[Debichem-devel] Bug#1003005: elkcode FTBFS with libxc 5.1.7

Adrian Bunk bunk at debian.org
Sun Jan 2 17:00:47 GMT 2022


Source: elkcode
Version: 6.3.2-2
Severity: serious
Tags: ftbfs bookworm sid
Control: close -1 7.2.42-1

https://buildd.debian.org/status/package.php?p=elkcode&suite=sid

...
mpif90 `dpkg-buildflags --get FFLAGS` `dpkg-buildflags --get CPPFLAGS` -Wall -ffast-math -funroll-loops -fopenmp -fallow-argument-mismatch `dpkg-buildflags --get LDFLAGS` -o elk modmain.o modmpi.o libxc_funcs.o libxc.o libxcifc.o modxcifc.o modfxcifc.o moddftu.o modrdm.o modphonon.o modscdft.o modtest.o modrandom.o modstore.o modpw.o modvars.o modtddft.o modgw.o modulr.o modjx.o modomp.o mkl_stub.o mkl_init.o oblas_stub.o oblas_init.o blis_stub.o blis_init.o w90_stub.o modw90.o zfftifc_fftw.o elk.o zbsht.o zfsht.o rbsht.o rfsht.o projsbf.o fsmooth.o nfftifc.o rfinp.o splint.o spline.o wsplint.o wsplintp.o splintwp.o sphcover.o r3frac.o genvsig.o gencfun.o zfpack.o addlorbcnd.o rfint.o sortidx.o gengkvec.o pade.o pades.o rfint0.o zfinp.o symrvf.o genapwfr.o rfcopy.o rhomagsh.o genylmg.o olpaa.o readfermi.o factr.o writechg.o zflmconj.o rminv.o zminv.o rlmrot.o rotrflm.o ztorflm.o rotzflm.o rfmtlm.o genzrm.o gensfacgp.o zmctmu.o zmctm.o hmlfv.o olpfv.o axangsu2.o checkmt.o symrf.o z2mm.o z2mctm.o z2mmct.o writefermi.o findnjcmax.o findscq.o plot1d.o plot2d.o plot3d.o hmllolo.o olprad.o occupy.o findkpt.o zfmtint.o rotrfmt.o forcek.o eveqnfvr.o findsym.o genvbmatk.o wigner3jf.o wigner6j.o mixbroyden.o zftrf.o gensocfr.o getcfgq.o wigner3j.o moke.o sfacinit.o sfacrho.o sfacmag.o gradwfcr2.o symrvfmt.o oepmain.o oepresk.o oepvcl.o oepvclk.o dbxcplot.o writehmlbse.o hmldbse.o hmldbsek.o dielectric_bse.o genidxbse.o writeevbse.o genwfpw.o writewfpw.o getwfpw.o genexpmat.o elnes.o potefield.o eulerrot.o fermisurfbxsf.o symmetry.o findsymcrys.o findsymsite.o plotpt1d.o writedos.o findprimcell.o proj2d.o nonlinopt.o vecplot.o wfcrplot.o energykncr.o eveqnss.o gendmatk.o gensdmat.o ggamt_1.o ggair_1.o ggamt_sp_1.o ggair_sp_1.o ggamt_2a.o ggair_2a.o ggamt_2b.o ggair_2b.o ggamt_sp_2a.o ggair_sp_2a.o ggamt_sp_2b.o ggair_sp_2b.o genspecies.o writeemd.o writeexpmat.o rotdmat.o hrmdmat.o reademd.o emdplot.o rfhkintp.o emdplot3d.o emdplot2d.o emdplot1d.o plotpt3d.o plotpt2d.o writeevsp.o torque.o ssfsmjx.o wxcplot.o effmass.o genlmirep.o ssfext.o sstask.o spiralsc.o genscss.o genfspecies.o writespecies.o exxengy.o exxengyk.o xc_c_tb09.o elfplot.o potplot.o mae.o writestate.o readstate.o rotaxang.o axangrot.o dmatls.o gendmat.o numlist.o sbesseldm.o genvchi0.o genspchi0.o vclcore.o hmlxbse.o hmlxbsek.o genvmatk.o writeepsinv.o putepsinv.o curden.o curdenk.o hflocal.o dielectric.o