[Debichem-devel] Bug#569438: avogadro: FTBFS: sip.cpp:143: error: 'const struct sipAPIDef' has no member named 'api_convert_from_instance'

[Lucas Nussbaum]

Source: avogadro
Version: 1.0.0-2
Severity: serious
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20100211 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> make[3]: Entering directory `/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu'
> /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/CMakeFiles 
> [ 76%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/navigate.cpp.o
> cd /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src/python && /usr/bin/g++   -Dpython_module_EXPORTS -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g -O2 -g -Wall -O2 -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -DNDEBUG -DQT_NO_DEBUG_OUTPUT -fPIC -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/include -I/usr/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/include -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0 -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFiles/python-module.dir/navigate.cpp.o -c /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/navigate.cpp
> /usr/bin/cmake -E cmake_progress_report /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/CMakeFiles 
> [ 76%] Building CXX object libavogadro/src/python/CMakeFiles/python-module.dir/sip.cpp.o
> cd /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src/python && /usr/bin/g++   -Dpython_module_EXPORTS -D_BSD_SOURCE -DHAVE_GCC_VISIBILITY -DENABLE_PYTHON -DENABLE_GLSL -DQT_DLL -DQT_OPENGL_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -DQT_NO_DEBUG -g -O2 -g -Wall -O2 -fvisibility=hidden -fvisibility-inlines-hidden -fpermissive -O2 -DNDEBUG -DQT_NO_DEBUG_OUTPUT -fPIC -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/include -I/usr/include/qt4 -I/usr/include/qt4/QtOpenGL -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtNetwork -I/usr/include/qt4/QtCore -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src -I/usr/include/eigen2 -I/usr/include/openbabel-2.0 -I/usr/include/python2.5 -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/include -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0 -I/build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/src/python -I/usr/lib/python2.5/site-packages/numpy/core/include   -o CMakeFiles/python-module.dir/sip.cpp.o -c /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp: In static member function 'static PyObject* QClass_converters<T>::QClass_to_PyQt::convert(const T&)':
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:143: error: 'const struct sipAPIDef' has no member named 'api_convert_from_instance'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp: In static member function 'static PyObject* QClass_converters<T>::QClass_to_PyQt::convert(T*)':
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:167: error: 'const struct sipAPIDef' has no member named 'api_convert_from_instance'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp: In static member function 'static void* QClass_converters<T>::QClass_from_PyQt(PyObject*)':
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:187: error: 'const struct sipAPIDef' has no member named 'api_wrapper_check'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:195: error: 'const struct sipAPIDef' has no member named 'api_transfer'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:205: error: 'struct sipWrapper' has no member named 'u'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp: In static member function 'static PyObject* QList_QAction_to_python_list_PyQt::convert(const QList<QAction*>&)':
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:245: error: 'const struct _sipAPIDef' has no member named 'api_convert_from_instance'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp: In function 'PyObject* toPyQt(T*)':
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/libavogadro/src/python/sip.cpp:383: error: 'const struct sipAPIDef' has no member named 'api_convert_from_instance'
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/include/avogadro/primitive.h: At global scope:
> /build/user-avogadro_1.0.0-2-amd64-5t0Ufq/avogadro-1.0.0/obj-x86_64-linux-gnu/libavogadro/include/avogadro/primitive.h:40: warning: 'Avogadro::FALSE_ID' defined but not used
> make[3]: *** [libavogadro/src/python/CMakeFiles/python-module.dir/sip.cpp.o] Error 1

The full build log is available from:
   http://people.debian.org/~lucas/logs/2010/02/11/avogadro_1.0.0-2_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.

-- 
| Lucas Nussbaum
| lucas at lucas-nussbaum.net   http://www.lucas-nussbaum.net/ |
| jabber: lucas at nussbaum.fr             GPG: 1024D/023B3F4F |