[Debichem-devel] apbs_3.4.1-1_amd64.changes ACCEPTED into unstable, unstable

Debian FTP Masters ftpmaster at ftp-master.debian.org
Mon May 30 20:00:11 BST 2022 


Accepted:

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Hash: SHA256

Format: 1.8
Date: Sun, 29 May 2022 10:42:09 +0200
Source: apbs
Binary: apbs apbs-data apbs-dbgsym apbs-doc libapbs-dev libapbs3 libapbs3-dbgsym libfetk-dev libfetk1.9 libfetk1.9-dbgsym python3-apbslib python3-apbslib-dbgsym
Architecture: source all amd64
Version: 3.4.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel at lists.alioth.debian.org>
Changed-By: Drew Parsons <dparsons at debian.org>
Description:
 apbs       - Adaptive Poisson Boltzmann Solver
 apbs-data  - data files for APBS (Adaptive Poisson Boltzmann Solver)
 apbs-doc   - Adaptive Poisson Boltzmann Solver
 libapbs-dev - Adaptive Poisson Boltzmann Solver
 libapbs3   - Adaptive Poisson Boltzmann Solver
 libfetk-dev - FETK libraries for APBS (development headers)
 libfetk1.9 - FETK libraries for APBS (shared libraries)
 python3-apbslib - Adaptive Poisson Boltzmann Solver
Changes:
 apbs (3.4.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream release.
     - requires FETK
     - Build-Depends: pybuild-plugin-pyproject, python3-pybind11
     - drop deprecated debian patches debian_make.patch and
       link_libapbs_routines.patch
   * provide FETK external source as a git subtree in
     debian/external_deps/fetk. Source is pulled from
     https://github.com/Electrostatics/FETK, the required
     version is specified in the toplevel apbs CMakeLists.txt
     - pull FETK 1.9.3 (commit 57195e5) to use system SuperLU
     - patch to use system maloc (don't build local maloc)
     - patch mc and punc with BLA_STATIC OFF to used BLAS shared
       libraries, and don't specify BLA_VENDOR OpenBLAS (use generic
       blas to allow for alternative optimised BLASes)
     - build FETK libraries (libmc.so, libgamer.so, libpunc.so,
       also punc components libcgcode.so, libvf2c.so)
       with soname set by FETK project minor version (currently 1.9)
     - provide FETK libraries in libfetk-dev and libfetk1.9 packages.
     - FETK copyright licence is LGPL-2.1+
     - Build-Depends: libsuitesparse-dev (for libumfpack),
       libarpack2-dev
   * python3-apbslib provides both apbs and apbslib python modules
   * update debian/rules
     - specify cmake build with source at top level
     - specify APBS_STATIC_BUILD=Off
   * update debian patch python3.patch to fix check of PYTHON_MAX_VERSION
     and only copy python library files to a pdb2pka dir it exists
   * add debian patch cmake.patch
     - adjusts upstream cmake files to install headers in
       /usr/include/apbs, and don't install (unformed) docs
     - add RPC_CFLAGS (/usr/include/tirpc) to CFLAGS in
       ImportFETK.cmake to include FETK RPC support.
       Build-Depends: libtirpc-dev (using pkg-config)
     - treat PYTHON_VERSION (3.6) as minimum not exact version
     - skip RPATH in shared library build (CMAKE_SKIP_RPATH=ON)
   * provide apbs-doc package
     - build user docs with sphinxdoc, libjs-mathjax
     - Build-Depends-Indep: python3-sphinx-rtd-theme
   * fix ©,Å symbols with UTF-8 via debian patch
     fix_spelling_errors.patch and direct in FETK
   * add apbs_check_intermediate_energies.py to
