[Debichem-devel] Bug#805823: openms: Fails to build with GSL 2

[Bas Couwenberg]

Source: openms
Version: 1.11.1-5
Severity: important
Tags: upstream

Your package fails to build with GSL 2:

 /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C: In member function 'void OpenMS::TransformationModelBSpline::computeLinear_(double, double&, double&, double&)':
 /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C:366:70: error: too many arguments to function 'int gsl_bspline_deriv_eval(double, size_t, gsl_matrix*, gsl_bspline_workspace*)'
      gsl_bspline_deriv_eval(pos, 1, deriv, workspace_, deriv_workspace);
                                                                       ^
 In file included from /tmp/buildd/openms-1.11.1/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h:40:0,
                  from /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C:35:
 /usr/include/gsl/gsl_bspline.h:107:1: note: declared here
  gsl_bspline_deriv_eval(const double x,
  ^

This needs to be fixed for the ongoing gsl transition (#804246).

The full build log is attached, as is a patch to update the build
dependencies for GSL 2 (changing libgsl0-dev to libgsl-dev).

Kind Regards,

Bas
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I: using cowbuilder as pbuilder
dpkg-checkbuilddeps: Unmet build dependencies: libgsl-dev (>= 1.15+dfsg) libboost-iostreams-dev (>= 1.54.0) libboost-date-time-dev (>= 1.54.0) libboost-math-dev (>= 1.54.0) seqan-dev (>= 1.4.1) libsvm-dev (>= 3.12) libglpk-dev (>= 4.52.1) cppcheck (>= 1.54) libqt4-dev (>= 4.8.2) libqt4-opengl-dev (>= 4.8.2) libqtwebkit-dev (>= 2.2.1) coinor-libcoinutils-dev (>= 2.6.4)
W: Unmet build-dependency in source
dpkg-buildpackage: source package openms
dpkg-buildpackage: source version 1.11.1-5.1
dpkg-buildpackage: source distribution UNRELEASED
dpkg-buildpackage: source changed by Bas Couwenberg <sebastic at debian.org>
 dpkg-source --before-build openms-1.11.1
dpkg-checkbuilddeps: Unmet build dependencies: libgsl-dev (>= 1.15+dfsg) libboost-iostreams-dev (>= 1.54.0) libboost-date-time-dev (>= 1.54.0) libboost-math-dev (>= 1.54.0) seqan-dev (>= 1.4.1) libsvm-dev (>= 3.12) libglpk-dev (>= 4.52.1) cppcheck (>= 1.54) libqt4-dev (>= 4.8.2) libqt4-opengl-dev (>= 4.8.2) libqtwebkit-dev (>= 2.2.1) coinor-libcoinutils-dev (>= 2.6.4)
dpkg-buildpackage: warning: build dependencies/conflicts unsatisfied; aborting
dpkg-buildpackage: warning: (Use -d flag to override.)
