[Debichem-devel] Bug#1054790: rdkit: FTBFS: make[1]: *** [debian/rules:88: override_dh_auto_configure] Error 2

Fri Oct 27 20:35:57 BST 2023

Source: rdkit
Version: 202303.3-3
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20231027 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.

Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DPYTHON_EXECUTABLE=/usr/bin/python3.11 ../
> 	cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DPYTHON_EXECUTABLE=/usr/bin/python3.11 ../ ..
> -- The C compiler identification is GNU 13.2.0
> -- The CXX compiler identification is GNU 13.2.0
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Check for working C compiler: /usr/bin/cc - skipped
> -- Detecting C compile features
> -- Detecting C compile features - done
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- Check for working CXX compiler: /usr/bin/c++ - skipped
> -- Detecting CXX compile features
> -- Detecting CXX compile features - done
> -- Catch not found in /usr/include/catch2
> Downloading https://github.com/catchorg/Catch2/archive/v2.13.8.tar.gz...
> CMake Error at External/catch/CMakeLists.txt:22 (file):
>   file RENAME failed to rename
> 
>     /<<PKGBUILDDIR>>/External/catch/Catch2-2.13.8
> 
>   to
> 
>     /usr/include/catch2
> 
>   because: Invalid cross-device link
> 
> 
> 
> CATCH: /usr/include/catch2/single_include/catch2
> CMake Warning (dev) at CMakeLists.txt:276 (find_package):
>   Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
>   are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
>   the cmake_policy command to set the policy and suppress this warning.
> 
> This warning is for project developers.  Use -Wno-dev to suppress it.
> 
> -- Found PythonInterp: /usr/bin/python3.11 (found version "3.11.6") 
> CMake Warning (dev) at CMakeLists.txt:285 (find_package):
>   Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
>   are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
>   the cmake_policy command to set the policy and suppress this warning.
> 
> This warning is for project developers.  Use -Wno-dev to suppress it.
> 
> -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython3.11.so (found version "3.11.6") 
> CMake Warning (dev) at Code/cmake/Modules/FindNumPy.cmake:10 (find_package):
>   Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
>   are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
>   the cmake_policy command to set the policy and suppress this warning.
> 
> Call Stack (most recent call first):
>   CMakeLists.txt:300 (find_package)
> This warning is for project developers.  Use -Wno-dev to suppress it.
> 
> CMake Warning at /usr/share/cmake-3.27/Modules/FindBoost.cmake:2233 (message):
>   No header defined for python-py311; skipping header check (note:
>   header-only libraries have no designated component)
> Call Stack (most recent call first):
>   CMakeLists.txt:314 (find_package)
> 
> 
> Python Install directory /usr/lib/python3.11/site-packages
> PYTHON Py_ENABLE_SHARED: 1
> PYTHON USING LINK LINE: -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2
> nbval not found, disabling the jupyter tests
> -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") 
> -- Performing Test CMAKE_HAVE_LIBC_PTHREAD
> -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
> -- Found Threads: TRUE  
> -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system serialization iostreams regex 
> == Using strict rotor definition
> -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system iostreams regex 
> -- maeparser include dir set as '/usr/include'
> -- maeparser libraries set as '/usr/lib/x86_64-linux-gnu/libmaeparser.so'
> -- Found maeparser: /usr/include  
> -- coordgen include dir set as /usr/include
> -- coordgen libraries set as '/usr/lib/x86_64-linux-gnu/libcoordgen.so'
> -- Found coordgen: /usr/include  
> -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: iostreams regex 
> -- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system iostreams regex 
> -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.13")  
> CMake Warning (dev) at Code/GraphMol/FilterCatalog/CMakeLists.txt:8 (find_package):
>   Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
>   are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
>   the cmake_policy command to set the policy and suppress this warning.
> 
> This warning is for project developers.  Use -Wno-dev to suppress it.
> 
> -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") 
> -- Found Cairo: /usr/include/cairo  
> -- Found Freetype: /usr/lib/x86_64-linux-gnu/libfreetype.so (found version "2.13.2") 
> -- Could NOT find Boost (missing: program_options) (found suitable version "1.74.0", minimum required is "1.58.0")
> -- Configuring incomplete, errors occurred!
> 	cd obj-x86_64-linux-gnu && tail -v -n \+0 CMakeCache.txt
> ==> CMakeCache.txt <==
> # This is the CMakeCache file.
> # For build in directory: /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
> # It was generated by CMake: /usr/bin/cmake
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> # If you do not want to change any of the values, simply exit the editor.
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> 
> //Build the testing tree.
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> //Path to a file.
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> //No help, variable specified on the command line.
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> Boost_PYTHON-PY311_LIBRARY_DEBUG:FILEPATH=Boost_PYTHON-PY311_LIBRARY_DEBUG-NOTFOUND
> 
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> Boost_PYTHON-PY311_LIBRARY_RELEASE:FILEPATH=Boost_PYTHON-PY311_LIBRARY_RELEASE-NOTFOUND
> 
> //Boost python311 library (debug)
> Boost_PYTHON311_LIBRARY_DEBUG:FILEPATH=/usr/lib/x86_64-linux-gnu/libboost_python311.so
> 
> //Boost python311 library (release)
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> Boost_SERIALIZATION_LIBRARY_RELEASE:FILEPATH=/usr/lib/x86_64-linux-gnu/libboost_serialization.so
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> 
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> 
> //No help, variable specified on the command line.
> CATCH_DIR:UNINITIALIZED=/usr/include/catch2
> 
> //Dependencies for the target
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> //No help, variable specified on the command line.
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> //Path to a program.
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> 
> //Flags used by the linker during the creation of modules during
> // all build types.
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> // DEBUG builds.
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> //Flags used by the linker during the creation of modules during
> // MINSIZEREL builds.
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> //Flags used by the linker during the creation of modules during
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> //Flags used by the linker during the creation of modules during
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> //Flags used by the linker during the creation of shared libraries
> // during all build types.
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> //Flags used by the linker during the creation of shared libraries
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> 
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> 
> //Dependencies for the target
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> 
> //Dependencies for the target
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> 
> //Dependencies for the target
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> 
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> 
> //Dependencies for the target
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> 
> //Dependencies for the target
> DistGeometry_LIB_DEPENDS:STATIC=general;EigenSolvers;general;ForceField;general;ForceFieldHelpers;
> 
> //Path to a file.
> EIGEN3_INCLUDE_DIR:PATH=/usr/include/eigen3
> 
> //The directory containing a CMake configuration file for Eigen3.
> Eigen3_DIR:PATH=Eigen3_DIR-NOTFOUND
> 
> //Dependencies for the target
> EigenSolvers_LIB_DEPENDS:STATIC=general;RDGeneral;
> 
> //No help, variable specified on the command line.
> FETCHCONTENT_FULLY_DISCONNECTED:UNINITIALIZED=ON
> 
> //Dependencies for the target
> FMCS_LIB_DEPENDS:STATIC=general;Depictor;general;SmilesParse;general;FileParsers;general;ChemTransforms;general;SubstructMatch;general;GraphMol;
> 
> //Path to a file.
> FREETYPE_INCLUDE_DIR_freetype2:PATH=/usr/include/freetype2
> 
> //Path to a file.
> FREETYPE_INCLUDE_DIR_ft2build:PATH=/usr/include/freetype2
> 
> //Path to a library.
> FREETYPE_LIBRARY_DEBUG:FILEPATH=FREETYPE_LIBRARY_DEBUG-NOTFOUND
> 
> //Path to a library.
