[Debichem-devel] Bug#1078758: votca: FTBFS with HDF5 1.14 - fatal error: in "aobasis_test/Serializing": std::runtime_error: Could not create or open aobasis.hdf5:/

[Gilles Filippini]

Source: votca
Version: 2024.1-1
Severity: important

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Hi,

The votca package fails to build from source in a test rebuild against
hdf5 1.14 currently in experimental. The failure occurs during the
post-build tests.

Here is an exerpt from the log related to the first failing testcase:

164: Test command: /build/votca-absneN/votca-2024.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aobasis
164: Working Directory: /build/votca-absneN/votca-2024.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aobasis
164: Test timeout computed to be: 1500
164: Running 3 test cases...
164: unknown location(0): ESC[4;31;49mfatal error: in "aobasis_test/Serializing": std::runtime_error: Could not create or open aobasis.hdf5:/
164: ESC[0;39;49m
164: ./xtp/src/tests/test_aobasis.cc(97): ESC[1;36;49mlast checkpoint: "Serializing" test entryESC[0;39;49m
164: 
164: ESC[1;31;49m*** 1 failure is detected in the test module "aobasis_test"
164: ESC[0;39;49m
164/249 Test #164: unit_test_aobasis ..................................***Failed    0.02 sec
Running 3 test cases...
unknown location(0): ESC[4;31;49mfatal error: in "aobasis_test/Serializing": std::runtime_error: Could not create or open aobasis.hdf5:/
ESC[0;39;49m
./xtp/src/tests/test_aobasis.cc(97): ESC[1;36;49mlast checkpoint: "Serializing" test entryESC[0;39;49m

ESC[1;31;49m*** 1 failure is detected in the test module "aobasis_test"

List of failed testcases:
        164 - unit_test_aobasis (Failed)
        171 - unit_test_polarsegment (Failed)
        172 - unit_test_qmmolecule (Failed)
        180 - unit_test_ecpaobasis (Failed)
        185 - unit_test_hdf5 (Failed)
        201 - unit_test_segment (Failed)
        204 - unit_test_statetracker (Failed)
        221 - unit_test_hist (Failed)
        222 - unit_test_qmfragment (Failed)
        246 - unit_test_activedftengine (Failed)
        247 - unit_test_truncdftengine (Failed)

Full build log attached.

Best,
_g.

- -- System Information:
Debian Release: 12.0
Architecture: amd64 (x86_64)

Kernel: Linux 6.1.0-21-amd64 (SMP w/12 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

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