[Debichem-devel] Bug#1100686: /usr/bin/xcrysden: Cannot launch xcrysden
Visuwesh
visuweshm at gmail.com
Mon Mar 17 10:02:09 GMT 2025
Package: xcrysden
Version: 1.6.2-4
Severity: important
File: /usr/bin/xcrysden
Dear Maintainer,
I cannot launch xcrysden (with or w/o args),
% xcrysden
+-----------------------------------------------------------------+
|*****************************************************************|
|* *|
|* XCrySDen -- (X-Window) CRYstalline Structures and DENsities *|
|* = === = === *|
|*---------------------------------------------------------------*|
|* *|
|* Anton Kokalj (tone.kokalj at ijs.si) *|
|* Jozef Stefan Institute, Ljubljana, Slovenia *|
|* *|
|* Copyright (c) 1996--2019 by Anton Kokalj *|
|* *|
|*****************************************************************|
+-----------------------------------------------------------------+
Version: 1.6.2
Please report bugs to: tone.kokalj at ijs.si
TERMS OF USE:
-------------
XCRYSDEN is released under the GNU General Public License.
Whenever graphics generated by XCRYSDEN are used in scientific
publications, it shall be greatly appreciated to include an explicit
reference. The preferred form is the following:
[ref] A. Kokalj, J. Mol. Graph. Model., Vol. 17, pp. 176-179, 1999.
Code available from http://www.xcrysden.org/.
XCRYSDEN_TOPDIR=/usr/share/xcrysden
XCRYSDEN_SCRATCH=/tmp
Running on platform : unix
Operating system : Linux
Package Ppmtompeg: /usr/bin/ppmtompeg
Package Xwd: /usr/bin/xwd
Executing: /usr/lib/xcrysden/ftnunit
X Error of failed request: BadWindow (invalid Window parameter)
Major opcode of failed request: 3
ResourceID in failed request: 0xffffffff
Serial number of failed request: 937
X Error of failed request: BadWindow (invalid Window parameter)
Major opcode of failed request: 3
ResourceID in failed request: 0xffffffff
Serial number of failed request: 939
Error in startup script:
Couldn't configure togl widget
while executing
"togl .mesa -width 400 -height 400 -ident .mesa -rgba $toglOpt(rgba) -redsize $toglOpt(redsize..."
(procedure "PlaceGlobWin" line 107)
invoked from within
"PlaceGlobWin 0 [expr round(670 * $fac1)] [expr round(670 * $fac1)]"
(procedure "ViewMol" line 25)
invoked from within
"ViewMol ."
invoked from within
"if { [llength $argv] > 2 } {
parseComLinArg [lrange $argv 2 end]
} else {
ViewMol .
}"
(file "/usr/share/xcrysden/Tcl/xcInit.tcl" line 633)
The same error is shown if I launch the binary downloaded from
http://www.xcrysden.org/Download.html:
% pwd
/home/viz/tmp/xcrysden-1.6.2-bin-shared
% ./xcrysden
+-----------------------------------------------------------------+
|*****************************************************************|
|* *|
|* XCrySDen -- (X-Window) CRYstalline Structures and DENsities *|
|* = === = === *|
|*---------------------------------------------------------------*|
|* *|
|* Anton Kokalj (tone.kokalj at ijs.si) *|
|* Jozef Stefan Institute, Ljubljana, Slovenia *|
|* *|
|* Copyright (c) 1996--2019 by Anton Kokalj *|
|* *|
|*****************************************************************|
+-----------------------------------------------------------------+
Version: 1.6.2
Please report bugs to: tone.kokalj at ijs.si
TERMS OF USE:
-------------
XCRYSDEN is released under the GNU General Public License.
Whenever graphics generated by XCRYSDEN are used in scientific
publications, it shall be greatly appreciated to include an explicit
reference. The preferred form is the following:
[ref] A. Kokalj, J. Mol. Graph. Model., Vol. 17, pp. 176-179, 1999.
Code available from http://www.xcrysden.org/.
XCRYSDEN_TOPDIR=/home/viz/tmp/xcrysden-1.6.2-bin-shared
XCRYSDEN_SCRATCH=/tmp
Running on platform : unix
Operating system : Linux
Package Ppmtompeg: /usr/bin/ppmtompeg
Package Xwd: /usr/bin/xwd
Executing: /home/viz/tmp/xcrysden-1.6.2-bin-shared/bin/ftnunit
X Error of failed request: BadWindow (invalid Window parameter)
Major opcode of failed request: 3
ResourceID in failed request: 0xffffffff
Serial number of failed request: 933
X Error of failed request: BadWindow (invalid Window parameter)
Major opcode of failed request: 3
ResourceID in failed request: 0xffffffff
Serial number of failed request: 935
Error in startup script:
Couldn't configure togl widget
while executing
"togl .mesa -width 400 -height 400 -ident .mesa -rgba $toglOpt(rgba) -redsize $toglOpt(redsize..."
(procedure "PlaceGlobWin" line 107)
invoked from within
"PlaceGlobWin 0 [expr round(670 * $fac1)] [expr round(670 * $fac1)]"
(procedure "ViewMol" line 25)
invoked from within
"ViewMol ."
invoked from within
"if { [llength $argv] > 2 } {
parseComLinArg [lrange $argv 2 end]
} else {
ViewMol .
}"
(file "/home/viz/tmp/xcrysden-1.6.2-bin-shared/Tcl/xcInit.tcl" line 633)
I'm using Xfce4 if it matters.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: amd64 (x86_64)
Kernel: Linux 6.12.13-amd64 (SMP w/4 CPU threads; PREEMPT)
Kernel taint flags: TAINT_USER
Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages xcrysden depends on:
ii bwidget 1.10.1-1
ii gawk 1:5.2.1-2+b1
ii graphicsmagick-imagemagick-compat [imagemagick] 1.4+really1.3.45-1
ii libc6 2.40-7
ii libfftw3-double3 3.3.10-2+b1
ii libgfortran5 14.2.0-17
ii libgl1 1.7.0-1+b2
ii libgl2ps1.4 1.4.2+dfsg1-2
ii libglu1-mesa [libglu1] 9.0.2-1.1+b3
ii libtcl8.6 8.6.16+dfsg-1
ii libtk8.6 8.6.16-1
ii libtogl2 2.0-3
ii libx11-6 2:1.8.10-2
ii openbabel 3.1.1+dfsg-11+b3
ii xcrysden-data 1.6.2-4
xcrysden recommends no packages.
Versions of packages xcrysden suggests:
pn gifsicle <none>
pn mencoder <none>
ii netpbm 2:11.09.02-2
ii x11-apps 7.7+11+b1
-- no debconf information
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