[Debichem-devel] Bug#668586: pymol: Segfaults when opening saved session or show

[dreamer]

Subject: pymol: Segfaults when opening saved session or show
Package: pymol
Version: 1.4.1-3+b2
Severity: important

Dear Maintainer,

   * What exactly did you do (or not do) that was effective (or
     ineffective)?

Save current session/show of molecule(s) and view.
Open session/show in new pymol instance.

   * What was the outcome of this action?

$ pymol ../test.pse
 PyMOL(TM) Molecular Graphics System, Version 1.4.1.
 Copyright (c) Schrodinger, LLC.
 All Rights Reserved.

    Created by Warren L. DeLano, Ph.D.

    PyMOL is user-supported open-source software.  Although some versions
    are freely available, PyMOL is not in the public domain.

    If PyMOL is helpful in your work or study, then please volunteer
    support for our ongoing efforts to create open and affordable scientific
    software by purchasing a PyMOL Maintenance and/or Support subscription.

    More information can be found at "http://www.pymol.org".

    Enter "help" for a list of commands.
    Enter "help <command-name>" for information on a specific command.

 Hit ESC anytime to toggle between text and graphics.

 Detected OpenGL version 2.0 or greater.  Shaders available.
 Detected GLSL version 3.30.
 OpenGL graphics engine:
  GL_VENDOR: NVIDIA Corporation
  GL_RENDERER: GeForce 8600M GT/PCIe/SSE2
  GL_VERSION: 3.3.0 NVIDIA 295.20
 Detected 2 CPU cores.  Enabled multithreaded rendering.
 Executive: Loading version 1.41 session...
TypeError: bad argument type for built-in operation
ExectiveSetSession-Error: after view.
ExectiveSetSession-Warning: restore may be incomplete.
Segmentation fault


-- System Information:
Debian Release: wheezy/sid
  APT prefers unstable
  APT policy: (500, 'unstable')
Architecture: i386 (i686)

Kernel: Linux 3.2.0-10.dmz.1-liquorix-686 (SMP w/2 CPU cores; PREEMPT)
Locale: LANG=en_US.utf8, LC_CTYPE=en_US.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages pymol depends on:
ii  freeglut3                 2.6.0-1.1
ii  libc6                     2.13-27
ii  libfreetype6              2.4.9-1
ii  libgcc1                   1:4.7.0-1
ii  libgl1-mesa-glx [libgl1]  7.11.2-1
ii  libglew1.7                1.7.0-3
ii  libglu1-mesa [libglu1]    7.11.2-1
ii  libpng12-0                1.2.47-2
ii  libstdc++6                4.7.0-1
ii  python                    2.7.2-10
ii  python-pmw                1.3.2-6
ii  python-tk                 2.7.3-1
ii  python2.7                 2.7.3~rc2-1
ii  zlib1g                    1:1.2.6.dfsg-2

Versions of packages pymol recommends:
pn  apbs  <none>

pymol suggests no packages.

-- no debconf information
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