> FREETYPE_LIBRARY_RELEASE:FILEPATH=/usr/lib/x86_64-linux-gnu/libfreetype.so
> 
> //Dependencies for the target
> FileParsers_LIB_DEPENDS:STATIC=general;GenericGroups;general;Depictor;general;SmilesParse;general;ChemTransforms;general;GraphMol;general;/usr/lib/x86_64-linux-gnu/libmaeparser.so;general;/usr/lib/x86_64-linux-gnu/libboost_system.so;general;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;general;/usr/lib/x86_64-linux-gnu/libboost_regex.so;general;/usr/lib/x86_64-linux-gnu/libboost_system.so;general;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;general;/usr/lib/x86_64-linux-gnu/libboost_regex.so;general;/usr/lib/x86_64-linux-gnu/libz.so;
> 
> //Dependencies for the target
> FilterCatalog_LIB_DEPENDS:STATIC=general;Subgraphs;general;SubstructMatch;general;SmilesParse;general;GraphMol;general;Catalogs;general;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;
> 
> //Dependencies for the target
> Fingerprints_LIB_DEPENDS:STATIC=general;DataStructs;general;Subgraphs;general;SubstructMatch;general;SmilesParse;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> ForceFieldHelpers_LIB_DEPENDS:STATIC=general;SmilesParse;general;SubstructMatch;general;ForceField;
> 
> //Dependencies for the target
> ForceField_LIB_DEPENDS:STATIC=general;Optimizer;general;Trajectory;
> 
> //Dependencies for the target
> FragCatalog_LIB_DEPENDS:STATIC=general;Subgraphs;general;SubstructMatch;general;SmilesParse;general;Catalogs;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> GenericGroups_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> GraphMol_LIB_DEPENDS:STATIC=general;RDGeometryLib;general;RDGeneral;general;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;
> 
> //Dependencies for the target
> InfoTheory_LIB_DEPENDS:STATIC=general;DataStructs;general;RDGeneral;
> 
> //Command to build the project
> MAKECOMMAND:STRING=/usr/bin/cmake --build . --config "${CTEST_CONFIGURATION_TYPE}"
> 
> //Path to the memory checking command, used for memory error detection.
> MEMORYCHECK_COMMAND:FILEPATH=MEMORYCHECK_COMMAND-NOTFOUND
> 
> //File that contains suppressions for the memory checker
> MEMORYCHECK_SUPPRESSIONS_FILE:FILEPATH=
> 
> //Dependencies for the target
> MMPA_LIB_DEPENDS:STATIC=general;SubstructMatch;general;Depictor;general;FileParsers;general;ChemTransforms;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> MolAlign_LIB_DEPENDS:STATIC=general;MolTransforms;general;SmilesParse;general;SubstructMatch;general;Alignment;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> MolCatalog_LIB_DEPENDS:STATIC=general;GraphMol;general;Catalogs;
> 
> //Dependencies for the target
> MolChemicalFeatures_LIB_DEPENDS:STATIC=general;SubstructMatch;general;SmilesParse;general;GraphMol;
> 
> //Dependencies for the target
> MolDraw2D_LIB_DEPENDS:STATIC=general;ChemReactions;general;Depictor;general;MolTransforms;general;SubstructMatch;general;Subgraphs;general;GraphMol;general;EigenSolvers;general;/usr/lib/x86_64-linux-gnu/libfreetype.so;
> 
> //Dependencies for the target
> MolEnumerator_LIB_DEPENDS:STATIC=general;FileParsers;general;ChemReactions;general;ChemTransforms;general;SubstructMatch;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> MolHash_LIB_DEPENDS:STATIC=general;Depictor;general;Descriptors;general;GraphMol;
> 
> //Dependencies for the target
> MolInterchange_LIB_DEPENDS:STATIC=general;GraphMol;
> 
> //Dependencies for the target
> MolStandardize_LIB_DEPENDS:STATIC=general;ChemReactions;general;ChemTransforms;general;SmilesParse;general;SubstructMatch;general;Descriptors;general;GraphMol;
> 
> //Dependencies for the target
> MolTransforms_LIB_DEPENDS:STATIC=general;GraphMol;general;EigenSolvers;general;RDGeneral;
> 
> //Dependencies for the target
> O3AAlign_LIB_DEPENDS:STATIC=general;MolAlign;general;MolTransforms;general;SubstructMatch;general;Alignment;general;GraphMol;general;RDGeneral;general;ForceFieldHelpers;
> 
> //Dependencies for the target
> Optimizer_LIB_DEPENDS:STATIC=general;RDGeometryLib;general;Trajectory;general;RDGeneral;
> 
> //Arguments to supply to pkg-config
> PKG_CONFIG_ARGN:STRING=
> 
> //pkg-config executable
> PKG_CONFIG_EXECUTABLE:FILEPATH=/usr/bin/pkg-config
> 
> //Add module Clustering
> PYTHON_ENABLE_MODULE_Clustering:BOOL=ON
> 
> //Add module DistGeom
> PYTHON_ENABLE_MODULE_DistGeom:BOOL=ON
> 
> //Add module cDataStructs
> PYTHON_ENABLE_MODULE_cDataStructs:BOOL=ON
> 
> //Add module cQuantize
> PYTHON_ENABLE_MODULE_cQuantize:BOOL=ON
> 
> //Add module rdAbbreviations
> PYTHON_ENABLE_MODULE_rdAbbreviations:BOOL=ON
> 
> //Add module rdAlignment
> PYTHON_ENABLE_MODULE_rdAlignment:BOOL=ON
> 
> //Add module rdBase
> PYTHON_ENABLE_MODULE_rdBase:BOOL=ON
> 
> //Add module rdCIPLabeler
> PYTHON_ENABLE_MODULE_rdCIPLabeler:BOOL=ON
> 
> //Add module rdChemReactions
> PYTHON_ENABLE_MODULE_rdChemReactions:BOOL=ON
> 
> //Add module rdChemicalFeatures
> PYTHON_ENABLE_MODULE_rdChemicalFeatures:BOOL=ON
> 
> //Add module rdCoordGen
> PYTHON_ENABLE_MODULE_rdCoordGen:BOOL=ON
> 
> //Add module rdDepictor
> PYTHON_ENABLE_MODULE_rdDepictor:BOOL=ON
> 
> //Add module rdDeprotect
> PYTHON_ENABLE_MODULE_rdDeprotect:BOOL=ON
> 
> //Add module rdDistGeom
> PYTHON_ENABLE_MODULE_rdDistGeom:BOOL=ON
> 
> //Add module rdFMCS
> PYTHON_ENABLE_MODULE_rdFMCS:BOOL=ON
> 
> //Add module rdFingerprintGenerator
> PYTHON_ENABLE_MODULE_rdFingerprintGenerator:BOOL=ON
> 
> //Add module rdForceField
> PYTHON_ENABLE_MODULE_rdForceField:BOOL=ON
> 
> //Add module rdForceFieldHelpers
> PYTHON_ENABLE_MODULE_rdForceFieldHelpers:BOOL=ON
> 
> //Add module rdGeometry
> PYTHON_ENABLE_MODULE_rdGeometry:BOOL=ON
> 
> //Add module rdInfoTheory
> PYTHON_ENABLE_MODULE_rdInfoTheory:BOOL=ON
> 
> //Add module rdMHFPFingerprint
> PYTHON_ENABLE_MODULE_rdMHFPFingerprint:BOOL=ON
> 
> //Add module rdMMPA
> PYTHON_ENABLE_MODULE_rdMMPA:BOOL=ON
> 
> //Add module rdMetricMatrixCalc
> PYTHON_ENABLE_MODULE_rdMetricMatrixCalc:BOOL=ON
> 
> //Add module rdMolAlign
> PYTHON_ENABLE_MODULE_rdMolAlign:BOOL=ON
> 
> //Add module rdMolCatalog
> PYTHON_ENABLE_MODULE_rdMolCatalog:BOOL=ON
> 
> //Add module rdMolChemicalFeatures
> PYTHON_ENABLE_MODULE_rdMolChemicalFeatures:BOOL=ON
> 
> //Add module rdMolDescriptors
> PYTHON_ENABLE_MODULE_rdMolDescriptors:BOOL=ON
> 
> //Add module rdMolDraw2D
> PYTHON_ENABLE_MODULE_rdMolDraw2D:BOOL=ON
> 
> //Add module rdMolEnumerator
> PYTHON_ENABLE_MODULE_rdMolEnumerator:BOOL=ON
> 
> //Add module rdMolHash
> PYTHON_ENABLE_MODULE_rdMolHash:BOOL=ON
> 
> //Add module rdMolInterchange
> PYTHON_ENABLE_MODULE_rdMolInterchange:BOOL=ON
> 
> //Add module rdMolStandardize
> PYTHON_ENABLE_MODULE_rdMolStandardize:BOOL=ON
> 
> //Add module rdMolTransforms
> PYTHON_ENABLE_MODULE_rdMolTransforms:BOOL=ON
> 
> //Add module rdPartialCharges
> PYTHON_ENABLE_MODULE_rdPartialCharges:BOOL=ON
> 
> //Add module rdRGroupDecomposition
> PYTHON_ENABLE_MODULE_rdRGroupDecomposition:BOOL=ON
> 
> //Add module rdReducedGraphs
> PYTHON_ENABLE_MODULE_rdReducedGraphs:BOOL=ON
> 
> //Add module rdSLNParse
> PYTHON_ENABLE_MODULE_rdSLNParse:BOOL=ON
> 
> //Add module rdScaffoldNetwork
> PYTHON_ENABLE_MODULE_rdScaffoldNetwork:BOOL=ON
> 
> //Add module rdShapeHelpers
> PYTHON_ENABLE_MODULE_rdShapeHelpers:BOOL=ON
> 
> //Add module rdSimDivPickers
> PYTHON_ENABLE_MODULE_rdSimDivPickers:BOOL=ON
> 
> //Add module rdSubstructLibrary
> PYTHON_ENABLE_MODULE_rdSubstructLibrary:BOOL=ON
> 
> //Add module rdTautomerQuery
> PYTHON_ENABLE_MODULE_rdTautomerQuery:BOOL=ON
> 
> //Add module rdchem
> PYTHON_ENABLE_MODULE_rdchem:BOOL=ON
> 
> //Add module rdfiltercatalog
> PYTHON_ENABLE_MODULE_rdfiltercatalog:BOOL=ON
> 
> //Add module rdfragcatalog
> PYTHON_ENABLE_MODULE_rdfragcatalog:BOOL=ON
> 
> //Add module rdmolfiles
> PYTHON_ENABLE_MODULE_rdmolfiles:BOOL=ON
> 
> //Add module rdmolops
> PYTHON_ENABLE_MODULE_rdmolops:BOOL=ON
> 
> //Add module rdqueries
> PYTHON_ENABLE_MODULE_rdqueries:BOOL=ON
> 
> //Add module rdtrajectory
> PYTHON_ENABLE_MODULE_rdtrajectory:BOOL=ON
> 
> //Path to a program.
> PYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3.11
> 
> //Path to a file.
> PYTHON_INCLUDE_DIR:PATH=/usr/include/python3.11
> 
> //Path to a library.
> PYTHON_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libpython3.11.so
> 
> //Path to a library.
> PYTHON_LIBRARY_DEBUG:FILEPATH=PYTHON_LIBRARY_DEBUG-NOTFOUND
> 
> //Add module Clustering shared
> PYTHON_MODULE_Clustering_BUILD_SHARED:BOOL=ON
> 
> //Add module DistGeom shared
> PYTHON_MODULE_DistGeom_BUILD_SHARED:BOOL=ON
> 
> //Add module cDataStructs shared
> PYTHON_MODULE_cDataStructs_BUILD_SHARED:BOOL=ON
> 
> //Add module cQuantize shared
> PYTHON_MODULE_cQuantize_BUILD_SHARED:BOOL=ON
> 
> //Add module rdAbbreviations shared
> PYTHON_MODULE_rdAbbreviations_BUILD_SHARED:BOOL=ON
> 
> //Add module rdAlignment shared
> PYTHON_MODULE_rdAlignment_BUILD_SHARED:BOOL=ON
> 
> //Add module rdBase shared
> PYTHON_MODULE_rdBase_BUILD_SHARED:BOOL=ON
> 
> //Add module rdCIPLabeler shared
> PYTHON_MODULE_rdCIPLabeler_BUILD_SHARED:BOOL=ON
> 
> //Add module rdChemReactions shared
> PYTHON_MODULE_rdChemReactions_BUILD_SHARED:BOOL=ON
> 
> //Add module rdChemicalFeatures shared
> PYTHON_MODULE_rdChemicalFeatures_BUILD_SHARED:BOOL=ON
> 
> //Add module rdCoordGen shared
> PYTHON_MODULE_rdCoordGen_BUILD_SHARED:BOOL=ON
> 
> //Add module rdDepictor shared
> PYTHON_MODULE_rdDepictor_BUILD_SHARED:BOOL=ON
> 
> //Add module rdDeprotect shared
> PYTHON_MODULE_rdDeprotect_BUILD_SHARED:BOOL=ON
> 
> //Add module rdDistGeom shared
> PYTHON_MODULE_rdDistGeom_BUILD_SHARED:BOOL=ON
> 
> //Add module rdFMCS shared
> PYTHON_MODULE_rdFMCS_BUILD_SHARED:BOOL=ON
> 
> //Add module rdFingerprintGenerator shared
> PYTHON_MODULE_rdFingerprintGenerator_BUILD_SHARED:BOOL=ON
> 
> //Add module rdForceFieldHelpers shared
> PYTHON_MODULE_rdForceFieldHelpers_BUILD_SHARED:BOOL=ON
> 
> //Add module rdForceField shared
> PYTHON_MODULE_rdForceField_BUILD_SHARED:BOOL=ON
> 
> //Add module rdGeometry shared
> PYTHON_MODULE_rdGeometry_BUILD_SHARED:BOOL=ON
> 
> //Add module rdInfoTheory shared
> PYTHON_MODULE_rdInfoTheory_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMHFPFingerprint shared
> PYTHON_MODULE_rdMHFPFingerprint_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMMPA shared
> PYTHON_MODULE_rdMMPA_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMetricMatrixCalc shared
> PYTHON_MODULE_rdMetricMatrixCalc_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolAlign shared
> PYTHON_MODULE_rdMolAlign_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolCatalog shared
> PYTHON_MODULE_rdMolCatalog_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolChemicalFeatures shared
> PYTHON_MODULE_rdMolChemicalFeatures_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolDescriptors shared
> PYTHON_MODULE_rdMolDescriptors_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolDraw2D shared
> PYTHON_MODULE_rdMolDraw2D_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolEnumerator shared
> PYTHON_MODULE_rdMolEnumerator_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolHash shared
> PYTHON_MODULE_rdMolHash_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolInterchange shared
> PYTHON_MODULE_rdMolInterchange_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolStandardize shared
> PYTHON_MODULE_rdMolStandardize_BUILD_SHARED:BOOL=ON
> 
> //Add module rdMolTransforms shared
> PYTHON_MODULE_rdMolTransforms_BUILD_SHARED:BOOL=ON
> 
> //Add module rdPartialCharges shared
> PYTHON_MODULE_rdPartialCharges_BUILD_SHARED:BOOL=ON
> 
> //Add module rdRGroupDecomposition shared
> PYTHON_MODULE_rdRGroupDecomposition_BUILD_SHARED:BOOL=ON
> 
> //Add module rdReducedGraphs shared
> PYTHON_MODULE_rdReducedGraphs_BUILD_SHARED:BOOL=ON
> 
> //Add module rdSLNParse shared
> PYTHON_MODULE_rdSLNParse_BUILD_SHARED:BOOL=ON
> 
> //Add module rdScaffoldNetwork shared
> PYTHON_MODULE_rdScaffoldNetwork_BUILD_SHARED:BOOL=ON
> 
> //Add module rdShapeHelpers shared
> PYTHON_MODULE_rdShapeHelpers_BUILD_SHARED:BOOL=ON
> 
> //Add module rdSimDivPickers shared
> PYTHON_MODULE_rdSimDivPickers_BUILD_SHARED:BOOL=ON
> 
> //Add module rdSubstructLibrary shared
> PYTHON_MODULE_rdSubstructLibrary_BUILD_SHARED:BOOL=ON
> 
> //Add module rdTautomerQuery shared
> PYTHON_MODULE_rdTautomerQuery_BUILD_SHARED:BOOL=ON
> 
> //Add module rdchem shared
> PYTHON_MODULE_rdchem_BUILD_SHARED:BOOL=ON
> 
> //Add module rdfiltercatalog shared
> PYTHON_MODULE_rdfiltercatalog_BUILD_SHARED:BOOL=ON
> 
> //Add module rdfragcatalog shared
> PYTHON_MODULE_rdfragcatalog_BUILD_SHARED:BOOL=ON
> 
> //Add module rdmolfiles shared
> PYTHON_MODULE_rdmolfiles_BUILD_SHARED:BOOL=ON
> 
> //Add module rdmolops shared
> PYTHON_MODULE_rdmolops_BUILD_SHARED:BOOL=ON
> 
> //Add module rdqueries shared
> PYTHON_MODULE_rdqueries_BUILD_SHARED:BOOL=ON
> 
> //Add module rdtrajectory shared
> PYTHON_MODULE_rdtrajectory_BUILD_SHARED:BOOL=ON
> 
> //Directory where the arrayobject.h header file can be found. This
> // file is part of the numarray package
> PYTHON_NUMPY_INCLUDE_PATH:PATH=/usr/lib/python3/dist-packages/numpy/core/include
> 
> //Dependencies for the target
> PartialCharges_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> RDBoost_LIB_DEPENDS:STATIC=general;RDGeneral;
> 
> //Dependencies for the target
> RDGeneral_LIB_DEPENDS:STATIC=general;dl;
> 
> //Dependencies for the target
> RDGeometryLib_LIB_DEPENDS:STATIC=general;DataStructs;general;RDGeneral;
> 
> //Name of the boost python3 library. If installed as libboost_python-xxx.so,
> // use python-xxx.