     debian patch wrong-path-for-interpreter.patch and replace with
     "env python3" as needed (following upstream more closely)
   * update upstream source to https://github.com/Electrostatics/apbs
   * upstream source no longer includes pdb2pqr, don't need to
     exclude it and repackage the source (drop +dfsg1)
   * Standards-Version: 4.6.0
   * lintian updates
Checksums-Sha1:
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 584fd36dc1424cb22fd8846f1cf2c7ead60ce0c6 85806314 apbs_3.4.1.orig.tar.gz
 2286bbf544a97ced2d15876a7a3360f1aaaa2449 20288384 apbs_3.4.1-1.debian.tar.xz
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 acf4f5062e48aa48d2ca09e192fd179c28cebb5e 114460 apbs-dbgsym_3.4.1-1_amd64.deb
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 38db2e65ab04a88df91b59852e788c2a470293c0 104968 libapbs-dev_3.4.1-1_amd64.deb
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 c8c883311ecaf3b9cfa6afe2ab6cf509059f127a 256168 libapbs3_3.4.1-1_amd64.deb
 59f6fd30b8e443429fe64e6ca00d9e5216dd0600 150568 libfetk-dev_3.4.1-1_amd64.deb
 996f60a5ad6bd5016917d3fbadbada5fc769d354 1811024 libfetk1.9-dbgsym_3.4.1-1_amd64.deb
 2b52e8f2339e33f4e059e8e34dd0ce5b04e38325 556956 libfetk1.9_3.4.1-1_amd64.deb
 73917c7b51b7dbd6f1acc3f24e5479afe3743732 3176932 python3-apbslib-dbgsym_3.4.1-1_amd64.deb
 3ae78af9cca0f8ca7642c088e299ddadf556dccd 206452 python3-apbslib_3.4.1-1_amd64.deb
Checksums-Sha256:
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 644e6246fd37c9dd4172fc7be1763337082ab8584dbcd53e738c831b62c89bb2 85806314 apbs_3.4.1.orig.tar.gz
 22393d93ee5d1a17a6cb6f9a311e541ccf8ace1c8778135ec87254640498256d 20288384 apbs_3.4.1-1.debian.tar.xz
 a939c03980149d4c731337c3b78b5d7c2dcea666f7a54f6eb664ed43c823585e 1485848 apbs-data_3.4.1-1_all.deb
 6bb96201f528819648a007d56e27a3ca00a0201886cec08e340dee6cb655eae9 114460 apbs-dbgsym_3.4.1-1_amd64.deb
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Files:
 d39b761e35cd4b98296ad2c9afb2ba1b 2625 science optional apbs_3.4.1-1.dsc
 5d2af7c3592f8c410a5df39887361520 85806314 science optional apbs_3.4.1.orig.tar.gz
 8be66dc882d838390020e15612fd3b34 20288384 science optional apbs_3.4.1-1.debian.tar.xz
 8410ba3dd02c6e85de9a4482540dfb84 1485848 science optional apbs-data_3.4.1-1_all.deb
 473c9d2f9da4e74911973ff505b14294 114460 debug optional apbs-dbgsym_3.4.1-1_amd64.deb
 4dcb06b785deb3308d711f75f6758690 5848060 science optional apbs-doc_3.4.1-1_all.deb
 e0dab252e2a9235b07a00ed150455475 14595 science optional apbs_3.4.1-1_amd64.buildinfo
 fa5e97cd7443cf8e34a8140bcf5113c1 80544 science optional apbs_3.4.1-1_amd64.deb
 accb13d5e7648f175f1f2c5de4e44f3b 104968 libdevel optional libapbs-dev_3.4.1-1_amd64.deb
 bb89cae61b44ce9ee913725df76b1369 607084 debug optional libapbs3-dbgsym_3.4.1-1_amd64.deb
 172e12493b230509b9b1081849e37107 256168 libs optional libapbs3_3.4.1-1_amd64.deb
 a3df216f1a8ee63ef559684f7641082b 150568 libdevel optional libfetk-dev_3.4.1-1_amd64.deb
 fc811fe755b16b82955d9a0c74ff3155 1811024 debug optional libfetk1.9-dbgsym_3.4.1-1_amd64.deb
 61489632524804c2fb196bae6aa53d6e 556956 libs optional libfetk1.9_3.4.1-1_amd64.deb
 bb127c75b8c0ac14798f59f8e3baea21 3176932 debug optional python3-apbslib-dbgsym_3.4.1-1_amd64.deb
 af4e692723eb22ff01cceeaefff9d850 206452 python optional python3-apbslib_3.4.1-1_amd64.deb

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