bdipole.o roteuler.o lopzflm.o eveqnfvz.o rhomag.o hmlaa.o hmlalo.o gencore.o gentau.o gentauk.o hmlistl.o olpistl.o gengclg.o hmlrad.o rhonorm.o rfmtsm.o olplolo.o genshtmat.o allatoms.o rtozflm.o rtozfmt.o gauntyry.o fderiv.o moment.o sctovec.o match.o writeinfo.o rfpack.o gaunt.o readinput.o ztorfmt.o putevecfv.o zfmtinp.o zfcmtinp.o writelinen.o writekpts.o rfmtinp.o brzint.o rhocore.o writelat.o mtdmin.o atpstep.o potcoul.o zfmtconj.o symrfmt.o putpmat.o eveqnz.o olpalo.o checkfsm.o rhoplot.o potnucl.o potxc.o erf.o gradzf.o writegeom.o linengy.o bandstr.o gengvc.o gengclq.o closefiles.o writefsm.o eveqn.o rhomagk.o factnm.o atom.o radnucl.o charge.o genrmesh.o genapwlofr.o wavefmt.o genzrho.o potks.o sbessel.o clebgor.o hermite.o findband.o genbs.o gencfrc.o genws.o chargemt.o gndstate.o addbfsm.o initoep.o orthevsv.o fermisurf.o findswidth.o gradrf.o dos.o gradzfmt.o nuclei.o writesym.o zftzf.o polynm.o rdirac.o zfmtftoc.o rfmtftoc.o gradrfmt.o genzvclmt.o getevalfv.o mixlinear.o gengvec.o putevalfv.o rfmtpack.o zfmtpack.o writestrain.o writeforces.o r3mv.o r3mtv.o r3cross.o r3minv.o r3mdet.o r3mm.o r3mtm.o r3mmt.o r3vo.o symvec.o curdenplot.o hartfock.o eveqnhf.o zpotclmt.o genlofr.o rfinpc.o eveqnit.o genzfrm.o gengqrf.o writepmat.o genwfsv.o writelsj.o writesf.o rzfinp.o genjlgprmt.o gridsize.o sphcrd.o writeiad.o readspecies.o i3mtv.o writeeval.o i3minv.o i3mdet.o genevfsv.o getpmat.o timesec.o mixpack.o mixerifc.o symmat.o rhoinit.o maginit.o rvfcross.o eveqnfv.o energynn.o rfinterp.o rfplot.o geomopt.o ylmroty.o ylmrot.o gcd.o sdelta.o stheta.o sdelta_mp.o stheta_mp.o sdelta_fd.o stheta_fd.o sdelta_sq.o stheta_sq.o sdelta_lr.o stheta_lr.o mossbauer.o gentpmae.o symveca.o massnucl.o wavefcr.o gradwf2.o geomplot.o findngkmax.o reciplat.o genrlmv.o genvmat.o putoccsv.o getoccsv.o curlrvf.o latvstep.o energy.o delevec.o rdiracint.o rzfmtinp.o genstrain.o genstress.o writestress.o rschrodint.o mixadapt.o genffacgp.o genidxlo.o writeengy.o genpmatk.o putevecsv.o getevecsv.o writegclq.o putevalsv.o genppts.o force.o vecfbz.o rfirsm.o gengclgq.o findsymlat.o grad2rfmt.o findqpt.o zftwfir.o symrfir.o symrvfir.o getevalsv.o genjlgpr.o init0.o init1.o init2.o init3.o init4.o genpmat.o putkmat.o getkmat.o genkmat.o genexpmt.o epsinv.o getevecfv.o zfmtctof.o wfplot.o straingkq.o symdmat.o genylmv.o nesting.o eveqnsv.o fsmbfield.o writeqpts.o writemom.o rndevsv.o genwfsvp.o genolpq.o gensmatk.o gentaucr.o potxcmt.o potxcir.o genvmmtsv.o zpotcoul.o genhvec.o rfmtctof.o testcheck.o writeefg.o eveqnbf.o zfplot.o phdelete.o dmatch.o phscdelete.o doccupy.o writedvs.o gengqvec.o readdyn.o dyntask.o drhomagsh.o gendvsig.o gradrhomt.o gendcfun.o dpotks.o dpotxc.o