[Debichem-devel] Bug#1125606: lapackpp: FTBFS with CMake 4.2
Santiago Vila
sanvila at debian.org
Thu Jan 15 14:39:41 GMT 2026
Package: src:lapackpp
Version: 2024.10.26-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
(Note: I'm assuming that the failure happens because of CMake 4.2,
but I may be wrong).
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202601/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:lapackpp, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem=cmake
dh_auto_clean -O--buildsystem=cmake
dh_autoreconf_clean -O--buildsystem=cmake
dh_clean -O--buildsystem=cmake
debian/rules binary
dh binary --buildsystem=cmake
dh_update_autotools_config -O--buildsystem=cmake
dh_autoreconf -O--buildsystem=cmake
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- \
[... snipped ...]
//If set, runtime paths are not added when installing shared libraries,
// but are added when building.
CMAKE_SKIP_INSTALL_RPATH:BOOL=NO
//If set, runtime paths are not added when using shared libraries.
CMAKE_SKIP_RPATH:BOOL=NO
//Flags used by the archiver during the creation of static libraries
// during all build types.
CMAKE_STATIC_LINKER_FLAGS:STRING=
//Flags used by the archiver during the creation of static libraries
// during DEBUG builds.
CMAKE_STATIC_LINKER_FLAGS_DEBUG:STRING=
//Flags used by the archiver during the creation of static libraries
// during MINSIZEREL builds.
CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL:STRING=
//Flags used by the archiver during the creation of static libraries
// during RELEASE builds.
CMAKE_STATIC_LINKER_FLAGS_RELEASE:STRING=
//Flags used by the archiver during the creation of static libraries
// during RELWITHDEBINFO builds.
CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO:STRING=
//Path to a program.
CMAKE_STRIP:FILEPATH=/usr/bin/strip
//Path to a program.
CMAKE_TAPI:FILEPATH=CMAKE_TAPI-NOTFOUND
//If this value is on, makefiles will be generated without the
// .SILENT directive, and all commands will be echoed to the console
// during the make. This is useful for debugging only. With Visual
// Studio IDE projects all commands are done without /nologo.
CMAKE_VERBOSE_MAKEFILE:BOOL=ON
//Path to a program.
CUDAToolkit_NVCC_EXECUTABLE:FILEPATH=CUDAToolkit_NVCC_EXECUTABLE-NOTFOUND
//Path to a file.
CUDAToolkit_SENTINEL_FILE:FILEPATH=CUDAToolkit_SENTINEL_FILE-NOTFOUND
//No help, variable specified on the command line.
FETCHCONTENT_FULLY_DISCONNECTED:UNINITIALIZED=ON
//The directory containing a CMake configuration file for MKL.
MKL_DIR:PATH=MKL_DIR-NOTFOUND
//CXX compiler flags for OpenMP parallelization
OpenMP_CXX_FLAGS:STRING=-fopenmp
//CXX compiler libraries for OpenMP parallelization
OpenMP_CXX_LIB_NAMES:STRING=gomp;pthread
//Path to the gomp library for OpenMP
OpenMP_gomp_LIBRARY:FILEPATH=/usr/lib/gcc/x86_64-linux-gnu/15/libgomp.so
//Path to the pthread library for OpenMP
OpenMP_pthread_LIBRARY:FILEPATH=/usr/lib/x86_64-linux-gnu/libpthread.a
//The directory containing a CMake configuration file for blaspp.
blaspp_DIR:PATH=/usr/lib/x86_64-linux-gnu/cmake/blaspp
//Build test suite
build_tests:BOOL=ON
//Use ANSI color output
color:BOOL=ON
//GPU backend to use
gpu_backend:STRING=auto
//LAPACK library to search for. Often, LAPACK is included in the
// BLAS library (e.g., -lopenblas contains both).
lapack:STRING=auto
//Value Computed by CMake
lapackpp_BINARY_DIR:STATIC=/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
//Value Computed by CMake
lapackpp_IS_TOP_LEVEL:STATIC=ON
//Value Computed by CMake
lapackpp_SOURCE_DIR:STATIC=/<<PKGBUILDDIR>>
//Shorthand for CMAKE_MESSAGE_LOG_LEVEL
log:STRING=
//The directory containing a CMake configuration file for rocblas.
rocblas_DIR:PATH=rocblas_DIR-NOTFOUND
//The directory containing a CMake configuration file for rocsolver.