> RDK_BOOST_PYTHON3_NAME:STRING=python3
> 
> //install support for the avalon toolkit. Use the variable AVALONTOOLS_DIR
> // to set the location of the source.
> RDK_BUILD_AVALON_SUPPORT:BOOL=OFF
> 
> //build support for Cairo drawing
> RDK_BUILD_CAIRO_SUPPORT:BOOL=ON
> 
> //build the CFFI wrapper (for use in other programming languges)
> RDK_BUILD_CFFI_LIB:BOOL=OFF
> 
> //build in support for compressed MolSuppliers
> RDK_BUILD_COMPRESSED_SUPPLIERS:BOOL=OFF
> 
> //build the Contrib directory
> RDK_BUILD_CONTRIB:BOOL=OFF
> 
> //build the rdkit coordgen wrapper
> RDK_BUILD_COORDGEN_SUPPORT:BOOL=ON
> 
> //build the c++ tests (disabing can speed up builds
> RDK_BUILD_CPP_TESTS:BOOL=ON
> 
> //Build the 3D descriptors calculators, requires Eigen3 to be installed
> RDK_BUILD_DESCRIPTORS3D:BOOL=ON
> 
> //build the rdkit freesasa wrapper
> RDK_BUILD_FREESASA_SUPPORT:BOOL=OFF
> 
> //build support for FreeType font handling
> RDK_BUILD_FREETYPE_SUPPORT:BOOL=ON
> 
> //build the fuzz targets
> RDK_BUILD_FUZZ_TARGETS:BOOL=OFF
> 
> //build the rdkit inchi wrapper
> RDK_BUILD_INCHI_SUPPORT:BOOL=OFF
> 
> //build the rdkit MAE parser wrapper
> RDK_BUILD_MAEPARSER_SUPPORT:BOOL=ON
> 
> //build the minimal RDKit wrapper (for the JS bindings)
> RDK_BUILD_MINIMAL_LIB:BOOL=OFF
> 
> //build in support for CommonChem molecule interchange
> RDK_BUILD_MOLINTERCHANGE_SUPPORT:BOOL=ON
> 
> //build the PostgreSQL cartridge
> RDK_BUILD_PGSQL:BOOL=OFF
> 
> //build the standard python wrappers
> RDK_BUILD_PYTHON_WRAPPERS:BOOL=ON
> 
> //build the QT drawing demo
> RDK_BUILD_QT_DEMO:BOOL=OFF
> 
> //build support for QT drawing
> RDK_BUILD_QT_SUPPORT:BOOL=OFF
> 
> //build shared libraries using rpath
> RDK_BUILD_RPATH_SUPPORT:BOOL=OFF
> 
> //include support for the SLN format
> RDK_BUILD_SLN_SUPPORT:BOOL=ON
> 
> //build in support for the StructChecker alpha (not recommended,
> // use the MolVS integration instead)
> RDK_BUILD_STRUCTCHECKER_SUPPORT:BOOL=OFF
> 
> //build the experimental SWIG C# wrappers (does nothing if RDK_BUILD_SWIG_WRAPPERS
> // is not set)
> RDK_BUILD_SWIG_CSHARP_WRAPPER:BOOL=OFF
> 
> //build the SWIG JAVA wrappers (does nothing if RDK_BUILD_SWIG_WRAPPERS
> // is not set)
> RDK_BUILD_SWIG_JAVA_WRAPPER:BOOL=ON
> 
> //build the SWIG wrappers
> RDK_BUILD_SWIG_WRAPPERS:BOOL=OFF
> 
> //Build the gzip'd stream test
> RDK_BUILD_TEST_GZIP:BOOL=OFF
> 
> //enable thread-safe substructure searching
> RDK_BUILD_THREADSAFE_SSS:BOOL=ON
> 
> //build in support for the RDKit's implementation of xyz2mol (in
> // the DetermineBonds library)
> RDK_BUILD_XYZ2MOL_SUPPORT:BOOL=OFF
> 
> //build support for the YAeHMOP wrapper
> RDK_BUILD_YAEHMOP_SUPPORT:BOOL=OFF
> 
> //the external libraries
> RDK_COORDGEN_LIBS:STRING=MolAlign;/usr/lib/x86_64-linux-gnu/libcoordgen.so;/usr/lib/x86_64-linux-gnu/libmaeparser.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;/usr/lib/x86_64-linux-gnu/libboost_regex.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;/usr/lib/x86_64-linux-gnu/libboost_regex.so
> 
> //download and install comic-neue to maximize the "utility" of
> // the comic mode in MolDraw2D
> RDK_INSTALL_COMIC_FONTS:BOOL=OFF
> 
> //install libraries and headers
> RDK_INSTALL_DEV_COMPONENT:BOOL=ON
> 
> //install the rdkit DLLs when using MSVC
> RDK_INSTALL_DLLS_MSVC:BOOL=OFF
> 
> //install the rdkit in the source tree (former behavior)
> RDK_INSTALL_INTREE:BOOL=OFF
> 
> //install the rdkit Python tests with the wrappers
> RDK_INSTALL_PYTHON_TESTS:BOOL=OFF
> 
> //install the rdkit static libraries
> RDK_INSTALL_STATIC_LIBS:BOOL=OFF
> 
> //the external libraries
> RDK_MAEPARSER_LIBS:STRING=/usr/lib/x86_64-linux-gnu/libmaeparser.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;/usr/lib/x86_64-linux-gnu/libboost_regex.so
> 
> //build the minimal RDKit JS wrapper such that it supports legacy
> // browsers
> RDK_MINIMAL_LIB_SUPPORT_LEGACY_BROWSERS:BOOL=OFF
> 
> //Use SSE4.2 popcount instruction while compiling.