dwavefmt.o dhmlistl.o phmixpack.o dhmlaa.o deveqnfv.o dolpalo.o dhmlalo.o dhmllolo.o dpotcoul.o drhomagk.o gengvsmt.o dforce.o dhmlrad.o dolpistl.o gendwfsv.o dforcek.o dynqtor.o dynevs.o phonon.o dynrtoq.o hmlaaq.o mcmillan.o genephmat.o dolpaa.o hmlaloq.o olpaaq.o olpaloq.o gengkqvec.o genmcph.o putdevecfv.o getdevecfv.o putdevecsv.o getdevecsv.o phononsc.o genscph.o phdisp.o dynsymapp.o dynsym.o dynev.o phdos.o sumrule.o writephn.o phfext.o writegamma.o readgamma.o phlwidth.o alpha2f.o writelambda.o ephcouple.o eliashberg.o phscdvs.o readdvs.o readalpha2f.o gendsocfr.o xc_pzca.o xc_pwca.o xc_pbe.o xc_am05.o xc_xalpha.o xc_wc06.o x_wc06.o x_pbe.o c_pbe.o c_pbe_gcor.o xc_vbh.o fxc_pwca.o gendmatmt.o genveedu.o genvmatmt.o writedftu.o readalphadu.o fyukawa.o fyukawa0.o genfdufr.o energyfdu.o writeefdu.o zbessela.o zbesselb.o readdmatmt.o genfdu.o findlambdadu.o readfdu.o writetmdu.o writetm2du.o writetm3du.o dmtotm2.o dmtotm3.o tm2todm.o tm3todm.o pottm2.o pottm3.o tm2pol.o tm3pol.o gendmftm.o ftmfield.o writeftm.o genvclijji.o rdmft.o rdmdkdc.o rdmminc.o rdmvaryc.o rdmdedc.o rdmenergy.o rdmengyxc.o rdmwritededn.o rdmwriteengy.o rdmminn.o rdmvaryn.o rdmdedn.o rdmdexcdn.o genvclijjk.o getvclijji.o getvclijjk.o writevclijji.o writevclijjk.o rdmdexcdc.o rdmdtsdn.o rdmentropy.o rdmeval.o gwrhomag.o gwdmat.o gwdmatk.o ksinvert.o gwefermi.o dysonr.o gwlocal.o gwsefm.o putgwsefm.o getgwsefm.o writeigw.o polefit.o genwgw.o gwchgk.o gwsefmk.o gwspecf.o writegwsf.o acgwse.o minf_nm.o fmin_nm.o acpole.o zfpole.o gwbandstr.o gtwsum.o gwscrho.o tddftlr.o potkst.o genhmlt.o timestep.o writetddos.o gentimes.o writeafpdt.o writetimes.o readtimes.o readafieldt.o tddft.o genvfxc.o genfxcr.o tdtemp.o writetdlsj.o genspfxcr.o genvfxcg.o tdbackup.o tddftsplr.o genspfxcg.o genafieldt.o writetddft.o dielectric_tdrt.o readcurrent.o writeinfou.o writemomrmt.o writeevalu.o chargeu.o writestulr.o eveqnulr.o occupyulr.o momentu.o addbfsmu.o mixpacku.o potuinit.o vclqinit.o writechgrmt.o rfzfftq.o readstulr.o genzvmatk.o genzvbmatk.o gndstulr.o genkpakq.o rhomaguk.o writeengyu.o genhmlu.o initulr.o potcoulu.o potksu.o potxcu.o rhomagq.o potefieldu.o plotulr.o plotu1d.o plotu2d.o plotu3d.o rhouplot.o potuplot.o rhocoreu.o maguplot.o writevclr.o readvclr.o initw90.o writew90.o writew90win.o writew90eig.o setupw90.o writew90mmn.o writew90spn.o putephmat.o getephmat.o gndsteph.o eveqneph.o  -llapack -lblas `pkg-config --cflags --libs fftw3` \
    `pkg-config --cflags --libs libxc` -lxcf90 
/usr/bin/ld: libxcifc.o: in function `__libxcifc_MOD_xcdata_libxc':
./libxcifc.f90:390: undefined reference to `xc_f90_version_'
/usr/bin/ld: ./libxcifc.f90:407: undefined reference to `xc_f90_func_init_'