dpkg-buildpackage: warning: this is currently a non-fatal warning with -S, but will probably become fatal in the future
 fakeroot debian/rules clean
"---------------------------------------"
NUMJOBS: 
MAKEFLAGS: 
DEB_BUILD_OPTIONS: parallel=3
"---------------------------------------"
dh_testdir
dh_testroot
dh_clean
	rm -f debian/libopenms1.11.substvars
	rm -f debian/libopenms1.11.*.debhelper
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	rm -f debian/topp.substvars
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	rm -f debian/openms-common.substvars
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	rm -f debian/files
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
	rm -f *-stamp
rm -rf /home/bas/tmp/debian/openms-1.11.1/debian/build
rm -f debian/TOPPAS.xpm
rm -f debian/TOPPView.xpm
rm -f debian/topp.1
 dpkg-source -b openms-1.11.1
dpkg-source: info: using source format `3.0 (quilt)'
dpkg-source: info: building openms using existing ./openms_1.11.1.orig.tar.bz2
dpkg-source: info: building openms in openms_1.11.1-5.1.debian.tar.xz
dpkg-source: info: building openms in openms_1.11.1-5.1.dsc
 dpkg-genchanges -S >../openms_1.11.1-5.1_source.changes
dpkg-genchanges: not including original source code in upload
 dpkg-source --after-build openms-1.11.1
dpkg-buildpackage: binary and diff upload (original source NOT included)
 -> Copying COW directory
  forking: rm -rf /var/cache/pbuilder/build//cow.23784 
  forking: cp -al /var/cache/pbuilder/base-sid.cow /var/cache/pbuilder/build//cow.23784 
I: removed stale ilistfile /var/cache/pbuilder/build//cow.23784/.ilist
  forking: chroot /var/cache/pbuilder/build//cow.23784 cowdancer-ilistcreate /.ilist find . -xdev -path ./home -prune -o \( \( -type l -o -type f \) -a -links +1 -print0 \) | xargs -0 stat --format '%d %i ' 
 -> Invoking pbuilder
  forking: pbuilder build --debbuildopts  --debbuildopts  --buildplace /var/cache/pbuilder/build//cow.23784 --buildresult /var/cache/pbuilder/result/ --debbuildopts  --no-targz --internal-chrootexec chroot /var/cache/pbuilder/build//cow.23784 cow-shell /home/bas/tmp/debian/openms_1.11.1-5.1.dsc 
I: Running in no-targz mode
I: using fakeroot in build.
I: pbuilder: network access will be disabled during build
I: Current time: Sun Nov 22 20:57:26 CET 2015
I: pbuilder-time-stamp: 1448222246
I: copying local configuration
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I: policy-rc.d already exists
I: Obtaining the cached apt archive contents
I: Installing the build-deps
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 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint at lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper (>= 7.0.50~), dpkg-dev (>= 1.16.1~), cmake (>= 2.6.3), libxerces-c-dev (>= 3.1.1), libgsl-dev (>= 1.15+dfsg), libboost-dev (>= 1.54.0), libboost-iostreams-dev (>= 1.54.0), libboost-date-time-dev (>= 1.54.0), libboost-math-dev (>= 1.54.0), seqan-dev (>= 1.4.1), libsvm-dev (>= 3.12), libglpk-dev (>= 4.52.1), zlib1g-dev (>= 1.2.7), libbz2-dev (>= 1.0.6), cppcheck (>= 1.54), libqt4-dev (>= 4.8.2), libqt4-opengl-dev (>= 4.8.2), libqtwebkit-dev (>= 2.2.1), coinor-libcoinutils-dev (>= 2.6.4), imagemagick, doxygen (>= 1.8.1.2), graphviz, texlive-extra-utils, texlive-latex-extra, latex-xcolor, texlive-font-utils, ghostscript, texlive-fonts-recommended
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
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dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper (>= 7.0.50~); however:
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 pbuilder-satisfydepends-dummy depends on cmake (>= 2.6.3); however:
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  Package libboost-iostreams-dev is not installed.
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 pbuilder-satisfydepends-dummy depends on libboost-math-dev (>= 1.54.0); however
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
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0 packages upgraded, 307 newly installed, 0 to remove and 0 not upgraded.
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Setting up iso-codes (3.63-1) ...
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Setting up libtexluajit2:amd64 (2015.20150524.37493-7) ...
Setting up libxerces-c3.1:amd64 (3.1.2+debian-1) ...
Setting up libxerces-c-dev (3.1.2+debian-1) ...
Setting up libxi6:amd64 (2:1.7.5-1) ...
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update-language: texlive-base not installed and configured, doing nothing!
Setting up preview-latex-style (11.88-1.1) ...
update-language: texlive-base not installed and configured, doing nothing!
Regenerating '/var/lib/texmf/fmtutil.cnf-DEBIAN'... done.
Regenerating '/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST'... done.
update-fmtutil has updated the following file(s):
	/var/lib/texmf/fmtutil.cnf-DEBIAN
	/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST
If you want to activate the changes in the above file(s),
you should run fmtutil-sys or fmtutil.