> RDK_OPTIMIZE_POPCNT:BOOL=OFF
> 
> //statically link rdkit libraries into the PostgreSQL cartridge
> RDK_PGSQL_STATIC:BOOL=ON
> 
> //statically link rdkit libraries into the SWIG wrappers
> RDK_SWIG_STATIC:BOOL=ON
> 
> //Use G(L)COV to compute test coverage
> RDK_TEST_COVERAGE:BOOL=OFF
> 
> //run MMFF compliance tests (requires tar/gzip)
> RDK_TEST_MMFF_COMPLIANCE:BOOL=ON
> 
> //run some tests of multithreading
> RDK_TEST_MULTITHREADED:BOOL=ON
> 
> //use boost::iostreams
> RDK_USE_BOOST_IOSTREAMS:BOOL=ON
> 
> //use boost::regex instead of std::regex (needed for systems with
> // g++-4.8)
> RDK_USE_BOOST_REGEX:BOOL=OFF
> 
> //Use the boost serialization library if available
> RDK_USE_BOOST_SERIALIZATION:BOOL=ON
> 
> //use boost::stacktrace to do more verbose invariant output (linux
> // only)
> RDK_USE_BOOST_STACKTRACE:BOOL=ON
> 
> //use flex/bison, if available, to build the SMILES/SMARTS/SLN
> // parsers
> RDK_USE_FLEXBISON:BOOL=OFF
> 
> //Use Qt6 instead of Qt5
> RDK_USE_QT6:BOOL=OFF
> 
> //Use the most strict rotatable bond definition
> RDK_USE_STRICT_ROTOR_DEFINITION:BOOL=ON
> 
> //Build support for Florian Flachsenberg's URF library
> RDK_USE_URF:BOOL=OFF
> 
> //Value Computed by CMake
> RDKit_BINARY_DIR:STATIC=/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
> 
> //Value Computed by CMake
> RDKit_IS_TOP_LEVEL:STATIC=ON
> 
> //Value Computed by CMake
> RDKit_SOURCE_DIR:STATIC=/<<PKGBUILDDIR>>
> 
> //Dependencies for the target
> RDStreams_LIB_DEPENDS:STATIC=general;Boost::iostreams;
> 
> //Dependencies for the target
> RGroupDecomposition_LIB_DEPENDS:STATIC=general;FMCS;general;ChemTransforms;general;SubstructMatch;general;SmilesParse;general;Fingerprints;general;GraphMol;general;RDGeneral;general;ga;
> 
> //Dependencies for the target
> ReducedGraphs_LIB_DEPENDS:STATIC=general;SubstructMatch;general;SmilesParse;general;GraphMol;general;RDGeneral;
> 
> //Name of the computer/site where compile is being run
> SITE:STRING=ip-10-84-234-47
> 
> //Dependencies for the target
> SLNParse_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> ScaffoldNetwork_LIB_DEPENDS:STATIC=general;MolStandardize;general;ChemReactions;general;ChemTransforms;general;SmilesParse;general;SubstructMatch;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> ShapeHelpers_LIB_DEPENDS:STATIC=general;MolTransforms;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> SimDivPickers_LIB_DEPENDS:STATIC=general;hc;general;RDGeneral;
> 
> //Dependencies for the target
> SmilesParse_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> Subgraphs_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> SubstructLibrary_LIB_DEPENDS:STATIC=general;TautomerQuery;general;MolStandardize;general;Fingerprints;general;SubstructMatch;general;SmilesParse;general;GraphMol;general;Catalogs;general;DataStructs;general;RDGeneral;general;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;
> 
> //Dependencies for the target
> SubstructMatch_LIB_DEPENDS:STATIC=general;GenericGroups;general;GraphMol;general;RDGeneral;
> 
> //Dependencies for the target
> TautomerQuery_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;general;MolStandardize;general;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;
> 
> //Dependencies for the target
> Trajectory_LIB_DEPENDS:STATIC=general;GraphMol;general;RDGeneral;
> 
> //Path to a file.
> ZLIB_INCLUDE_DIR:PATH=/usr/include
> 
> //Path to a library.
> ZLIB_LIBRARY_DEBUG:FILEPATH=ZLIB_LIBRARY_DEBUG-NOTFOUND
> 
> //Path to a library.
> ZLIB_LIBRARY_RELEASE:FILEPATH=/usr/lib/x86_64-linux-gnu/libz.so
> 
> //Dependencies for the target
> cDataStructs_LIB_DEPENDS:STATIC=general;DataStructs;general;RDBoost;
> 
> //Dependencies for the target
> cQuantize_LIB_DEPENDS:STATIC=general;InfoTheory;general;RDGeneral;general;RDBoost;
> 
> //include path for coordgen
> coordgen_INCLUDE_DIRS:PATH=/usr/include
> 
> //libraries for coordgen
> coordgen_LIBRARIES:FILEPATH=/usr/lib/x86_64-linux-gnu/libcoordgen.so
> 
> //include path for maeparser
> maeparser_INCLUDE_DIRS:PATH=/usr/include
> 
> //libraries for maeparser
> maeparser_LIBRARIES:FILEPATH=/usr/lib/x86_64-linux-gnu/libmaeparser.so
> 
> //Path to a library.
> pkgcfg_lib_PC_CAIRO_cairo:FILEPATH=/usr/lib/x86_64-linux-gnu/libcairo.so
> 
> //Dependencies for the target
> rdAbbreviations_LIB_DEPENDS:STATIC=general;Abbreviations;general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdAlignment_LIB_DEPENDS:STATIC=general;Alignment;general;RDBoost;
> 
> //Dependencies for the target
> rdBase_LIB_DEPENDS:STATIC=general;RDGeneral;general;RDBoost;general;RDBoost;
> 
> //Dependencies for the target
> rdCIPLabeler_LIB_DEPENDS:STATIC=general;GraphMol;general;CIPLabeler;general;RDBoost;general;RDBoost;
> 
> //Dependencies for the target
> rdChemReactions_LIB_DEPENDS:STATIC=general;ChemReactions;general;RDBoost;
> 
> //Dependencies for the target
> rdChemicalFeatures_LIB_DEPENDS:STATIC=general;ChemicalFeatures;general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdCoordGen_LIB_DEPENDS:STATIC=general;MolAlign;general;/usr/lib/x86_64-linux-gnu/libcoordgen.so;general;/usr/lib/x86_64-linux-gnu/libmaeparser.so;general;/usr/lib/x86_64-linux-gnu/libboost_system.so;general;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;general;/usr/lib/x86_64-linux-gnu/libboost_regex.so;general;/usr/lib/x86_64-linux-gnu/libboost_system.so;general;/usr/lib/x86_64-linux-gnu/libboost_iostreams.so;general;/usr/lib/x86_64-linux-gnu/libboost_regex.so;general;MolAlign;general;SubstructMatch;general;GraphMol;general;DataStructs;general;RDGeometryLib;general;RDGeneral;general;RDBoost;general;RDBoost;
> 
> //Dependencies for the target
> rdDepictor_LIB_DEPENDS:STATIC=general;Depictor;general;RDBoost;
> 
> //Dependencies for the target
> rdDeprotect_LIB_DEPENDS:STATIC=general;Deprotect;general;RDBoost;
> 
> //Dependencies for the target
> rdDistGeom_LIB_DEPENDS:STATIC=general;DistGeomHelpers;general;FileParsers;general;MolTransforms;general;SmilesParse;general;SubstructMatch;general;MolAlign;general;EigenSolvers;general;RDBoost;
> 
> //Dependencies for the target
> rdFMCS_LIB_DEPENDS:STATIC=general;FMCS;general;RDBoost;
> 
> //Dependencies for the target
> rdFingerprintGenerator_LIB_DEPENDS:STATIC=general;Fingerprints;general;RDBoost;
> 
> //Dependencies for the target
> rdForceFieldHelpers_LIB_DEPENDS:STATIC=general;ForceFieldHelpers;general;RDBoost;
> 
> //Dependencies for the target
> rdForceField_LIB_DEPENDS:STATIC=general;ForceFieldHelpers;general;RDBoost;
> 
> //Dependencies for the target
> rdGeometry_LIB_DEPENDS:STATIC=general;RDGeometryLib;general;RDBoost;
> 
> //Dependencies for the target
> rdInfoTheory_LIB_DEPENDS:STATIC=general;InfoTheory;general;RDBoost;
> 
> //Dependencies for the target
> rdMHFPFingerprint_LIB_DEPENDS:STATIC=general;Fingerprints;general;RDBoost;
> 
> //Dependencies for the target
> rdMMPA_LIB_DEPENDS:STATIC=general;MMPA;general;RDBoost;
> 
> //Dependencies for the target
> rdMetricMatrixCalc_LIB_DEPENDS:STATIC=general;DataStructs;general;RDBoost;
> 
> //Dependencies for the target
> rdMolAlign_LIB_DEPENDS:STATIC=general;MolAlign;general;O3AAlign;general;DataStructs;general;Descriptors;general;SmilesParse;general;RDBoost;
> 
> //Dependencies for the target
> rdMolCatalog_LIB_DEPENDS:STATIC=general;MolCatalog;general;RDBoost;
> 
> //Dependencies for the target
