[Debichem-devel] Bug#701290: gnome-chemistry-utils: ftbfs with GCC-4.8

[Matthias Klose]

Package: src:gnome-chemistry-utils
Version: 0.12.12-1
Severity: important
Tags: sid jessie
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-4.8

The package fails to build in a test rebuild on at least amd64 with
gcc-4.8/g++-4.8, but succeeds to build with gcc-4.7/g++-4.7. The
severity of this report may be raised before the jessie release.

  dh_makeshlibs: dpkg-gensymbols -plibgcu0 -Idebian/libgcu0.symbols -Pdebian/libgcu0 returned exit code 1

The full build log can be found at:
http://people.debian.org/~doko/logs-20130217/gcc48/gnome-chemistry-utils_0.12.12-1_unstable_gcc48.log
The last lines of the build log are at the end of this report.

To build with GCC 4.8, either set CC=gcc-4.8 CXX=g++-4.8 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t experimental install g++ g++-4.7 g++-4.8 libc6-dev

The test rebuild was done with eglibc-2.17 and GCC-4.8, so some issues
might be caused by the updated glibc.

[...]
  (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiSt3setIPN3gcu4AtomESt4lessIS5_ESaIS5_EEESt10_Select1stISA_ES6_IiESaISA_EE17_M_insert_unique_ESt23_Rb_tree_const_iteratorISA_ERKSA_ at Base 0.12.8
+ _ZNSt8_Rb_treeIiSt4pairIKiSt3setIPN3gcu4AtomESt4lessIS5_ESaIS5_EEESt10_Select1stISA_ES6_IiESaISA_EE24_M_get_insert_unique_posERS1_ at Base 0.12.12-1
+ _ZNSt8_Rb_treeIiSt4pairIKiSt3setIPN3gcu4AtomESt4lessIS5_ESaIS5_EEESt10_Select1stISA_ES6_IiESaISA_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISA_ERS1_ at Base 0.12.12-1
  (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiSt3setIPN3gcu4AtomESt4lessIS5_ESaIS5_EEESt10_Select1stISA_ES6_IiESaISA_EE8_M_eraseEPSt13_Rb_tree_nodeISA_E at Base 0.12.8
- (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE10_M_insert_EPKSt18_Rb_tree_node_baseSB_RKS2_ at Base 0.12.8
- (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE16_M_insert_uniqueERKS2_ at Base 0.12.8
- (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE17_M_insert_unique_ESt23_Rb_tree_const_iteratorIS2_ERKS2_ at Base 0.12.8
+#MISSING: 0.12.12-1# (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE10_M_insert_EPKSt18_Rb_tree_node_baseSB_RKS2_ at Base 0.12.8
+#MISSING: 0.12.12-1# (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE16_M_insert_uniqueERKS2_ at Base 0.12.8
+#MISSING: 0.12.12-1# (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE17_M_insert_unique_ESt23_Rb_tree_const_iteratorIS2_ERKS2_ at Base 0.12.8
+ _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_ at Base 0.12.12-1
+ _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_ at Base 0.12.12-1
  (optional=templinst)_ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E at Base 0.12.8
- (optional=templinst)_ZNSt8_Rb_treeIjjSt9_IdentityIjESt4lessIjESaIjEE10_M_insert_EPKSt18_Rb_tree_node_baseS8_RKj at Base 0.12.8
+#MISSING: 0.12.12-1# (optional=templinst)_ZNSt8_Rb_treeIjjSt9_IdentityIjESt4lessIjESaIjEE10_M_insert_EPKSt18_Rb_tree_node_baseS8_RKj at Base 0.12.8
  (optional=templinst)_ZNSt8_Rb_treeIjjSt9_IdentityIjESt4lessIjESaIjEE16_M_insert_uniqueERKj at Base 0.12.8
  (optional=templinst)_ZNSt8_Rb_treeIjjSt9_IdentityIjESt4lessIjESaIjEE7_M_copyEPKSt13_Rb_tree_nodeIjEPS7_ at Base 0.12.8
  (optional=templinst)_ZNSt8_Rb_treeIjjSt9_IdentityIjESt4lessIjESaIjEE8_M_eraseEPSt13_Rb_tree_nodeIjE at Base 0.12.8
@@ -3139,16 +3246,16 @@
  _ZTVN3gcu9Chem3dDocE at Base 0.12.8
  _ZTVN3gcu9PrintableE at Base 0.12.8
  _ZTVN3gcu9UIBuilderE at Base 0.12.8
- (c++)"construction vtable for gcu::Document-in-gcu::Chem3dDoc at Base" 0.12.8
- (c++)"construction vtable for gcu::Document-in-gcu::CrystalDoc at Base" 0.12.8
- (c++)"construction vtable for gcu::Document-in-gcu::GLDocument at Base" 0.12.8
- (c++)"construction vtable for gcu::Document-in-gcu::SpectrumDocument at Base" 0.12.8
- (c++)"construction vtable for gcu::GLDocument-in-gcu::Chem3dDoc at Base" 0.12.8
- (c++)"construction vtable for gcu::GLDocument-in-gcu::CrystalDoc at Base" 0.12.8
- (c++)"construction vtable for gcu::GLView-in-gcu::CrystalView at Base" 0.12.8
- (c++)"construction vtable for gcu::Printable-in-gcu::CrystalView at Base" 0.12.8
- (c++)"construction vtable for gcu::Printable-in-gcu::GLView at Base" 0.12.8
- (c++)"construction vtable for gcu::Printable-in-gcu::SpectrumDocument at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Document-in-gcu::Chem3dDoc at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Document-in-gcu::CrystalDoc at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Document-in-gcu::GLDocument at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Document-in-gcu::SpectrumDocument at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::GLDocument-in-gcu::Chem3dDoc at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::GLDocument-in-gcu::CrystalDoc at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::GLView-in-gcu::CrystalView at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Printable-in-gcu::CrystalView at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Printable-in-gcu::GLView at Base" 0.12.8
+#MISSING: 0.12.12-1# (c++)"construction vtable for gcu::Printable-in-gcu::SpectrumDocument at Base" 0.12.8
  gcu_chem3d_viewer_get_type at Base 0.12.8
  gcu_chem3d_viewer_new at Base 0.12.8
  gcu_chem3d_viewer_new_pixbuf at Base 0.12.8
dh_makeshlibs: dpkg-gensymbols -plibgcu0 -Idebian/libgcu0.symbols -Pdebian/libgcu0 returned exit code 1
make[1]: *** [override_dh_makeshlibs] Error 1
make[1]: Leaving directory `/«PKGBUILDDIR»'
make: *** [binary-arch] Error 2
dpkg-buildpackage: error: fakeroot debian/rules binary-arch gave error exit status 2