Setting up seqan-dev (1.4.1+dfsg-2) ...
Setting up t1utils (1.38-4) ...
Setting up xdg-utils (1.1.1-1) ...
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update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up dh-strip-nondeterminism (0.014-1) ...
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Processing triggers for tex-common (6.04) ...
update-language: texlive-base not installed and configured, doing nothing!
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up texlive-base (2015.20151116-1) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Processing triggers for tex-common (6.04) ...
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Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Setting up texlive-font-utils (2015.20151116-1) ...
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Setting up texlive-latex-base (2015.20151116-1) ...
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Building format(s) --all.
	This may take some time... done.
Setting up texlive-latex-recommended (2015.20151116-1) ...
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Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-latex-extra (2015.20151116-1) ...
Processing triggers for libc-bin (2.19-22) ...
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Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
  libfakeroot
The following NEW packages will be installed:
  fakeroot libfakeroot
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/129 kB of archives.
After this operation, 434 kB of additional disk space will be used.
Selecting previously unselected package libfakeroot:amd64.
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(Reading database ... 57615 files and directories currently installed.)
Preparing to unpack .../libfakeroot_1.20.2-1_amd64.deb ...
Unpacking libfakeroot:amd64 (1.20.2-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../fakeroot_1.20.2-1_amd64.deb ...
Unpacking fakeroot (1.20.2-1) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up libfakeroot:amd64 (1.20.2-1) ...
Setting up fakeroot (1.20.2-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
I: Copying back the cached apt archive contents
I: new cache content coinor-libcoinutils3v5_2.9.15-3.1_amd64.deb added
I: new cache content seqan-dev_1.4.1+dfsg-2_all.deb added
I: new cache content coinor-libcoinutils-dev_2.9.15-3.1_amd64.deb added
I: Copying source file
I: copying [/home/bas/tmp/debian/openms_1.11.1-5.1.dsc]
I: copying [/home/bas/tmp/debian/openms_1.11.1.orig.tar.bz2]
I: copying [/home/bas/tmp/debian/openms_1.11.1-5.1.debian.tar.xz]
I: Extracting source
dpkg-source: warning: extracting unsigned source package (openms_1.11.1-5.1.dsc)
dpkg-source: info: extracting openms in openms-1.11.1
dpkg-source: info: unpacking openms_1.11.1.orig.tar.bz2
dpkg-source: info: unpacking openms_1.11.1-5.1.debian.tar.xz
dpkg-source: info: applying doc-path-for-debian.patch
dpkg-source: info: applying debian-specific-build-config.patch
dpkg-source: info: applying user-manual-latex-code-fix-doxygen-problem
I: Building the package
W: no hooks of type A found -- ignoring
I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" dpkg-buildpackage -us -uc  -rfakeroot
dpkg-buildpackage: source package openms
dpkg-buildpackage: source version 1.11.1-5.1
dpkg-buildpackage: source distribution UNRELEASED
dpkg-buildpackage: source changed by Bas Couwenberg <sebastic at debian.org>
 dpkg-source --before-build openms-1.11.1
dpkg-buildpackage: host architecture amd64
 fakeroot debian/rules clean
"---------------------------------------"
NUMJOBS: 
