[Debichem-devel] Bug#1045317: libpwizlite: Fails to build source after successful build

[Lucas Nussbaum]

Source: libpwizlite
Version: 3.0.5-1
Severity: minor
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-sab-20230813 ftbfs-source-after-build
User: debian-qa at lists.debian.org
Usertags: qa-doublebuild

Hi,

This package fails to build a source package after a successful build
(dpkg-buildpackage ; dpkg-buildpackage -S).

This is probably a clear violation of Debian Policy section 4.9 (clean target),
but this is filed as severity:minor for now, because a discussion on
debian-devel showed that we might want to revisit the requirement of a working
'clean' target.

More information about this class of issues, included common problems and
solutions, is available at
https://wiki.debian.org/qa.debian.org/FTBFS/SourceAfterBuild

Relevant part of the build log:
> cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S
> -----------------------------------------------------------------------------------------------------------------------------
> 
> dpkg-buildpackage: info: source package libpwizlite
> dpkg-buildpackage: info: source version 3.0.5-1
> dpkg-buildpackage: info: source distribution unstable
> dpkg-buildpackage: info: source changed by Filippo Rusconi <lopippo at debian.org>
>  dpkg-source --before-build .
>  fakeroot debian/rules clean
> dh clean --build-system=cmake
>    debian/rules override_dh_auto_clean
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> rm -f debian/libpwizlite.3
> rm -rf debian/includes
> dh_clean
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
>    dh_autoreconf_clean -O--build-system=cmake
>    dh_clean -O--build-system=cmake
>  dpkg-source -b .
> dpkg-source: info: using source format '3.0 (quilt)'
> dpkg-source: info: building libpwizlite using existing ./libpwizlite_3.0.5.orig.tar.gz
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/libpwizlite.so.3:
> dpkg-source: error:   new version is symlink to libpwizlite.so.3.0.5
> dpkg-source: error:   old version is nonexistent
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/libpwizlite.so:
> dpkg-source: error:   new version is symlink to libpwizlite.so.3
> dpkg-source: error:   old version is nonexistent
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_C.bin: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_C.bin in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_C.bin' will not be represented in diff
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_CXX.bin: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_CXX.bin in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CMakeDetermineCompilerABI_CXX.bin' will not be represented in diff
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdC/a.out: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdC/a.out in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdC/a.out' will not be represented in diff
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdCXX/a.out: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdCXX/a.out in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'obj-x86_64-linux-gnu/CMakeFiles/3.27.2/CompilerIdCXX/a.out' will not be represented in diff
> dpkg-source: warning: file libpwizlite-3.0.5/obj-x86_64-linux-gnu/compile_commands.json has no final newline (either original or modified version)
> dpkg-source: warning: file libpwizlite-3.0.5/obj-x86_64-linux-gnu/install_manifest.txt has no final newline (either original or modified version)
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/libpwizlite.a: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/libpwizlite.a in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: error: cannot represent change to obj-x86_64-linux-gnu/src/libpwizlite.so.3.0.5: binary file contents changed
> dpkg-source: error: add obj-x86_64-linux-gnu/src/libpwizlite.so.3.0.5 in debian/source/include-binaries if you want to store the modified binary in the debian tarball
> dpkg-source: warning: executable mode 0755 of 'obj-x86_64-linux-gnu/src/libpwizlite.so.3.0.5' will not be represented in diff
> dpkg-source: error: unrepresentable changes to source
> dpkg-buildpackage: error: dpkg-source -b . subprocess returned exit status 1
> 
> E: Command 'cd /<<PKGBUILDDIR>> && runuser -u user42 -- dpkg-buildpackage --sanitize-env -us -uc -rfakeroot -S' failed to run.


The full build log is available from:
http://qa-logs.debian.net/2023/08/13/libpwizlite_3.0.5-1_unstable.log

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.