[Debichem-devel] Bug#1112713: avogadrolibs: FTBFS with CMake 4

Timo Röhling roehling at debian.org
Sun Aug 31 23:31:37 BST 2025 

Source: avogadrolibs
Version: 1.100.0-1
Severity: serious
Tags: ftbfs
Justification: FTBFS
User: cmake at packages.debian.org
Usertags: cmake-4

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Dear maintainer,

During a test rebuild for CMake 4, avogadrolibs failed to rebuild.

Log Summary:
- -------------------------------------------------------------------------------
[...]
//Qt feature: system_libb2 (from target Qt6::Core)
QT_FEATURE_system_libb2:INTERNAL=ON
//Qt feature: system_pcre2 (from target Qt6::Core)
QT_FEATURE_system_pcre2:INTERNAL=ON
//Qt feature: system_png (from target Qt6::Gui)
QT_FEATURE_system_png:INTERNAL=ON
//Qt feature: system_proxies (from target Qt6::Network)
QT_FEATURE_system_proxies:INTERNAL=ON
//Qt feature: system_textmarkdownreader (from target Qt6::Gui)
QT_FEATURE_system_textmarkdownreader:INTERNAL=ON
//Qt feature: system_xcb_xinput (from target Qt6::Gui)
QT_FEATURE_system_xcb_xinput:INTERNAL=ON
//Qt feature: system_zlib (from target Qt6::Core)
QT_FEATURE_system_zlib:INTERNAL=ON
//Qt feature: systemsemaphore (from target Qt6::Core)
QT_FEATURE_systemsemaphore:INTERNAL=ON
//Qt feature: systemtrayicon (from target Qt6::Gui)
QT_FEATURE_systemtrayicon:INTERNAL=ON
//Qt feature: sysv_sem (from target Qt6::Core)
QT_FEATURE_sysv_sem:INTERNAL=ON
//Qt feature: sysv_shm (from target Qt6::Core)
QT_FEATURE_sysv_shm:INTERNAL=ON
//Qt feature: tabbar (from target Qt6::Widgets)
QT_FEATURE_tabbar:INTERNAL=ON
//Qt feature: tabletevent (from target Qt6::Gui)
QT_FEATURE_tabletevent:INTERNAL=ON
//Qt feature: tableview (from target Qt6::Widgets)
QT_FEATURE_tableview:INTERNAL=ON
//Qt feature: tablewidget (from target Qt6::Widgets)
QT_FEATURE_tablewidget:INTERNAL=ON
//Qt feature: tabwidget (from target Qt6::Widgets)
QT_FEATURE_tabwidget:INTERNAL=ON
//Qt feature: temporaryfile (from target Qt6::Core)
QT_FEATURE_temporaryfile:INTERNAL=ON
//Qt feature: testlib (from target Qt6::Core)
QT_FEATURE_testlib:INTERNAL=ON
//Qt feature: textbrowser (from target Qt6::Widgets)
QT_FEATURE_textbrowser:INTERNAL=ON
//Qt feature: textdate (from target Qt6::Core)
QT_FEATURE_textdate:INTERNAL=ON
//Qt feature: textedit (from target Qt6::Widgets)
QT_FEATURE_textedit:INTERNAL=ON
//Qt feature: texthtmlparser (from target Qt6::Gui)
QT_FEATURE_texthtmlparser:INTERNAL=ON
//Qt feature: textmarkdownreader (from target Qt6::Gui)
QT_FEATURE_textmarkdownreader:INTERNAL=ON
//Qt feature: textmarkdownwriter (from target Qt6::Gui)
QT_FEATURE_textmarkdownwriter:INTERNAL=ON
//Qt feature: textodfwriter (from target Qt6::Gui)
QT_FEATURE_textodfwriter:INTERNAL=ON
//Qt feature: thread (from target Qt6::Core)
QT_FEATURE_thread:INTERNAL=ON
//Qt feature: threadsafe_cloexec (from target Qt6::Core)
QT_FEATURE_threadsafe_cloexec:INTERNAL=ON
//Qt feature: timezone (from target Qt6::Core)
QT_FEATURE_timezone:INTERNAL=ON
//Qt feature: timezone_locale (from target Qt6::Core)
QT_FEATURE_timezone_locale:INTERNAL=ON
//Qt feature: toolbar (from target Qt6::Widgets)
QT_FEATURE_toolbar:INTERNAL=ON
//Qt feature: toolbox (from target Qt6::Widgets)