MAKEFLAGS: 
DEB_BUILD_OPTIONS: parallel=3
"---------------------------------------"
dh_testdir
dh_testroot
dh_clean
	rm -f debian/libopenms1.11.substvars
	rm -f debian/libopenms1.11.*.debhelper
	rm -rf debian/libopenms1.11/
	rm -f debian/libopenms-dev.substvars
	rm -f debian/libopenms-dev.*.debhelper
	rm -rf debian/libopenms-dev/
	rm -f debian/topp.substvars
	rm -f debian/topp.*.debhelper
	rm -rf debian/topp/
	rm -f debian/openms-common.substvars
	rm -f debian/openms-common.*.debhelper
	rm -rf debian/openms-common/
	rm -f debian/openms-doc.substvars
	rm -f debian/openms-doc.*.debhelper
	rm -rf debian/openms-doc/
	rm -f debian/openms.substvars
	rm -f debian/openms.*.debhelper
	rm -rf debian/openms/
	rm -rf debian/.debhelper/
	rm -f debian/*.debhelper.log
	rm -f debian/files
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
	rm -f *-stamp
rm -rf /tmp/buildd/openms-1.11.1/debian/build
rm -f debian/TOPPAS.xpm
rm -f debian/TOPPView.xpm
rm -f debian/topp.1
 dpkg-source -b openms-1.11.1
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building openms using existing ./openms_1.11.1.orig.tar.bz2
dpkg-source: info: building openms in openms_1.11.1-5.1.debian.tar.xz
dpkg-source: info: building openms in openms_1.11.1-5.1.dsc
 debian/rules build
"---------------------------------------"
NUMJOBS: 
MAKEFLAGS: 
DEB_BUILD_OPTIONS: parallel=3
"---------------------------------------"
dh_testdir
dh_prep -a
	rm -f debian/libopenms1.11.substvars
	rm -f debian/libopenms1.11.*.debhelper
	rm -rf debian/libopenms1.11/
	rm -f debian/libopenms-dev.substvars
	rm -f debian/libopenms-dev.*.debhelper
	rm -rf debian/libopenms-dev/
	rm -f debian/topp.substvars
	rm -f debian/topp.*.debhelper
	rm -rf debian/topp/
mkdir -p /tmp/buildd/openms-1.11.1/debian/build
DEB_BUILD_GNU_TYPE: x86_64-linux-gnu
DEB_HOST_MULTIARCH: x86_64-linux-gnu
cd /tmp/buildd/openms-1.11.1/debian/build && \
 /usr/bin/cmake -DCMAKE_FIND_LIBRARY_SUFFIXES=".so" \
 -DCONTRIB_LIB_DIR="/usr/lib;/usr/lib/x86_64-linux-gnu;/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/lib/x86_64-linux-gnu" \
 -DCF_OPENMS_DATA_PATH=/usr/share/openms-common/OpenMS/ \
 -DCF_OPENMS_DOC_PATH=/usr/share/doc/openms-doc/ \
 -DCMAKE_BUILD_TYPE=release \
 -DDEBIAN_BUILD=ON -DBOOST_USE_STATIC=OFF ../.. 
-- The C compiler identification is GNU 5.2.1
-- The CXX compiler identification is GNU 5.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Architecture: 64 bit
-- Performing Test WITH_FPIC
-- Performing Test WITH_FPIC - Success
-- Compiler checks for conversion: OFF
-- [GCC only] STL debug mode: OFF
-- NVIDIA CUDA: OFF
-- Intel TBB: OFF
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp  
-- OPENMP: ON
-- CMake find root path: /tmp/buildd/openms-1.11.1/contrib;/opt/local;/usr/local
-- Contrib search directories:  /tmp/buildd/openms-1.11.1/contrib;/opt/local;/usr/local
-- Contrib library directories: /usr/lib;/usr/lib/x86_64-linux-gnu;/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/lib/x86_64-linux-gnu;/tmp/buildd/openms-1.11.1/contrib/lib/;/opt/local/lib/;/usr/local/lib/
-- Contrib include directories: /tmp/buildd/openms-1.11.1/contrib/include/;/opt/local/include/;/usr/local/include/
CMake Warning (dev) at cmake/OpenMSBuildSystem_macros.cmake:10 (if):
  Policy CMP0054 is not set: Only interpret if() arguments as variables or
  keywords when unquoted.  Run "cmake --help-policy CMP0054" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.

  Quoted variables like "CONTRIB_XERCESC_OPT" will no longer be dereferenced
  when the policy is set to NEW.  Since the policy is not set the OLD
  behavior will be used.
