[Debichem-devel] Bug#1093086: Bug#1093086: Bug#1093086: rdkit: FTBFS on big-endian architectures

[Michael Banck]

Hi,

On Wed, Jan 15, 2025 at 04:56:10PM +0200, Andrius Merkys wrote:
> On 2025-01-15 09:54, Andrius Merkys wrote:
> >  From a quick glance it seems that a lot of problems are related to
> > Python pickle reading. Upstream has made some fixes related to
> > endianness in version 202409.4 [1], thus packaging the newer upstream
> > version might mitigate the problem.
> > 
> > [1] https://github.com/rdkit/rdkit/pull/8105
> 
> I gave packaging 202409.4 a shot, but the build failed with the following:
> 
> sphinx-build -b latex -d _build/doctrees   . _build/latex
> 
> [snip]
> 
> resolving references...
> /home/andrius/debian-packages/rdkit/Docs/Book/GettingStartedWithContributing.md:271:
> WARNING: 'myst' cross-reference target not found:
> 'building-rdkit-for-development' [myst.xref_missing]
> processing RDKit.tex: failed
> 
> Extension error:
> convert exited with error:
> [stderr]
> b"convert: non-conforming drawing primitive definition `stroke-dasharray' @
> error/draw.c/RenderMVGContent/4548.\n"
> [stdout]
> b''
> 
> Currently I have no idea how to deal with it.

Doesn't ring a bell to me either, but I'll try to take a look as well.


Michael