> rdMolChemicalFeatures_LIB_DEPENDS:STATIC=general;MolChemicalFeatures;general;RDBoost;
> 
> //Dependencies for the target
> rdMolDescriptors_LIB_DEPENDS:STATIC=general;Descriptors;general;Fingerprints;general;RDBoost;
> 
> //Dependencies for the target
> rdMolDraw2D_LIB_DEPENDS:STATIC=general;MolDraw2D;general;RDBoost;
> 
> //Dependencies for the target
> rdMolEnumerator_LIB_DEPENDS:STATIC=general;MolEnumerator;general;RDBoost;
> 
> //Dependencies for the target
> rdMolHash_LIB_DEPENDS:STATIC=general;MolHash;general;RDBoost;
> 
> //Dependencies for the target
> rdMolInterchange_LIB_DEPENDS:STATIC=general;MolInterchange;general;RDBoost;
> 
> //Dependencies for the target
> rdMolStandardize_LIB_DEPENDS:STATIC=general;MolStandardize;general;RDBoost;
> 
> //Dependencies for the target
> rdMolTransforms_LIB_DEPENDS:STATIC=general;MolTransforms;general;RDBoost;
> 
> //Dependencies for the target
> rdPartialCharges_LIB_DEPENDS:STATIC=general;PartialCharges;general;RDBoost;
> 
> //Dependencies for the target
> rdRGroupDecomposition_LIB_DEPENDS:STATIC=general;RGroupDecomposition;general;RDBoost;
> 
> //Dependencies for the target
> rdReducedGraphs_LIB_DEPENDS:STATIC=general;ReducedGraphs;general;RDBoost;
> 
> //Dependencies for the target
> rdSLNParse_LIB_DEPENDS:STATIC=general;SLNParse;general;RDBoost;
> 
> //Dependencies for the target
> rdScaffoldNetwork_LIB_DEPENDS:STATIC=general;ScaffoldNetwork;general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdShapeHelpers_LIB_DEPENDS:STATIC=general;ShapeHelpers;general;RDBoost;
> 
> //Dependencies for the target
> rdSimDivPickers_LIB_DEPENDS:STATIC=general;SimDivPickers;general;DataStructs;general;RDBoost;
> 
> //Dependencies for the target
> rdSubstructLibrary_LIB_DEPENDS:STATIC=general;SubstructLibrary;general;RDBoost;
> 
> //Dependencies for the target
> rdTautomerQuery_LIB_DEPENDS:STATIC=general;TautomerQuery;general;RDBoost;
> 
> //Dependencies for the target
> rdchem_LIB_DEPENDS:STATIC=general;SmilesParse;general;ChemTransforms;general;SubstructMatch;general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdfiltercatalog_LIB_DEPENDS:STATIC=general;FilterCatalog;general;RDBoost;
> 
> //Dependencies for the target
> rdfragcatalog_LIB_DEPENDS:STATIC=general;FragCatalog;general;FileParsers;general;RDBoost;
> 
> //Dependencies for the target
> rdmolfiles_LIB_DEPENDS:STATIC=general;SubstructMatch;general;SmilesParse;general;FileParsers;general;GraphMol;general;RDGeometryLib;general;RDGeneral;general;RDBoost;general;RDBoost;
> 
> //Dependencies for the target
> rdmolops_LIB_DEPENDS:STATIC=general;ChemReactions;general;Depictor;general;FileParsers;general;SubstructMatch;general;Fingerprints;general;ChemTransforms;general;Subgraphs;general;SmilesParse;general;MolTransforms;general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdqueries_LIB_DEPENDS:STATIC=general;GraphMol;general;RDBoost;
> 
> //Dependencies for the target
> rdtrajectory_LIB_DEPENDS:STATIC=general;Trajectory;general;RDGeometryLib;general;RDGeneral;general;RDBoost;general;GraphMol;general;RDBoost;
> 
> 
> ########################
> # INTERNAL cache entries
> ########################
> 
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> //Details about finding PkgConfig
> FIND_PACKAGE_MESSAGE_DETAILS_PkgConfig:INTERNAL=[/usr/bin/pkg-config][v1.8.1()]
> //Details about finding PythonInterp
> FIND_PACKAGE_MESSAGE_DETAILS_PythonInterp:INTERNAL=[/usr/bin/python3.11][v3.11.6()]
> //Details about finding PythonLibs
> FIND_PACKAGE_MESSAGE_DETAILS_PythonLibs:INTERNAL=[/usr/lib/x86_64-linux-gnu/libpython3.11.so][/usr/include/python3.11][v3.11.6()]
> //Details about finding Threads
> FIND_PACKAGE_MESSAGE_DETAILS_Threads:INTERNAL=[TRUE][v()]
> //Details about finding ZLIB
> FIND_PACKAGE_MESSAGE_DETAILS_ZLIB:INTERNAL=[/usr/lib/x86_64-linux-gnu/libz.so][/usr/include][c ][v1.2.13()]
> //Details about finding coordgen
> FIND_PACKAGE_MESSAGE_DETAILS_coordgen:INTERNAL=[/usr/include][/usr/lib/x86_64-linux-gnu/libcoordgen.so][v()]
> //Details about finding maeparser
> FIND_PACKAGE_MESSAGE_DETAILS_maeparser:INTERNAL=[/usr/include][/usr/lib/x86_64-linux-gnu/libmaeparser.so][v()]
> //ADVANCED property for variable: FREETYPE_INCLUDE_DIR_freetype2
> FREETYPE_INCLUDE_DIR_freetype2-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: FREETYPE_INCLUDE_DIR_ft2build
> FREETYPE_INCLUDE_DIR_ft2build-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: FREETYPE_LIBRARY_DEBUG
> FREETYPE_LIBRARY_DEBUG-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: FREETYPE_LIBRARY_RELEASE
> FREETYPE_LIBRARY_RELEASE-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: MAKECOMMAND
> MAKECOMMAND-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: MEMORYCHECK_COMMAND
> MEMORYCHECK_COMMAND-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: MEMORYCHECK_SUPPRESSIONS_FILE
> MEMORYCHECK_SUPPRESSIONS_FILE-ADVANCED:INTERNAL=1
> PC_CAIRO_CFLAGS:INTERNAL=-I/usr/include/cairo;-I/usr/include/libpng16;-I/usr/include/freetype2;-I/usr/include/pixman-1
> PC_CAIRO_CFLAGS_I:INTERNAL=
> PC_CAIRO_CFLAGS_OTHER:INTERNAL=
> PC_CAIRO_FOUND:INTERNAL=1
> PC_CAIRO_INCLUDEDIR:INTERNAL=/usr/include
> PC_CAIRO_INCLUDE_DIRS:INTERNAL=/usr/include/cairo;/usr/include/libpng16;/usr/include/freetype2;/usr/include/pixman-1
> PC_CAIRO_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lcairo
> PC_CAIRO_LDFLAGS_OTHER:INTERNAL=
> PC_CAIRO_LIBDIR:INTERNAL=/usr/lib/x86_64-linux-gnu
> PC_CAIRO_LIBRARIES:INTERNAL=cairo
> PC_CAIRO_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu
> PC_CAIRO_LIBS:INTERNAL=
> PC_CAIRO_LIBS_L:INTERNAL=
> PC_CAIRO_LIBS_OTHER:INTERNAL=
> PC_CAIRO_LIBS_PATHS:INTERNAL=
> PC_CAIRO_MODULE_NAME:INTERNAL=cairo
> PC_CAIRO_PREFIX:INTERNAL=/usr
> PC_CAIRO_STATIC_CFLAGS:INTERNAL=-I/usr/include/cairo;-I/usr/include/libpng16;-I/usr/include/freetype2;-I/usr/include/pixman-1
> PC_CAIRO_STATIC_CFLAGS_I:INTERNAL=
> PC_CAIRO_STATIC_CFLAGS_OTHER:INTERNAL=
> PC_CAIRO_STATIC_INCLUDE_DIRS:INTERNAL=/usr/include/cairo;/usr/include/libpng16;/usr/include/freetype2;/usr/include/pixman-1
> PC_CAIRO_STATIC_LDFLAGS:INTERNAL=-L/usr/lib/x86_64-linux-gnu;-lcairo;-lm;-ldl;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-lm;-lz;-lm;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-lfontconfig;-lbz2;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-lm;-lz;-lm;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-L/usr/lib/x86_64-linux-gnu;-lbrotlicommon;-L/usr/lib/x86_64-linux-gnu;-lexpat;-lm;-lfreetype;-lbz2;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-lpng16;-lm;-lz;-lm;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lz;-lbrotlidec;-L/usr/lib/x86_64-linux-gnu;-lbrotlicommon;-lX11;-lpthread;-L/usr/lib/x86_64-linux-gnu;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-lXext;-L/usr/lib/x86_64-linux-gnu;-lpthread;-L/usr/lib/x86_64-linux-gnu;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-lXrender;-lX11;-lpthread;-L/usr/lib/x86_64-linux-gnu;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-L/usr/lib/x86_64-linux-gnu;-lX11;-lpthread;-L/usr/lib/x86_64-linux-gnu;-L/usr/lib/x86_64-linux-gnu;-lXau;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-lxcb-render;-L/usr/lib/x86_64-linux-gnu;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-lxcb-shm;-L/usr/lib/x86_64-linux-gnu;-lxcb;-L/usr/lib/x86_64-linux-gnu;-lXau;-lXdmcp;-lpixman-1
> PC_CAIRO_STATIC_LDFLAGS_OTHER:INTERNAL=
> PC_CAIRO_STATIC_LIBDIR:INTERNAL=
> PC_CAIRO_STATIC_LIBRARIES:INTERNAL=cairo;m;dl;z;m;z;m;z;fontconfig;bz2;z;m;z;m;z;brotlicommon;expat;m;freetype;bz2;z;png16;m;z;m;z;brotlidec;brotlicommon;X11;pthread;xcb;Xau;Xext;pthread;xcb;Xau;Xrender;X11;pthread;xcb;Xau;X11;pthread;Xau;xcb;Xau;xcb-render;xcb;Xau;xcb-shm;xcb;Xau;Xdmcp;pixman-1
> PC_CAIRO_STATIC_LIBRARY_DIRS:INTERNAL=/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu;/usr/lib/x86_64-linux-gnu
> PC_CAIRO_STATIC_LIBS:INTERNAL=
> PC_CAIRO_STATIC_LIBS_L:INTERNAL=
> PC_CAIRO_STATIC_LIBS_OTHER:INTERNAL=
> PC_CAIRO_STATIC_LIBS_PATHS:INTERNAL=
> PC_CAIRO_VERSION:INTERNAL=1.18.0
> PC_CAIRO_cairo_INCLUDEDIR:INTERNAL=
> PC_CAIRO_cairo_LIBDIR:INTERNAL=
> PC_CAIRO_cairo_PREFIX:INTERNAL=
> PC_CAIRO_cairo_VERSION:INTERNAL=
> //ADVANCED property for variable: PKG_CONFIG_ARGN
> PKG_CONFIG_ARGN-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PKG_CONFIG_EXECUTABLE
> PKG_CONFIG_EXECUTABLE-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_Clustering
> PYTHON_ENABLE_MODULE_Clustering-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_DistGeom
> PYTHON_ENABLE_MODULE_DistGeom-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_cDataStructs
> PYTHON_ENABLE_MODULE_cDataStructs-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_cQuantize
> PYTHON_ENABLE_MODULE_cQuantize-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdAbbreviations
> PYTHON_ENABLE_MODULE_rdAbbreviations-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdAlignment
> PYTHON_ENABLE_MODULE_rdAlignment-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdBase
> PYTHON_ENABLE_MODULE_rdBase-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdCIPLabeler
> PYTHON_ENABLE_MODULE_rdCIPLabeler-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdChemReactions
> PYTHON_ENABLE_MODULE_rdChemReactions-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdChemicalFeatures
> PYTHON_ENABLE_MODULE_rdChemicalFeatures-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdCoordGen
> PYTHON_ENABLE_MODULE_rdCoordGen-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdDepictor
> PYTHON_ENABLE_MODULE_rdDepictor-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdDeprotect
> PYTHON_ENABLE_MODULE_rdDeprotect-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdDistGeom
> PYTHON_ENABLE_MODULE_rdDistGeom-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdFMCS
> PYTHON_ENABLE_MODULE_rdFMCS-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdFingerprintGenerator
> PYTHON_ENABLE_MODULE_rdFingerprintGenerator-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdForceField
> PYTHON_ENABLE_MODULE_rdForceField-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdForceFieldHelpers
> PYTHON_ENABLE_MODULE_rdForceFieldHelpers-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdGeometry
> PYTHON_ENABLE_MODULE_rdGeometry-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdInfoTheory
> PYTHON_ENABLE_MODULE_rdInfoTheory-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMHFPFingerprint
> PYTHON_ENABLE_MODULE_rdMHFPFingerprint-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMMPA
> PYTHON_ENABLE_MODULE_rdMMPA-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMetricMatrixCalc
> PYTHON_ENABLE_MODULE_rdMetricMatrixCalc-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolAlign
> PYTHON_ENABLE_MODULE_rdMolAlign-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolCatalog
> PYTHON_ENABLE_MODULE_rdMolCatalog-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolChemicalFeatures
> PYTHON_ENABLE_MODULE_rdMolChemicalFeatures-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolDescriptors
> PYTHON_ENABLE_MODULE_rdMolDescriptors-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolDraw2D
> PYTHON_ENABLE_MODULE_rdMolDraw2D-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolEnumerator
> PYTHON_ENABLE_MODULE_rdMolEnumerator-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolHash
> PYTHON_ENABLE_MODULE_rdMolHash-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolInterchange
> PYTHON_ENABLE_MODULE_rdMolInterchange-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolStandardize
> PYTHON_ENABLE_MODULE_rdMolStandardize-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdMolTransforms
> PYTHON_ENABLE_MODULE_rdMolTransforms-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdPartialCharges
> PYTHON_ENABLE_MODULE_rdPartialCharges-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdRGroupDecomposition
> PYTHON_ENABLE_MODULE_rdRGroupDecomposition-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdReducedGraphs
> PYTHON_ENABLE_MODULE_rdReducedGraphs-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdSLNParse
> PYTHON_ENABLE_MODULE_rdSLNParse-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdScaffoldNetwork
> PYTHON_ENABLE_MODULE_rdScaffoldNetwork-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdShapeHelpers
> PYTHON_ENABLE_MODULE_rdShapeHelpers-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdSimDivPickers
> PYTHON_ENABLE_MODULE_rdSimDivPickers-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdSubstructLibrary
> PYTHON_ENABLE_MODULE_rdSubstructLibrary-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdTautomerQuery
> PYTHON_ENABLE_MODULE_rdTautomerQuery-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdchem
> PYTHON_ENABLE_MODULE_rdchem-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdfiltercatalog
> PYTHON_ENABLE_MODULE_rdfiltercatalog-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdfragcatalog
> PYTHON_ENABLE_MODULE_rdfragcatalog-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdmolfiles
> PYTHON_ENABLE_MODULE_rdmolfiles-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdmolops
> PYTHON_ENABLE_MODULE_rdmolops-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdqueries
> PYTHON_ENABLE_MODULE_rdqueries-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_ENABLE_MODULE_rdtrajectory
> PYTHON_ENABLE_MODULE_rdtrajectory-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_EXECUTABLE
> PYTHON_EXECUTABLE-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_INCLUDE_DIR
> PYTHON_INCLUDE_DIR-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_LIBRARY
> PYTHON_LIBRARY-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_LIBRARY_DEBUG
> PYTHON_LIBRARY_DEBUG-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_Clustering_BUILD_SHARED
> PYTHON_MODULE_Clustering_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_DistGeom_BUILD_SHARED
> PYTHON_MODULE_DistGeom_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_cDataStructs_BUILD_SHARED
> PYTHON_MODULE_cDataStructs_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_cQuantize_BUILD_SHARED
> PYTHON_MODULE_cQuantize_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdAbbreviations_BUILD_SHARED
> PYTHON_MODULE_rdAbbreviations_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdAlignment_BUILD_SHARED
> PYTHON_MODULE_rdAlignment_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdBase_BUILD_SHARED
> PYTHON_MODULE_rdBase_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdCIPLabeler_BUILD_SHARED
> PYTHON_MODULE_rdCIPLabeler_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdChemReactions_BUILD_SHARED
> PYTHON_MODULE_rdChemReactions_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdChemicalFeatures_BUILD_SHARED