Call Stack (most recent call first):
  cmake/OpenMSBuildSystem_externalLibs.cmake:58 (OPENMS_CHECKLIB)
  CMakeLists.txt:252 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found xerces_c library (Release) at: /usr/lib/x86_64-linux-gnu/libxerces-c.so
CMake Warning (dev) at cmake/OpenMSBuildSystem_macros.cmake:18 (if):
  Policy CMP0054 is not set: Only interpret if() arguments as variables or
  keywords when unquoted.  Run "cmake --help-policy CMP0054" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.

  Quoted variables like "CONTRIB_XERCESC_DBG" will no longer be dereferenced
  when the policy is set to NEW.  Since the policy is not set the OLD
  behavior will be used.
Call Stack (most recent call first):
  cmake/OpenMSBuildSystem_externalLibs.cmake:58 (OPENMS_CHECKLIB)
  CMakeLists.txt:252 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found xerces_c library (Debug) at: /usr/lib/x86_64-linux-gnu/libxerces-c.so
-- Found GSL: /usr/include/gsl  
-- Found GSL version 2.1
-- Boost version: 1.58.0
-- Found the following Boost libraries:
--   iostreams
--   date_time
--   math_c99
--   regex
-- Found Boost version 1.58.0
-- Found SEQAN version 1.4.1
-- Looking for math.h
-- Looking for math.h - found
-- Found LibSVM: /usr/lib/libsvm.so  
-- Found LibSVM version 3.1.2
-- Found GLPK: /usr/lib/x86_64-linux-gnu/libglpk.so  
-- Found GLPK version 4.57
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8") 
-- Found zlib version 1.2.8
-- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") 
-- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so
-- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so - found
-- Found bzip2 version 1.0.6
-- Not trying to find Phonon explicitly... If you run into trouble with Qt Phonon, try to enable it in build system
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.8.7", minimum required is "4.5.0") 
-- Info: The programm svnversion could not be found. SVN-revision information will not be available! Add the location of svnversion(.exe) to your PATH environment variable if you require SVN-revision.
-- SVN revision information enabled. Use 'ENABLE_SVN=OFF' to disable!
-- Info: CF_OPENMS_DATA_PATH: /usr/share/openms-common/OpenMS/
-- Info: CF_OPENMS_DOC_PATH: /usr/share/doc/openms-doc/
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Check size of unsigned char
-- Check size of unsigned char - done
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Check size of unsigned int
-- Check size of unsigned int - done
-- Check size of unsigned long
-- Check size of unsigned long - done
-- Check size of unsigned long long
-- Check size of unsigned long long - done
-- Check size of short
-- Check size of short - done
-- Check size of int
-- Check size of int - done
-- Check size of long
-- Check size of long - done
-- Check size of long long
-- Check size of long long - done
-- Check size of int32_t
-- Check size of int32_t - done
-- Check size of int64_t
-- Check size of int64_t - done
-- Check size of uint8_t
-- Check size of uint8_t - done
-- Check size of uint64_t
-- Check size of uint64_t - done
-- Looking for C++ include unistd.h
-- Looking for C++ include unistd.h - found
-- Looking for C++ include process.h
-- Looking for C++ include process.h - not found
-- Looking for C++ include time.h
-- Looking for C++ include time.h - found
-- Looking for C++ include sys/types.h
-- Looking for C++ include sys/types.h - found
-- Looking for C++ include sys/times.h
-- Looking for C++ include sys/times.h - found
-- Looking for C++ include sys/time.h
-- Looking for C++ include sys/time.h - found
-- Looking for C++ include stdint.h
-- Looking for C++ include stdint.h - found
-- Looking for kill
-- Looking for kill - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Searching for MS2 search engines ...
--   - OMSSA not found
--   - X!Tandem not found
--   - Myrimatch not found
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.9.1") 
-- No resource file (/tmp/buildd/openms-1.11.1/source/VISUAL/APPLICATIONS/GUITOOLS/IDEvaluatorGUI.rc) found for IDEvaluatorGUI. No icon will be embedded.
