[Debichem-devel] Bug#1080517: jni-inchi: FTBFS with inchi 1.07.1

Sebastian Ramacher sramacher at debian.org
Thu Sep 5 10:55:35 BST 2024


Source: jni-inchi
Version: 0.8+dfsg-7
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
X-Debbugs-Cc: sramacher at debian.org

https://buildd.debian.org/status/fetch.php?pkg=jni-inchi&arch=amd64&ver=0.8%2Bdfsg-7%2Bb1&stamp=1725526366&raw=0

[ERROR] Tests run: 9, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.095 s <<< FAILURE! - in net.sf.jniinchi.TestExamples
[ERROR] testCheckInchi(net.sf.jniinchi.TestExamples)  Time elapsed: 0.006 s  <<< ERROR!
net.sf.jniinchi.JniInchiException: Unknown return status: 6
	at net.sf.jniinchi.TestExamples.testCheckInchi(TestExamples.java:162)

[INFO] Running net.sf.jniinchi.TestJniInchiInputInchi
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.069 s - in net.sf.jniinchi.TestJniInchiInputInchi
[INFO] Running net.sf.jniinchi.TestJniInchiOutputStructure
[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.075 s - in net.sf.jniinchi.TestJniInchiOutputStructure
[INFO] Running net.sf.jniinchi.TestJniInchiOutput
[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.072 s - in net.sf.jniinchi.TestJniInchiOutput
[INFO] Running net.sf.jniinchi.TestJniInchiBond
[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.062 s - in net.sf.jniinchi.TestJniInchiBond
[INFO] Running net.sf.jniinchi.TestJniInchiInput
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.045 s - in net.sf.jniinchi.TestJniInchiInput
[INFO] 
[INFO] Results:
[INFO] 
[ERROR] Failures: 
[ERROR]   TestJniInchiWrapper.testCheckInchiInvalidPrefix:2269 expected:<INVALID_PREFIX> but was:<INVALID_LAYOUT>
[ERROR]   TestJniInchiWrapper.testCheckInchiInvalidVersion:2262 expected:<INVALID_VERSION> but was:<FAIL_I2I>
[ERROR]   TestJniInchiWrapper.testCheckInchiValidNonStd:2255 expected:<VALID_NON_STANDARD> but was:<INVALID_PREFIX>
[ERROR]   TestJniInchiWrapper.testStructureToInchiBug2085031b:2054 expected:<EOF> but was:<ERROR>
[ERROR]   TestJniInchiWrapper.testTooManyAtoms:2030 too many atoms
[ERROR] Errors: 
[ERROR]   TestExamples.testCheckInchi:162 » JniInchi Unknown return status: 6
[INFO] 
[ERROR] Tests run: 134, Failures: 5, Errors: 1, Skipped: 3
[INFO] 
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time:  01:40 min
[INFO] Finished at: 2024-09-05T08:52:41Z
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.22.3:test (default-test) on project jni-inchi: There are test failures.
[ERROR] 
[ERROR] Please refer to /<<PKGBUILDDIR>>/target/surefire-reports for the individual test results.
[ERROR] Please refer to dump files (if any exist) [date].dump, [date]-jvmRun[N].dump and [date].dumpstream.
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException

Cheers
-- 
Sebastian Ramacher



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