/usr/bin/ld: ./libxcifc.f90:408: undefined reference to `xc_f90_info_name_'
/usr/bin/ld: ./libxcifc.f90:409: undefined reference to `xc_f90_family_from_id_'
/usr/bin/ld: ./libxcifc.f90:414: undefined reference to `xc_f90_func_end_'
/usr/bin/ld: ./libxcifc.f90:435: undefined reference to `xc_f90_info_flags_'
/usr/bin/ld: ./libxcifc.f90:411: undefined reference to `xc_f90_hyb_exx_coef_'
/usr/bin/ld: libxcifc.o: in function `__libxcifc_MOD_fxcifc_libxc':
./libxcifc.f90:342: undefined reference to `xc_f90_family_from_id_'
/usr/bin/ld: ./libxcifc.f90:344: undefined reference to `xc_f90_func_init_'
/usr/bin/ld: ./libxcifc.f90:352: undefined reference to `xc_f90_lda_fxc_'
/usr/bin/ld: ./libxcifc.f90:358: undefined reference to `xc_f90_lda_fxc_'
/usr/bin/ld: libxcifc.o: in function `__libxcifc_MOD_xcifc_libxc':
./libxcifc.f90:129: undefined reference to `xc_f90_family_from_id_'
/usr/bin/ld: ./libxcifc.f90:131: undefined reference to `xc_f90_func_init_'
/usr/bin/ld: ./libxcifc.f90:155: undefined reference to `xc_f90_lda_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:185: undefined reference to `xc_f90_gga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:203: undefined reference to `xc_f90_func_set_ext_params_'
/usr/bin/ld: ./libxcifc.f90:247: undefined reference to `xc_f90_mgga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:284: undefined reference to `xc_f90_func_end_'
/usr/bin/ld: ./libxcifc.f90:171: undefined reference to `xc_f90_gga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:159: undefined reference to `xc_f90_lda_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:191: undefined reference to `xc_f90_gga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:139: undefined reference to `xc_f90_func_set_ext_params_'
/usr/bin/ld: ./libxcifc.f90:251: undefined reference to `xc_f90_mgga_vxc_'
/usr/bin/ld: ./libxcifc.f90:144: undefined reference to `xc_f90_lda_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:269: undefined reference to `xc_f90_mgga_vxc_'
/usr/bin/ld: ./libxcifc.f90:216: undefined reference to `xc_f90_mgga_vxc_'
/usr/bin/ld: ./libxcifc.f90:177: undefined reference to `xc_f90_gga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:148: undefined reference to `xc_f90_lda_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:263: undefined reference to `xc_f90_mgga_exc_vxc_'
/usr/bin/ld: ./libxcifc.f90:236: undefined reference to `xc_f90_mgga_vxc_'
/usr/bin/ld: ./libxcifc.f90:229: undefined reference to `xc_f90_mgga_exc_vxc_'
collect2: error: ld returned 1 exit status
make[3]: *** [Makefile:200: elk] Error 1


This is already fixed in the version in experimental.



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