-- No resource file (/tmp/buildd/openms-1.11.1/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc) found for INIFileEditor. No icon will be embedded.
-- No resource file (/tmp/buildd/openms-1.11.1/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc) found for TOPPAS. No icon will be embedded.
-- No resource file (/tmp/buildd/openms-1.11.1/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc) found for TOPPView. No icon will be embedded.
-- Official Debian packaging recognized
-- CMAKE_SKIP_RPATH: TRUE
-- 
-- -----------------------------------------------------------------
-- 
-- You have successfully configured OpenMS and TOPP.
-- 
-- For a full list of make targets execute:
-- 'make targets'
-- 
-- -----------------------------------------------------------------
-- 
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/buildd/openms-1.11.1/debian/build
VERBOSE=1 /usr/bin/make -C /tmp/buildd/openms-1.11.1/debian/build \
OpenMS TOPP UTILS GUI test_build Tutorials_build 
make[1]: Entering directory '/tmp/buildd/openms-1.11.1/debian/build'
/usr/bin/cmake -H/tmp/buildd/openms-1.11.1 -B/tmp/buildd/openms-1.11.1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/make -f CMakeFiles/Makefile2 OpenMS
make[2]: Entering directory '/tmp/buildd/openms-1.11.1/debian/build'
/usr/bin/cmake -H/tmp/buildd/openms-1.11.1 -B/tmp/buildd/openms-1.11.1/debian/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /tmp/buildd/openms-1.11.1/debian/build/CMakeFiles 25
/usr/bin/make -f CMakeFiles/Makefile2 CMakeFiles/OpenMS.dir/all
make[3]: Entering directory '/tmp/buildd/openms-1.11.1/debian/build'
/usr/bin/make -f source/TEST/CMakeFiles/svn_revision_update_forTests.dir/build.make source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend
make[4]: Entering directory '/tmp/buildd/openms-1.11.1/debian/build'
cd /tmp/buildd/openms-1.11.1/debian/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/buildd/openms-1.11.1 /tmp/buildd/openms-1.11.1/source/TEST /tmp/buildd/openms-1.11.1/debian/build /tmp/buildd/openms-1.11.1/debian/build/source/TEST /tmp/buildd/openms-1.11.1/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/DependInfo.cmake --color=
Dependee "/tmp/buildd/openms-1.11.1/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/DependInfo.cmake" is newer than depender "/tmp/buildd/openms-1.11.1/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend.internal".
Dependee "/tmp/buildd/openms-1.11.1/debian/build/source/TEST/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/tmp/buildd/openms-1.11.1/debian/build/source/TEST/CMakeFiles/svn_revision_update_forTests.dir/depend.internal".
Scanning dependencies of target svn_revision_update_forTests
make[4]: Leaving directory '/tmp/buildd/openms-1.11.1/debian/build'
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make[4]: Entering directory '/tmp/buildd/openms-1.11.1/debian/build'
cd /tmp/buildd/openms-1.11.1/debian/build/source/TEST && /usr/bin/cmake -DSOURCE_DIR=/tmp/buildd/openms-1.11.1/source/TEST -DSVN_REVISION_FILE=/tmp/buildd/openms-1.11.1/debian/build/include/OpenMS/openms_svn_revision.h -DOPENMS_HAS_SVNVERSION=OFF -DSVNVERSION_EXECUTABLE=SVNVERSION_EXECUTABLE-NOTFOUND -P /tmp/buildd/openms-1.11.1/source/TEST/../../cmake/svnversion.cmake
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Dependee "/tmp/buildd/openms-1.11.1/debian/build/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/tmp/buildd/openms-1.11.1/debian/build/CMakeFiles/OpenSwathAlgo.dir/depend.internal".
