[Debichem-devel] Bug#1103427: pymatgen: autopkgtest regression: exit code 5

[Paul Gevers]

Source: pymatgen
Version: 2025.2.18+dfsg1-4
Severity: serious
User: debian-ci at lists.debian.org
Usertags: regression

Dear maintainer(s),

Your package has an autopkgtest, great. However, it fails in testing 
since very recently. Can you please investigate the situation and fix 
it? I copied some of the output at the bottom of this report.

The release team has announced [1] that failing autopkgtest on amd64 and 
arm64 are considered RC in testing.

More information about this bug and the reason for filing it can be 
found on 
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://lists.debian.org/debian-devel-announce/2019/07/msg00002.html

https://ci.debian.net/packages/p/pymatgen/testing/arm64/59950546/

2398s autopkgtest [12:46:34]: test test-pymatgen-net: 
[-----------------------
2398s running network tests with NET_TEST_LIST=test_get_structure_by_id
2399s ============================= test session starts 
==============================
2399s platform linux -- Python 3.13.2, pytest-8.3.5, pluggy-1.5.0 -- 
/usr/bin/python3.13
2399s cachedir: .pytest_cache
2399s rootdir: /tmp/autopkgtest-lxc.s1h8rca5/downtmp/build.1q4/src
2399s configfile: pyproject.toml
2399s plugins: typeguard-4.4.2
2427s collecting ... collected 3114 items / 3114 deselected / 8 skipped 
/ 0 selected
2427s
2427s =========================== short test summary info 
============================
2427s SKIPPED [1] tests/electronic_structure/test_boltztrap2.py:27: No 
boltztrap2
2427s SKIPPED [1] tests/ext/test_cod.py:25: www.crystallography.net is down
2427s SKIPPED [1] tests/ext/test_matproj.py:44: MP API is down
2427s SKIPPED [1] tests/io/test_openff.py:25: could not import 
'openff.toolkit': No module named 'openff'
2427s SKIPPED [1] tests/io/test_shengbte.py:10: could not import 
'f90nml': No module named 'f90nml'
2427s SKIPPED [1] tests/io/test_zeopp.py:20: zeo not installed
2427s SKIPPED [1] tests/performance/test_import_time.py:32: ref time 
only comparable in CI runner
2427s SKIPPED [1] tests/symmetry/test_kpath_hin.py:11: seekpath not 
installed
2427s ===================== 8 skipped, 3114 deselected in 28.65s 
=====================
2429s autopkgtest [12:47:05]: test test-pymatgen-net: 
-----------------------]
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