_LAST:INTERNAL=/usr/lib/x86_64-linux-gnu
//Last used Boost_LIBRARY_DIR_RELEASE value.
_Boost_LIBRARY_DIR_RELEASE_LAST:INTERNAL=/usr/lib/x86_64-linux-gnu
//Last used Boost_NAMESPACE value.
_Boost_NAMESPACE_LAST:INTERNAL=boost
//Last used Boost_USE_MULTITHREADED value.
_Boost_USE_MULTITHREADED_LAST:INTERNAL=TRUE
//Last used Boost_USE_STATIC_LIBS value.
_Boost_USE_STATIC_LIBS_LAST:INTERNAL=OFF
__pkg_config_checked_PETSC:INTERNAL=1
__pkg_config_checked_SLEPC:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_PETSC_petsc_real
pkgcfg_lib_PETSC_petsc_real-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_SLEPC_petsc_real
pkgcfg_lib_SLEPC_petsc_real-ADVANCED:INTERNAL=1
//ADVANCED property for variable: pkgcfg_lib_SLEPC_slepc_real
pkgcfg_lib_SLEPC_slepc_real-ADVANCED:INTERNAL=1
prefix_result:INTERNAL=/usr/lib/slepcdir/slepc3.25/x86_64-linux-gnu-real/lib
dh_auto_configure: error: cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=x86_64-linux-gnu-pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_COMPILER=/usr/bin/x86_64-linux-gnu-gcc -DCMAKE_CXX_COMPILER=/usr/bin/x86_64-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/x86_64-linux-gnu-pkg-config -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=Release -D BUILD_SHARED_LIBS:BOOL=ON -D USE_SYSTEM_CGAL:BOOL=ON -D USE_SYSTEM_TETGEN:BOOL=ON -D ENABLE_MSHRABLE:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_P
ATH:BOOL=OFF -D INSTALL_LIB_DIR:PATH=lib/x86_64-linux-gnu -D "CMAKE_CXX_FLAGS:STRING=-fpermissive -g -O2 -ffile-prefix-map=/build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" /build/reproducible-path/mshr-2019.2.0\~git20230811.ff54a68\+dfsg1/ .. returned exit code 1
make[1]: *** [debian/rules:97: override_dh_auto_configure] Error 2
make[1]: Leaving directory '/build/reproducible-path/mshr-2019.2.0~git20230811.ff54a68+dfsg1'
make: *** [debian/rules:85: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2
==================== end of build log =============
Thanks,
Anton Gladky
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