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 t -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.C
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 t -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/StatsHelpers.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/StatsHelpers.C
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/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScrip
 t -I/usr/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.C
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/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenSwathAlgo_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScrip
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[  0%] Building CXX object CMakeFiles/OpenSwathAlgo.dir/source/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/TransitionHelper.C.o
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/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramPeak.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/KERNEL/MSChromatogram.C.o
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/KERNEL/ChromatogramTools.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/AASequence.C.o
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[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIterator.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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/tmp/buildd/openms-1.11.1/source/CHEMISTRY/EdwardsLippertIterator.C: In copy constructor 'OpenMS::EdwardsLippertIterator::EdwardsLippertIterator(const OpenMS::EdwardsLippertIterator&)':
/tmp/buildd/openms-1.11.1/source/CHEMISTRY/EdwardsLippertIterator.C:134:34: warning: iteration 255ul invokes undefined behavior [-Waggressive-loop-optimizations]
       masse_[i] = source.masse_[i];
                                  ^
/tmp/buildd/openms-1.11.1/source/CHEMISTRY/EdwardsLippertIterator.C:132:24: note: containing loop
     for (Size i = 0; i < 256; i++)
                        ^
[ 28%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EdwardsLippertIteratorTryptic.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/Element.C.o
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ElementDB.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EmpiricalFormula.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/EnzymaticDigestion.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/IsotopeDistribution.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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[ 32%] Building CXX object CMakeFiles/OpenMS.dir/source/CHEMISTRY/ModificationDefinition.C.o
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/tmp/buildd/openms-1.11.1/source/FORMAT/QcMLFile.C:1248:61: warning: trigraph ??/ ignored, use -trigraphs to enable [-Wtrigraphs]
     os <<  "\t<cv uri=\"http://www.???.cvs.sourceforge.net/???/qc-cv.obo\" id=\"qc_cv_ref\" fullName=\"MS-QC\" version=\"x.y.z\"/>\n";
                                                             ^
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqQuantifier.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinInference.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ProteinResolver.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
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/tmp/buildd/openms-1.11.1/source/ANALYSIS/QUANTITATION/ProteinResolver.C: In member function 'void OpenMS::ProteinResolver::resolveID(std::vector<OpenMS::PeptideIdentification>&)':
/tmp/buildd/openms-1.11.1/source/ANALYSIS/QUANTITATION/ProteinResolver.C:120:10: warning: variable 'found_peptides' set but not used [-Wunused-but-set-variable]
     Size found_peptides;
          ^
/tmp/buildd/openms-1.11.1/source/ANALYSIS/QUANTITATION/ProteinResolver.C: In member function 'void OpenMS::ProteinResolver::resolveConsensus(OpenMS::ConsensusMap&)':
/tmp/buildd/openms-1.11.1/source/ANALYSIS/QUANTITATION/ProteinResolver.C:162:10: warning: variable 'found_peptides' set but not used [-Wunused-but-set-variable]
     Size found_peptides;
          ^
[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.C.o
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[ 52%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.C.o
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[ 56%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C: In member function 'virtual void OpenMS::PoseClusteringAffineSuperimposer::run(const OpenMS::ConsensusMap&, const OpenMS::ConsensusMap&, OpenMS::TransformationDescription&)':
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:713:16: warning: variable 'rt_low_low' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_low_low;
                ^
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:715:16: warning: variable 'rt_low_high' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_low_high;
