[Debichem-devel] Bug#703782: pymol: Unable to launch the Menu

[lina]

Package: pymol
Version: 1.5.0.1-2
Severity: normal

Dear Maintainer,
    
    Traceback (most recent call last):
      File "/usr/lib/python2.7/dist-packages/pymol/__init__.py", line 452, in launch_gui
          sys.modules[self.invocation.options.gui].__init__(self,poll,skin)
          TypeError: module.__init__() takes at most 2 arguments (3 given)

     
     I can only launch the PyMOL Viewer.

     Recently updated packages:
     [UPGRADE] idle-python3.2:amd64 3.2.3-6 -> 3.2.3-7
     [UPGRADE] libpython3.2:amd64 3.2.3-6 -> 3.2.3-7
     [UPGRADE] python-gi:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gi-cairo:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gobject:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gpgme:amd64 0.2-2 -> 0.2-3
     [UPGRADE] python-libxml2:amd64 2.8.0+dfsg1-7 -> 2.8.0+dfsg1-7+nmu1
     [UPGRADE] python-numpy:amd64 1:1.6.2-1 -> 1:1.6.2-1.2
     [INSTALL] python-scipy:amd64
     [INSTALL, DEPENDENCIES] python-dateutil:amd64
     [INSTALL, DEPENDENCIES] python-matplotlib-data:amd64
     [INSTALL, DEPENDENCIES] python-tz:amd64
     [INSTALL] python-matplotlib:amd64
     [INSTALL] python-setuptools:amd64
     [INSTALL, DEPENDENCIES] python-antlr:amd64
     [INSTALL, DEPENDENCIES] python-joblib:amd64
     [INSTALL, DEPENDENCIES] python-nose:amd64
     [INSTALL, DEPENDENCIES] python-numexpr:amd64
     [INSTALL, DEPENDENCIES] python-openpyxl:amd64
     [INSTALL, DEPENDENCIES] python-pandas:amd64
     [INSTALL, DEPENDENCIES] python-pandas-lib:amd64
     [INSTALL, DEPENDENCIES] python-simplejson:amd64
     [INSTALL, DEPENDENCIES] python-sklearn:amd64
     [INSTALL, DEPENDENCIES] python-sklearn-lib:amd64
     [INSTALL, DEPENDENCIES] python-statsmodels:amd64
     [INSTALL, DEPENDENCIES] python-statsmodels-lib:amd64
     [INSTALL, DEPENDENCIES] python-tables:amd64
     [INSTALL, DEPENDENCIES] python-xlrd:amd64
     [INSTALL, DEPENDENCIES] python-xlwt:amd64
     [INSTALL] python-scikits-learn:amd64
     [INSTALL] python-scikits.statsmodels:amd64
     [INSTALL] python-cvxopt:amd64
     [UPGRADE] python-apt:amd64 0.8.8.1 -> 0.8.8.2
     [UPGRADE] python-apt-common:amd64 0.8.8.1 -> 0.8.8.2
     [UPGRADE] idle-python3.2:amd64 3.2.3-6 -> 3.2.3-7
     [UPGRADE] libpython3.2:amd64 3.2.3-6 -> 3.2.3-7
     [UPGRADE] python-gi:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gi-cairo:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gobject:amd64 3.2.2-1 -> 3.2.2-2
     [UPGRADE] python-gpgme:amd64 0.2-2 -> 0.2-3
     [UPGRADE] python-libxml2:amd64 2.8.0+dfsg1-7 -> 2.8.0+dfsg1-7+nmu1
     [UPGRADE] python-numpy:amd64 1:1.6.2-1 -> 1:1.6.2-1.2
     [INSTALL] python-scipy:amd64
     [INSTALL, DEPENDENCIES] python-dateutil:amd64
     [INSTALL, DEPENDENCIES] python-matplotlib-data:amd64
     [INSTALL, DEPENDENCIES] python-tz:amd64
     [INSTALL] python-matplotlib:amd64
     [INSTALL] python-setuptools:amd64
     [INSTALL, DEPENDENCIES] python-antlr:amd64
     [INSTALL, DEPENDENCIES] python-joblib:amd64
     [INSTALL, DEPENDENCIES] python-nose:amd64
     [INSTALL, DEPENDENCIES] python-numexpr:amd64
     [INSTALL, DEPENDENCIES] python-openpyxl:amd64
     [INSTALL, DEPENDENCIES] python-pandas:amd64
     [INSTALL, DEPENDENCIES] python-pandas-lib:amd64
     [INSTALL, DEPENDENCIES] python-simplejson:amd64
     [INSTALL, DEPENDENCIES] python-sklearn:amd64
     [INSTALL, DEPENDENCIES] python-sklearn-lib:amd64
     [INSTALL, DEPENDENCIES] python-statsmodels:amd64
     [INSTALL, DEPENDENCIES] python-statsmodels-lib:amd64
     [INSTALL, DEPENDENCIES] python-tables:amd64
     [INSTALL, DEPENDENCIES] python-xlrd:amd64
     [INSTALL, DEPENDENCIES] python-xlwt:amd64
     [INSTALL] python-scikits-learn:amd64
     [INSTALL] python-scikits.statsmodels:amd64
     [INSTALL] python-cvxopt:amd64
     [UPGRADE] python-apt:amd64 0.8.8.1 -> 0.8.8.2
     [UPGRADE] python-apt-common:amd64 0.8.8.1 -> 0.8.8.2

    Thanks,         

-- System Information:
Debian Release: 7.0
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.7.9-lina (SMP w/8 CPU cores)
Locale: LANG=en_SG.UTF-8, LC_CTYPE=en_SG.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages pymol depends on:
ii  freeglut3                 2.6.0-4
ii  libc6                     2.13-38
ii  libfreetype6              2.4.9-1.1
ii  libgcc1                   1:4.7.2-5
ii  libgl1-mesa-glx [libgl1]  8.0.5-3
ii  libglew1.7                1.7.0-3
ii  libglu1-mesa [libglu1]    8.0.5-3
ii  libpng12-0                1.2.49-1
ii  libstdc++6                4.7.2-5
ii  python                    2.7.3-4
ii  python-pmw                1.3.2-6
ii  python-tk                 2.7.3-1
ii  python2.7                 2.7.3-6
ii  zlib1g                    1:1.2.7.dfsg-13

Versions of packages pymol recommends:
ii  apbs  1.3.0-2

pymol suggests no packages.

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