[Debichem-devel] Bug#689445: pymol fail to load its own session (pse files)

manu miglesias at iqfr.csic.es
Tue Oct 2 17:20:29 UTC 2012


Package: pymol
Version: 1.5.0.1-2
Severity: grave
Tags: upstream
Justification: renders package unusable

Dear Maintainer,

Pymol saves properly the current session but fails to load the files
afterwards. The pse file generated can be imported sucessfully in other pymol
versions

The reported error is:

Copyright (c) Schrodinger, LLC.
 All Rights Reserved.

    Created by Warren L. DeLano, Ph.D.

    PyMOL is user-supported open-source software.  Although some versions
    are freely available, PyMOL is not in the public domain.

    If PyMOL is helpful in your work or study, then please volunteer
    support for our ongoing efforts to create open and affordable scientific
    software by purchasing a PyMOL Maintenance and/or Support subscription.

    More information can be found at "http://www.pymol.org".

    Enter "help" for a list of commands.
    Enter "help <command-name>" for information on a specific command.

 Hit ESC anytime to toggle between text and graphics.

 Detected OpenGL version 2.0 or greater. Shaders available.
 Detected GLSL version 1.20.
 OpenGL graphics engine:
  GL_VENDOR: Tungsten Graphics, Inc
  GL_RENDERER: Mesa DRI Mobile Intel® GM45 Express Chipset x86/MMX/SSE2
  GL_VERSION: 2.1 Mesa 8.0.4
 Executive: Loading version 1.501 session...
TypeError: bad argument type for built-in operation
ExectiveSetSession-Error: after view.
ExectiveSetSession-Warning: restore may be incomplete.
Segmentation fault

I am using debian wheeze/sid with python2.7.3rc3

Thanks in advance



-- System Information:
Debian Release: wheezy/sid
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: i386 (i686)

Kernel: Linux 3.2.0-3-686-pae (SMP w/1 CPU core)
Locale: LANG=es_ES.UTF-8, LC_CTYPE=es_ES.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages pymol depends on:
ii  freeglut3                 2.6.0-4
ii  libc6                     2.13-35
ii  libfreetype6              2.4.9-1
ii  libgcc1                   1:4.7.1-7
ii  libgl1-mesa-glx [libgl1]  8.0.4-2
ii  libglew1.7                1.7.0-3
ii  libglu1-mesa [libglu1]    8.0.4-2
ii  libpng12-0                1.2.49-1
ii  libstdc++6                4.7.1-7
ii  python                    2.7.3~rc2-1
ii  python-pmw                1.3.2-6
ii  python-tk                 2.7.3-1
ii  python2.7                 2.7.3~rc2-2.1
ii  zlib1g                    1:1.2.7.dfsg-13

Versions of packages pymol recommends:
ii  apbs  1.3.0-2

pymol suggests no packages.

-- no debconf information



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