QT_FEATURE_toolbox:INTERNAL=ON
//Qt feature: toolbutton (from target Qt6::Widgets)
QT_FEATURE_toolbutton:INTERNAL=ON
//Qt feature: tooltip (from target Qt6::Widgets)
QT_FEATURE_tooltip:INTERNAL=ON
//Qt feature: topleveldomain (from target Qt6::Network)
QT_FEATURE_topleveldomain:INTERNAL=ON
//Qt feature: translation (from target Qt6::Core)
QT_FEATURE_translation:INTERNAL=ON
//Qt feature: transposeproxymodel (from target Qt6::Core)
QT_FEATURE_transposeproxymodel:INTERNAL=ON
//Qt feature: treeview (from target Qt6::Widgets)
QT_FEATURE_treeview:INTERNAL=ON
//Qt feature: treewidget (from target Qt6::Widgets)
QT_FEATURE_treewidget:INTERNAL=ON
//Qt feature: trivial_auto_var_init_pattern (from target Qt6::Core)
QT_FEATURE_trivial_auto_var_init_pattern:INTERNAL=ON
//Qt feature: tslib (from target Qt6::Gui)
QT_FEATURE_tslib:INTERNAL=ON
//Qt feature: tuiotouch (from target Qt6::Gui)
QT_FEATURE_tuiotouch:INTERNAL=ON
//Qt feature: udpsocket (from target Qt6::Network)
QT_FEATURE_udpsocket:INTERNAL=ON
//Qt feature: undocommand (from target Qt6::Gui)
QT_FEATURE_undocommand:INTERNAL=ON
//Qt feature: undogroup (from target Qt6::Gui)
QT_FEATURE_undogroup:INTERNAL=ON
//Qt feature: undostack (from target Qt6::Gui)
QT_FEATURE_undostack:INTERNAL=ON
//Qt feature: undoview (from target Qt6::Widgets)
QT_FEATURE_undoview:INTERNAL=ON
//Qt feature: use_bfd_linker (from target Qt6::Core)
QT_FEATURE_use_bfd_linker:INTERNAL=OFF
//Qt feature: use_gold_linker (from target Qt6::Core)
QT_FEATURE_use_gold_linker:INTERNAL=OFF
//Qt feature: use_lld_linker (from target Qt6::Core)
QT_FEATURE_use_lld_linker:INTERNAL=OFF
//Qt feature: use_mold_linker (from target Qt6::Core)
QT_FEATURE_use_mold_linker:INTERNAL=OFF
//Qt feature: vaes (from target Qt6::Core)
QT_FEATURE_vaes:INTERNAL=OFF
//Qt feature: validator (from target Qt6::Gui)
QT_FEATURE_validator:INTERNAL=ON
//Qt feature: version_tagging (from target Qt6::Core)
QT_FEATURE_version_tagging:INTERNAL=ON
//Qt feature: vkgen (from target Qt6::Gui)
QT_FEATURE_vkgen:INTERNAL=ON
//Qt feature: vkkhrdisplay (from target Qt6::Gui)
QT_FEATURE_vkkhrdisplay:INTERNAL=ON
//Qt feature: vnc (from target Qt6::Gui)
QT_FEATURE_vnc:INTERNAL=ON
//Qt feature: vsp2 (from target Qt6::Gui)
QT_FEATURE_vsp2:INTERNAL=OFF
//Qt feature: vulkan (from target Qt6::Gui)
QT_FEATURE_vulkan:INTERNAL=ON
//Qt feature: wasm_exceptions (from target Qt6::Core)
QT_FEATURE_wasm_exceptions:INTERNAL=OFF
//Qt feature: wasm_simd128 (from target Qt6::Core)
QT_FEATURE_wasm_simd128:INTERNAL=OFF
//Qt feature: wayland (from target Qt6::Gui)
QT_FEATURE_wayland:INTERNAL=ON
//Qt feature: whatsthis (from target Qt6::Gui)
QT_FEATURE_whatsthis:INTERNAL=ON
//Qt feature: wheelevent (from target Qt6::Gui)
QT_FEATURE_wheelevent:INTERNAL=ON
//Qt feature: widgets (from target Qt6::Core)
QT_FEATURE_widgets:INTERNAL=ON
//Qt feature: widgettextcontrol (from target Qt6::Widgets)
QT_FEATURE_widgettextcontrol:INTERNAL=ON
//Qt feature: wizard (from target Qt6::Widgets)
QT_FEATURE_wizard:INTERNAL=ON
//Qt feature: x86intrin (from target Qt6::Core)
QT_FEATURE_x86intrin:INTERNAL=OFF
//Qt feature: xcb (from target Qt6::Gui)
QT_FEATURE_xcb:INTERNAL=ON
