[Debichem-devel] Bug#1128174: smiles-scripts: FTBFS with default Java 25

[Vladimir Petko]

Source: smiles-scripts
Severity: normal
Tags: ftbfs
Usertags: default-java25

Dear Maintainers,

The package smiles-scripts ftbfs with default Java 25.
The relevant part of the build log:
---------------
tests/cases/cdksdf2inchi_005.sh:                   FAILED:
0a1,5
> WARNING: A restricted method in java.lang.System has been called
> WARNING: java.lang.System::load has been called by com.sun.jna.Native in an unnamed module (file:/usr/share/java/jna.jar)
> WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
> WARNING: Restricted methods will be blocked in a future release unless native access is enabled
>
tests/cases/cdksdf2inchi_006.inp:                  OK
tests/cases/cdksdf2smiles_001.opt:                 FAILED:
0a1,5
> WARNING: A restricted method in java.lang.System has been called
> WARNING: java.lang.System::load has been called by com.sun.jna.Native in an unnamed module (file:/usr/share/java/jna.jar)
> WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
> WARNING: Restricted methods will be blocked in a future release unless native access is enabled
>
tests/cases/cdksdf2smiles_002.inp:                 OK
tests/cases/cdksdf2smiles_003.inp:                 OK
tests/cases/cdksdf2smiles_004.inp:                 OK
tests/cases/cdksdf2smiles_005.inp:                 FAILED:
0a1,5
> WARNING: A restricted method in java.lang.System has been called
> WARNING: java.lang.System::load has been called by com.sun.jna.Native in an unnamed module (file:/usr/share/java/jna.jar)
> WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
> WARNING: Restricted methods will be blocked in a future release unless native access is enabled
>
tests/cases/cdksdf2smiles_006.inp:                 OK
.....
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2026-02-13T03:41:28Z
---------------


-- System Information:
Debian Release: forky/sid
  APT prefers questing-updates
  APT policy: (500, 'questing-updates'), (500, 'questing-security'), (500, 'questing'), (100, 'questing-backports')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 6.17.0-12-generic (SMP w/32 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_WARN, TAINT_OOT_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE=en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled