[Debichem-devel] Bug#650112: Fails to start with a segmentation fault

Daniel Leidert daniel.leidert.spam at gmx.net
Sat Nov 26 17:03:36 UTC 2011


Package: chemtool
Version: 1.6.12-2
Severity: grave

Chemtool crashes at startup. Backtrace attached.

-- System Information:
Debian Release: wheezy/sid
  APT prefers unstable
  APT policy: (850, 'unstable'), (700, 'testing'), (560, 'stable'), (110, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 3.1.0-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages chemtool depends on:
ii  libatk1.0-0         2.2.0-2    
ii  libc6               2.13-21    
ii  libcairo2           1.10.2-6.1 
ii  libfontconfig1      2.8.0-3    
ii  libfreetype6        2.4.8-1    
ii  libgdk-pixbuf2.0-0  2.24.0-1   
ii  libglib2.0-0        2.30.2-4   
ii  libgtk2.0-0         2.24.8-2   
ii  libpango1.0-0       1.29.4-2   
ii  libx11-6            2:1.4.4-4  
ii  transfig            1:3.2.5.d-1

Versions of packages chemtool recommends:
ii  openbabel  2.3.1+dfsg-2+b1

Versions of packages chemtool suggests:
pn  fig2sxd  <none>
pn  xfig     <none>

-- no debconf information
-------------- next part --------------
Starting program: /usr/bin/chemtool 
[Thread debugging using libthread_db enabled]

Program received signal SIGSEGV, Segmentation fault.
__strlen_sse2 () at ../sysdeps/x86_64/multiarch/../strlen.S:32
32	../sysdeps/x86_64/multiarch/../strlen.S: Datei oder Verzeichnis nicht gefunden.
	in ../sysdeps/x86_64/multiarch/../strlen.S
#0  __strlen_sse2 () at ../sysdeps/x86_64/multiarch/../strlen.S:32
No locals.
#1  0x00007fffeaf00b70 in ?? () from /usr/lib/x86_64-linux-gnu/gdk-pixbuf-2.0/2.10.0/loaders/libpixbufloader-xpm.so
No symbol table info available.
#2  0x00007fffeaf0117e in ?? () from /usr/lib/x86_64-linux-gnu/gdk-pixbuf-2.0/2.10.0/loaders/libpixbufloader-xpm.so
No symbol table info available.
#3  0x00007ffff52e389e in gdk_pixbuf_new_from_xpm_data () from /usr/lib/x86_64-linux-gnu/libgdk_pixbuf-2.0.so.0
No symbol table info available.
#4  0x00007ffff751b33b in IA__gdk_pixmap_colormap_create_from_xpm_d (drawable=0x6c5900, colormap=0x6c4040, mask=0x6869e0, 
    transparent_color=0x733b44, data=<optimized out>) at /tmp/buildd/gtk+2.0-2.24.8/gdk/gdkpixmap.c:798
        pixbuf = <optimized out>
        pixmap = <optimized out>
        __PRETTY_FUNCTION__ = "IA__gdk_pixmap_colormap_create_from_xpm_d"
#5  0x000000000040c5d8 in main (argc=1, argv=0x7fffffffe368) at main.c:5393
        ii = 7
        i = <optimized out>
        j = <optimized out>
        error = <optimized out>
        bondnums = {"0\000", "1\000", "2\000 ", "3", <incomplete sequence \367>, "4\000", "5", <incomplete sequence \342>, "6\000\377", 
          "7\000", "8", <incomplete sequence \374>, "9\000\177", "10", "11", "12", "13", "14", "15", "16", "17", "18", "19", "20", "21"}
        bondcolors = {"0\000\000", "1\000\000", "2\000\377", <incomplete sequence \367>, "3\000\000", "4\000\377\377", "5\000\000", 
          "6\000\377\377", "\377\177\000"}
        msgtmp = "\320\341\377\377\377\177\000\000\340\340\377\377\377\177\000\000\by\374\367\377\177\000\000-\000\000\000\000\000\000\000.N=\366\000\000\000\000ce\336\367\377\177", '\000' <repeats 18 times>, ".\000\000\000\000\000\000\000\070\365\330\003\000\000\000\000lZ\037\366\377\177\000\000P\342\377\377\377\177\000\000`\\", <incomplete sequence \366>
        fontsizelabel = {0x46e773 "8", 0x46e7c4 "10", 0x46e7d1 "12", 0x46e7de "14", 0x46e7eb "17", 0x46e7f8 "20", 0x46e805 "24"}
        aboutw = 0x6fb0b0
        helpw = 0x6fb1f0
        helptext = <optimized out>
        vbox = 0x89cc80
        hbox = 0x89cd10
        button = <optimized out>
        expbutton = {0x856ae0, 0x856c80, 0x856e20, <optimized out>, <optimized out>, <optimized out>, <optimized out>, <optimized out>, 
          <optimized out>}
        accel_group = <optimized out>
        menu_bar = <optimized out>
        file = <optimized out>
        file_menu = 0x89cd10
        new = <optimized out>
        open = <optimized out>
        add = <optimized out>
        import = <optimized out>
        imppdb = <optimized out>
        impany = <optimized out>
        export = <optimized out>
        expany = <optimized out>
        printps = 0x879e40
        save = <optimized out>
        saveas = <optimized out>
        quit = <optimized out>
        edit = <optimized out>
        edit_menu = 0x7748e0
        print_setup = <optimized out>
        save_setup = <optimized out>
        copy = 0x8a9390
        fliph = <optimized out>
        flipv = <optimized out>
        undo = <optimized out>
        redo = <optimized out>
        view = <optimized out>
        view_menu = 0x8ad2d0
        zoomin = <optimized out>
        zoomout = 0x8c58c0
        center = <optimized out>
        grid = <optimized out>
        tools = <optimized out>
        tools_menu = 0x8ad590
        templatem = <optimized out>
        cht = <optimized out>
        clean = <optimized out>
        help = 0x8c58c0
        help_menu = <optimized out>
        about = <optimized out>
        using = <optimized out>
        label = <optimized out>
        pixmap = <optimized out>
        pixmapwid = <optimized out>
        adj_scale = <optimized out>
        group = 0x0
        style = 0x733af0
        tooltips = 0x87cc70
        temptips = 0x733b44
        templatebook = 0x8ad590
        page = 0x87e350
        tvbox = 0x856720
        pbox = 0x89cd10
        vscroll = <optimized out>
        textscroll = <optimized out>
        babelcmditem = <optimized out>
        babelexpcmditem = <optimized out>
        black = {pixel = 0, red = 0, green = 0, blue = 0}
        blue = {pixel = 0, red = 0, green = 0, blue = 57344}
        green = {pixel = 0, red = 0, green = 53248, blue = 0}
        cyan = {pixel = 0, red = 0, green = 65535, blue = 65535}
        red = {pixel = 0, red = 65535, green = 0, blue = 0}
        magenta = {pixel = 0, red = 65535, green = 0, blue = 65535}
        yellow = {pixel = 0, red = 65535, green = 65535, blue = 0}
        white = {pixel = 0, red = 65535, green = 65535, blue = 65535}
        helptextbuffer = <optimized out>
        ht_iter = {dummy1 = 0x6eca80, dummy2 = 0x726d40, dummy3 = -1, dummy4 = 47, dummy5 = 2822, dummy6 = -1, dummy7 = -1263694596, 
          dummy8 = 673085986, dummy9 = 0x6eca20, dummy10 = 0x6ed6e0, dummy11 = -1, dummy12 = 0, dummy13 = 0, dummy14 = 0x7ffff70673bc}
        helpmessage = 0x4338e8 "Click and drag the mouse to draw bonds on the canvas. \nThe right mouse button is used to delete objects - either bonds\nor text depending on which drawing mode is active.\n\nThe buttons with different ri"...
        canvash = <optimized out>
A debugging session is active.

	Inferior 1 [process 3368] will be killed.

Quit anyway? (y or n) 


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