[Debichem-devel] Bug#718001: gromacs-mpich, gromacs-openmpi: fails to upgrade from wheezy - trying to overwrite /usr/lib/libgmxpreprocess_mpi_d.mpich.so

Andreas Beckmann anbe at debian.org
Sat Jul 27 19:09:05 UTC 2013


Package: gromacs-mpich,gromacs-openmpi
Version: 4.6.3-1
Severity: serious
User: debian-qa at lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package fails to upgrade from
'wheezy'.
It installed fine in 'wheezy', then the upgrade to 'jessie' fails
because it tries to overwrite other packages files without declaring a
Breaks+Replaces relation.

See policy 7.6 at
http://www.debian.org/doc/debian-policy/ch-relationships.html#s-replaces

>From the attached log (scroll to the bottom...):

  Selecting previously unselected package gromacs-mpich.
  Unpacking gromacs-mpich (from .../gromacs-mpich_4.6.3-1_amd64.deb) ...
  dpkg: error processing /var/cache/apt/archives/gromacs-mpich_4.6.3-1_amd64.deb (--unpack):
   trying to overwrite '/usr/lib/libgmxpreprocess_mpi_d.mpich.so', which is also in package gromacs-dev 4.5.5-2
  Errors were encountered while processing:
   /var/cache/apt/archives/gromacs-mpich_4.6.3-1_amd64.deb

  Selecting previously unselected package gromacs-openmpi.
  Unpacking gromacs-openmpi (from .../gromacs-openmpi_4.6.3-1_amd64.deb) ...
  dpkg: error processing /var/cache/apt/archives/gromacs-openmpi_4.6.3-1_amd64.deb (--unpack):
   trying to overwrite '/usr/lib/libgmxpreprocess_mpi_d.openmpi.so', which is also in package gromacs-dev 4.5.5-2
  Errors were encountered while processing:
   /var/cache/apt/archives/gromacs-openmpi_4.6.3-1_amd64.deb


cheers,

Andreas
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