                ^
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:716:16: warning: variable 'rt_high_low' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_high_low;
                ^
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.C:718:16: warning: variable 'rt_high_high' set but not used [-Wunused-but-set-variable]
     DoubleReal rt_high_high;
                ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C: In member function 'virtual void OpenMS::PoseClusteringShiftSuperimposer::run(const OpenMS::ConsensusMap&, const OpenMS::ConsensusMap&, OpenMS::TransformationDescription&)':
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C:344:16: warning: variable 'shift_low' set but not used [-Wunused-but-set-variable]
     DoubleReal shift_low;
                ^
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.C:346:16: warning: variable 'shift_high' set but not used [-Wunused-but-set-variable]
     DoubleReal shift_high;
                ^
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/QTClusterFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/SimplePairFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/StablePairFinder.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/StablePairFinder.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationDescription.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationDescription.C
[ 60%] Building CXX object CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o
/usr/bin/c++   -DBOOST_ALL_NO_LIB -DOpenMS_EXPORTS -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SQL_LIB -DQT_SVG_LIB -DQT_TEST_LIB -DQT_WEBKIT_LIB -DQT_XML_LIB -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2   -fopenmp -O3 -DNDEBUG -fPIC -I/usr/include/gsl -I/usr/include/libsvm -I/tmp/buildd/openms-1.11.1/include -I/tmp/buildd/openms-1.11.1/debian/build/include -I/tmp/buildd/openms-1.11.1/contrib/include -I/opt/local/include -I/usr/local/include -isystem /usr/include/qt4 -isystem /usr/include/qt4/QtOpenGL -isystem /usr/include/qt4/QtSvg -isystem /usr/include/qt4/QtWebKit -isystem /usr/include/qt4/QtTest -isystem /usr/include/qt4/QtXml -isystem /usr/include/qt4/QtSql -isystem /usr/include/qt4/QtNetwork -I/usr/include/qt4/QtDesigner -I/usr/include/qt4/QtDeclarative -I/usr/include/qt4/QtScriptTools -I/usr/include/qt4/QtDBus -I/usr/include/qt4/QtXmlPatterns -I/usr/include/qt4/QtHelp -I/usr/include/qt4/QtUiTools -I/usr/include/qt4/QtScript -I/us
 r/include/qt4/Qt3Support -I/usr/include/qt4/QtGui -I/usr/include/qt4/QtCore -I/usr/share/qt4/mkspecs/default    -Wall -Wextra -Wno-non-virtual-dtor -Wno-long-long -Wno-variadic-macros --pedantic -fPIC -o CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o -c /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C: In member function 'void OpenMS::TransformationModelBSpline::computeLinear_(double, double&, double&, double&)':
/tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C:366:70: error: too many arguments to function 'int gsl_bspline_deriv_eval(double, size_t, gsl_matrix*, gsl_bspline_workspace*)'
     gsl_bspline_deriv_eval(pos, 1, deriv, workspace_, deriv_workspace);
                                                                      ^
In file included from /tmp/buildd/openms-1.11.1/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h:40:0,
                 from /tmp/buildd/openms-1.11.1/source/ANALYSIS/MAPMATCHING/TransformationModel.C:35:
/usr/include/gsl/gsl_bspline.h:107:1: note: declared here
 gsl_bspline_deriv_eval(const double x,
 ^
CMakeFiles/OpenMS.dir/build.make:7248: recipe for target 'CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o' failed
make[4]: *** [CMakeFiles/OpenMS.dir/source/ANALYSIS/MAPMATCHING/TransformationModel.C.o] Error 1
make[4]: Leaving directory '/tmp/buildd/openms-1.11.1/debian/build'
CMakeFiles/Makefile2:4118: recipe for target 'CMakeFiles/OpenMS.dir/all' failed
make[3]: *** [CMakeFiles/OpenMS.dir/all] Error 2
make[3]: Leaving directory '/tmp/buildd/openms-1.11.1/debian/build'
CMakeFiles/Makefile2:4130: recipe for target 'CMakeFiles/OpenMS.dir/rule' failed
make[2]: *** [CMakeFiles/OpenMS.dir/rule] Error 2
make[2]: Leaving directory '/tmp/buildd/openms-1.11.1/debian/build'
Makefile:1616: recipe for target 'OpenMS' failed
make[1]: *** [OpenMS] Error 2
make[1]: Leaving directory '/tmp/buildd/openms-1.11.1/debian/build'
debian/rules:76: recipe for target 'build-arch-stamp' failed
make: *** [build-arch-stamp] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2
E: Failed autobuilding of package
W: no hooks of type C found -- ignoring
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
 -> Cleaning COW directory
  forking: rm -rf /var/cache/pbuilder/build//cow.23784 
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