[Debichem-devel] Bug#980634: Bug#980634: gromacs: FTBFS: Errors while running CTest

[Nicholas Breen]

reassign 980634 src:mpich 3.4-4
affects 980634 src:gromacs
close 980634 3.4-5
thanks

On Wed, Jan 20, 2021 at 09:41:19PM +0100, Lucas Nussbaum wrote:
> Source: gromacs
> Version: 2020.4-2
> Severity: serious
> Justification: FTBFS on amd64
> Tags: bullseye sid ftbfs
> Usertags: ftbfs-20210120 ftbfs-bullseye
> 
> Hi,
> 
> During a rebuild of all packages in sid, your package failed to build
> on amd64.
[...]
> >  1/30 Test  #1: TestUtilsUnitTests ...............***Exception: SegFault  0.10 sec
> > [1611165257.171056] [ip-172-31-13-129:15115:0]      rdmacm_cm.c:638  UCX  ERROR rdma_create_event_channel failed: No such device
> > [1611165257.171089] [ip-172-31-13-129:15115:0]     ucp_worker.c:1432 UCX  ERROR failed to open CM on component rdmacm with status Input/output error
[...]
> If you reassign this bug to another package, please marking it as 'affects'-ing
> this package. See https://www.debian.org/Bugs/server-control#affects

Reassigning to mpich and then closing, for the sake of bug tracking -
building against 3.4-4 fails, but the 3.4-5 upload from earlier today
resolves this bug (thanks Alistair!).

It's possible that this is another iteration of #980033 on ucx, except
that it affected MPICH instead of OpenMPI here.  Not sure enough about
that to merge the bugs.  I can successfully build the OpenMPI portion of
gromacs in sid right now.


-- 
Nicholas Breen
nbreen at debian.org