> PYTHON_MODULE_rdChemicalFeatures_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdCoordGen_BUILD_SHARED
> PYTHON_MODULE_rdCoordGen_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdDepictor_BUILD_SHARED
> PYTHON_MODULE_rdDepictor_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdDeprotect_BUILD_SHARED
> PYTHON_MODULE_rdDeprotect_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdDistGeom_BUILD_SHARED
> PYTHON_MODULE_rdDistGeom_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdFMCS_BUILD_SHARED
> PYTHON_MODULE_rdFMCS_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdFingerprintGenerator_BUILD_SHARED
> PYTHON_MODULE_rdFingerprintGenerator_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdForceFieldHelpers_BUILD_SHARED
> PYTHON_MODULE_rdForceFieldHelpers_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdForceField_BUILD_SHARED
> PYTHON_MODULE_rdForceField_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdGeometry_BUILD_SHARED
> PYTHON_MODULE_rdGeometry_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdInfoTheory_BUILD_SHARED
> PYTHON_MODULE_rdInfoTheory_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMHFPFingerprint_BUILD_SHARED
> PYTHON_MODULE_rdMHFPFingerprint_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMMPA_BUILD_SHARED
> PYTHON_MODULE_rdMMPA_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMetricMatrixCalc_BUILD_SHARED
> PYTHON_MODULE_rdMetricMatrixCalc_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolAlign_BUILD_SHARED
> PYTHON_MODULE_rdMolAlign_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolCatalog_BUILD_SHARED
> PYTHON_MODULE_rdMolCatalog_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolChemicalFeatures_BUILD_SHARED
> PYTHON_MODULE_rdMolChemicalFeatures_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolDescriptors_BUILD_SHARED
> PYTHON_MODULE_rdMolDescriptors_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolDraw2D_BUILD_SHARED
> PYTHON_MODULE_rdMolDraw2D_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolEnumerator_BUILD_SHARED
> PYTHON_MODULE_rdMolEnumerator_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolHash_BUILD_SHARED
> PYTHON_MODULE_rdMolHash_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolInterchange_BUILD_SHARED
> PYTHON_MODULE_rdMolInterchange_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolStandardize_BUILD_SHARED
> PYTHON_MODULE_rdMolStandardize_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdMolTransforms_BUILD_SHARED
> PYTHON_MODULE_rdMolTransforms_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdPartialCharges_BUILD_SHARED
> PYTHON_MODULE_rdPartialCharges_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdRGroupDecomposition_BUILD_SHARED
> PYTHON_MODULE_rdRGroupDecomposition_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdReducedGraphs_BUILD_SHARED
> PYTHON_MODULE_rdReducedGraphs_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdSLNParse_BUILD_SHARED
> PYTHON_MODULE_rdSLNParse_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdScaffoldNetwork_BUILD_SHARED
> PYTHON_MODULE_rdScaffoldNetwork_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdShapeHelpers_BUILD_SHARED
> PYTHON_MODULE_rdShapeHelpers_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdSimDivPickers_BUILD_SHARED
> PYTHON_MODULE_rdSimDivPickers_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdSubstructLibrary_BUILD_SHARED
> PYTHON_MODULE_rdSubstructLibrary_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdTautomerQuery_BUILD_SHARED
> PYTHON_MODULE_rdTautomerQuery_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdchem_BUILD_SHARED
> PYTHON_MODULE_rdchem_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdfiltercatalog_BUILD_SHARED
> PYTHON_MODULE_rdfiltercatalog_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdfragcatalog_BUILD_SHARED
> PYTHON_MODULE_rdfragcatalog_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdmolfiles_BUILD_SHARED
> PYTHON_MODULE_rdmolfiles_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdmolops_BUILD_SHARED
> PYTHON_MODULE_rdmolops_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdqueries_BUILD_SHARED
> PYTHON_MODULE_rdqueries_BUILD_SHARED-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: PYTHON_MODULE_rdtrajectory_BUILD_SHARED
> PYTHON_MODULE_rdtrajectory_BUILD_SHARED-ADVANCED:INTERNAL=1
> //Python numpy development package is available
> PYTHON_NUMPY_FOUND:INTERNAL=1
> //Global list of python tests
> RDKIT_PYTEST_CACHE:INTERNAL=pythonTestDirChem;pythonTestSping;pythonTestDirVLib;pythonTestDirSimDivFilters;pythonTestDirDbase;pythonTestDirDataStructs;pythonTestDirML;pythonTestDirRoot;pythonTestDbCLI;pyFeatures;pyRanker;pySimDivPickers;pyMatCalc;pyAbbreviations;pyMolEnumerator;pyScaffoldNetworkPickling;pyScaffoldNetwork;pyMolStandardize;pyCDXMLTest;pyTestPropertyLists;pyTestMultithreadedMolSupplier;pyTestThreads;pyTestSGroups;pyTestTrajectory;pyTestConformerWrap;pyGraphMolWrap;pySLNParse;pyMolInterchange;pyRGroupDecomposition;pySubstructLibrary;pyReducedGraphs;pyDeprotect;pyCIPLabelsValidation;pyCIPLabelsWrapTest;pyMMPA;pyMolHash;pyFMCS;pyMolDraw2D;pyMolCatalog;pyShapeHelpers;pyChemicalFeatures;pyMolAlign;pyDistGeomHelpers;pyForceFieldHelpers;pyMolTransforms;pyPartialCharges;pyTestMHFP;pyTestGenerator;pyMolDescriptors3D;pyMolDescriptors;pyFragCatalog;pyFilterCatalog;pyTautomerQuery;pyChemReactionSanitize;pyChemReactionEnumerations;pyChemReactions;pyDepictor;pyDistGeom;pyForceFieldConstraints;pyAlignment;testPyGeometry;pyFPB;pySparseIntVect;pyDiscreteValueVect;pyBV;pyCoordGen;
> //ADVANCED property for variable: SITE
> SITE-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: ZLIB_INCLUDE_DIR
> ZLIB_INCLUDE_DIR-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: ZLIB_LIBRARY_DEBUG
> ZLIB_LIBRARY_DEBUG-ADVANCED:INTERNAL=1
> //ADVANCED property for variable: ZLIB_LIBRARY_RELEASE
> ZLIB_LIBRARY_RELEASE-ADVANCED:INTERNAL=1
> //Components requested for this build tree.
> _Boost_COMPONENTS_SEARCHED:INTERNAL=iostreams;program_options;python-py311;python3;python311;regex;serialization;system
> //Last used Boost_INCLUDE_DIR value.
> _Boost_INCLUDE_DIR_LAST:INTERNAL=/usr/include
> //Last used Boost_LIBRARY_DIR_DEBUG value.
> _Boost_LIBRARY_DIR_DEBUG_LAST:INTERNAL=/usr/lib/x86_64-linux-gnu
> //Last used Boost_LIBRARY_DIR_RELEASE value.
> _Boost_LIBRARY_DIR_RELEASE_LAST:INTERNAL=/usr/lib/x86_64-linux-gnu
> //Last used Boost_NAMESPACE value.
> _Boost_NAMESPACE_LAST:INTERNAL=boost
> //Last used Boost_USE_MULTITHREADED value.
> _Boost_USE_MULTITHREADED_LAST:INTERNAL=TRUE
> //linker supports push/pop state
> _CMAKE_LINKER_PUSHPOP_STATE_SUPPORTED:INTERNAL=TRUE
> __pkg_config_arguments_PC_CAIRO:INTERNAL=cairo;QUIET
> __pkg_config_checked_PC_CAIRO:INTERNAL=1
> //ADVANCED property for variable: pkgcfg_lib_PC_CAIRO_cairo
> pkgcfg_lib_PC_CAIRO_cairo-ADVANCED:INTERNAL=1
> prefix_result:INTERNAL=/usr/lib/x86_64-linux-gnu
> 
> dh_auto_configure: error: cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DPYTHON_EXECUTABLE=/usr/bin/python3.11 ../ .. returned exit code 1
> make[1]: *** [debian/rules:88: override_dh_auto_configure] Error 2

The full build log is available from:
http://qa-logs.debian.net/2023/10/27/rdkit_202303.3-3_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20231027;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20231027&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.