//Qt feature: xcb_egl_plugin (from target Qt6::Gui)
QT_FEATURE_xcb_egl_plugin:INTERNAL=ON
//Qt feature: xcb_glx (from target Qt6::Gui)
QT_FEATURE_xcb_glx:INTERNAL=ON
//Qt feature: xcb_glx_plugin (from target Qt6::Gui)
QT_FEATURE_xcb_glx_plugin:INTERNAL=ON
//Qt feature: xcb_native_painting (from target Qt6::Gui)
QT_FEATURE_xcb_native_painting:INTERNAL=OFF
//Qt feature: xcb_sm (from target Qt6::Gui)
QT_FEATURE_xcb_sm:INTERNAL=ON
//Qt feature: xcb_xlib (from target Qt6::Gui)
QT_FEATURE_xcb_xlib:INTERNAL=ON
//Qt feature: xkbcommon (from target Qt6::Gui)
QT_FEATURE_xkbcommon:INTERNAL=ON
//Qt feature: xkbcommon_x11 (from target Qt6::Gui)
QT_FEATURE_xkbcommon_x11:INTERNAL=ON
//Qt feature: xlib (from target Qt6::Gui)
QT_FEATURE_xlib:INTERNAL=ON
//Qt feature: xml (from target Qt6::Core)
QT_FEATURE_xml:INTERNAL=ON
//Qt feature: xmlstream (from target Qt6::Core)
QT_FEATURE_xmlstream:INTERNAL=ON
//Qt feature: xmlstreamreader (from target Qt6::Core)
QT_FEATURE_xmlstreamreader:INTERNAL=ON
//Qt feature: xmlstreamwriter (from target Qt6::Core)
QT_FEATURE_xmlstreamwriter:INTERNAL=ON
//Qt feature: xrender (from target Qt6::Gui)
QT_FEATURE_xrender:INTERNAL=OFF
//Qt feature: zstd (from target Qt6::Core)
QT_FEATURE_zstd:INTERNAL=ON
//STRINGS property for variable: QT_VERSION
QT_VERSION-STRINGS:INTERNAL=5;6
//ADVANCED property for variable: Vulkan_GLSLANG_VALIDATOR_EXECUTABLE
Vulkan_GLSLANG_VALIDATOR_EXECUTABLE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: Vulkan_GLSLC_EXECUTABLE
Vulkan_GLSLC_EXECUTABLE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: Vulkan_INCLUDE_DIR
Vulkan_INCLUDE_DIR-ADVANCED:INTERNAL=1
//ADVANCED property for variable: Vulkan_LIBRARY
Vulkan_LIBRARY-ADVANCED:INTERNAL=1
//CMAKE_INSTALL_PREFIX during last run
_GNUInstallDirs_LAST_CMAKE_INSTALL_PREFIX:INTERNAL=/usr
__pkg_config_checked_PKG_XKB:INTERNAL=1

dh_auto_configure: error: cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DUSE_HDF5=ON -DUSE_LIBMSYM=OFF -DUSE_MMTF=OFF -DOpenGL_GL_PREFERENCE=GLVND -DCMAKE_SKIP_RPATH=TRUE -DUSE_PYTHON=ON -DUSE_VTK=OFF -DUSE_QT=ON -DQT_VERSION=6 -DENABLE_TRANSLATIONS=ON -DUSE_QT_OPENGL=ON .. returned exit code 1
make[1]: *** [debian/rules:52: override_dh_auto_configure-arch] Error 2
make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.100.0'
make: *** [debian/rules:49: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
- --------------------------------------------------------------------------------
Build finished at 2025-08-29T14:09:20Z

- -------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here (for the next 30 days):
https://debusine.debian.net/artifact/2389012/

The most likely cause of build failures is the removed backwards compatibility for
CMake versions earlier than 3.5. You can find additional information in my
debian-devel announcement:

https://lists.debian.org/debian-devel/2025/04/msg00310.html

About the archive rebuild: The build was made on debusine.debian.net,
using sbuild.

You can find the build task here:
https://debusine.debian.net/work-request/152392/

If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.

Thanks,
Timo


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