[Debichem-devel] Bug#879556: ITP: beads -- 2-DE electrophoresis gel image spot detection

[Olivier Langella]

Hi Andreas,

as mentioned in my mail concerning libodsstream, I think I've solved the 
beads compilation problem.

I've also modified the beads source package to use preferentially the 
cimg header that comes from the debian repository (as you did using 
patches).
The source has been modified too to avoid my homemade cmake find script 
to look for cimg header file : no need of this if we know that we are 
using debian.

The changes are available here :
https://sourcesup.renater.fr/frs/download.php/latestfile/883/beads-1.1.18.tar.gz

thanks for you help,
kind regards
Olivier


Le 23/11/2017 à 10:18, Andreas Tille a écrit :
> Hi Olivier,
> 
> I'm moving the discussion to the debichem list.
> 
> On Tue, Nov 21, 2017 at 05:17:01PM +0100, Olivier Langella wrote:
>> sorry for the late response.
>> Yes I want to package libodsstream in debichem.
>> My upstream git repository at :
>> https://git.renater.fr/libodsstream.git
>> has not reached the debian requirements...
> 
> I have cloned this.
>   
>> I'm studying this :
>> https://www.netfort.gr.jp/~dancer/column/libpkg-guide/libpkg-guide.html
>> is it a good start ?
> 
> Hmmm, may be we start with a proper watch file that enables downloading
> the current version of the source tarball.  I was not able to build
> since I have no idea how to get this.
> 
>> and I'm trying to use gbp as described here :
>> http://honk.sigxcpu.org/projects/git-buildpackage/manual-html/gbp.html
> 
> I shamelessly like to point to the Debian Med policy
> 
>     https://debian-med.alioth.debian.org/docs/policy.html
> 
> which contains links to beginners doku and lots of things how to work on
> alioth.  Unfortunately there is no DebiChem policy (at least I'm not
> aware of it) but if you replace s/debian-med/debichem/ most things apply.
> 
> Just let me know how to get the source tarball and I'll give you a
> kickstart.
> 
> Kind regards
> 
>         Andreas.
> 

-- 
Olivier Langella
http://pappso.inra.fr/bioinfo
Génétique Quantitative et Évolution - Le Moulon
INRA - Université Paris-Sud - CNRS - AgroParisTech
Ferme du Moulon
91190 Gif-sur-Yvette, France
Tel : 01.69.33.23.68  Fax : 01.69.33.23.40
JID : olivier.langella at u-psud.fr