rocsolver_DIR:PATH=rocsolver_DIR-NOTFOUND
//Use CMake's find_package( LAPACK ) rather than the search in
// LAPACK++
use_cmake_find_lapack:BOOL=OFF
########################
# INTERNAL cache entries
########################
//STRINGS property for variable: BLA_VENDOR
BLA_VENDOR-STRINGS:INTERNAL=;All;Goto;OpenBLAS;FLAME;ATLAS;IBMESSL;Intel10_32;Intel10_64lp;Intel10_64lp_seq;Intel10_64ilp;Intel10_64ilp_seq;Intel10_64_dyn;Apple;NAS;Arm;Arm_mp;Arm_ilp64;Arm_ilp64_mp;Generic
//ADVANCED property for variable: CMAKE_ADDR2LINE
CMAKE_ADDR2LINE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_AR
CMAKE_AR-ADVANCED:INTERNAL=1
//STRINGS property for variable: CMAKE_BUILD_TYPE
CMAKE_BUILD_TYPE-STRINGS:INTERNAL=None;Debug;Release;RelWithDebInfo;MinSizeRel
//This is the directory where this CMakeCache.txt was created
CMAKE_CACHEFILE_DIR:INTERNAL=/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu
//Major version of cmake used to create the current loaded cache
CMAKE_CACHE_MAJOR_VERSION:INTERNAL=4
//Minor version of cmake used to create the current loaded cache
CMAKE_CACHE_MINOR_VERSION:INTERNAL=2
//Patch version of cmake used to create the current loaded cache
CMAKE_CACHE_PATCH_VERSION:INTERNAL=1
//ADVANCED property for variable: CMAKE_COLOR_MAKEFILE
CMAKE_COLOR_MAKEFILE-ADVANCED:INTERNAL=1
//Path to CMake executable.
CMAKE_COMMAND:INTERNAL=/usr/bin/cmake
//Path to cpack program executable.
CMAKE_CPACK_COMMAND:INTERNAL=/usr/bin/cpack
//Path to ctest program executable.
CMAKE_CTEST_COMMAND:INTERNAL=/usr/bin/ctest
//ADVANCED property for variable: CMAKE_CXX_COMPILER
CMAKE_CXX_COMPILER-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_CXX_COMPILER_AR
CMAKE_CXX_COMPILER_AR-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_CXX_COMPILER_RANLIB
CMAKE_CXX_COMPILER_RANLIB-ADVANCED:INTERNAL=1
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CMAKE_CXX_FLAGS-ADVANCED:INTERNAL=1
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CMAKE_CXX_FLAGS_DEBUG-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_CXX_FLAGS_MINSIZEREL
CMAKE_CXX_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_CXX_FLAGS_RELEASE
CMAKE_CXX_FLAGS_RELEASE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_CXX_FLAGS_RELWITHDEBINFO
CMAKE_CXX_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_DLLTOOL
CMAKE_DLLTOOL-ADVANCED:INTERNAL=1
//Executable file format
CMAKE_EXECUTABLE_FORMAT:INTERNAL=ELF
//ADVANCED property for variable: CMAKE_EXE_LINKER_FLAGS
CMAKE_EXE_LINKER_FLAGS-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_EXE_LINKER_FLAGS_DEBUG
CMAKE_EXE_LINKER_FLAGS_DEBUG-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_EXE_LINKER_FLAGS_MINSIZEREL
CMAKE_EXE_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1
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CMAKE_EXE_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO
CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_EXPORT_COMPILE_COMMANDS
CMAKE_EXPORT_COMPILE_COMMANDS-ADVANCED:INTERNAL=1
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CMAKE_EXTRA_GENERATOR:INTERNAL=
//Name of generator.
CMAKE_GENERATOR:INTERNAL=Unix Makefiles
//Generator instance identifier.
CMAKE_GENERATOR_INSTANCE:INTERNAL=
//Name of generator platform.
CMAKE_GENERATOR_PLATFORM:INTERNAL=
//Name of generator toolset.
CMAKE_GENERATOR_TOOLSET:INTERNAL=
//Source directory with the top level CMakeLists.txt file for this
// project
CMAKE_HOME_DIRECTORY:INTERNAL=/<<PKGBUILDDIR>>
//Install .so files without execute permission.
CMAKE_INSTALL_SO_NO_EXE:INTERNAL=1
//ADVANCED property for variable: CMAKE_LINKER
CMAKE_LINKER-ADVANCED:INTERNAL=1
//Name of CMakeLists files to read
CMAKE_LIST_FILE_NAME:INTERNAL=CMakeLists.txt
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CMAKE_MAKE_PROGRAM-ADVANCED:INTERNAL=1
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CMAKE_MODULE_LINKER_FLAGS-ADVANCED:INTERNAL=1
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CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_MODULE_LINKER_FLAGS_RELEASE
CMAKE_MODULE_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO
CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_NM
CMAKE_NM-ADVANCED:INTERNAL=1
//number of local generators
CMAKE_NUMBER_OF_MAKEFILES:INTERNAL=1
//ADVANCED property for variable: CMAKE_OBJCOPY
CMAKE_OBJCOPY-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_OBJDUMP
CMAKE_OBJDUMP-ADVANCED:INTERNAL=1
//Platform information initialized
CMAKE_PLATFORM_INFO_INITIALIZED:INTERNAL=1
//ADVANCED property for variable: CMAKE_RANLIB
CMAKE_RANLIB-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_READELF
CMAKE_READELF-ADVANCED:INTERNAL=1
//Path to CMake installation.
CMAKE_ROOT:INTERNAL=/usr/share/cmake-4.2
//ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS
CMAKE_SHARED_LINKER_FLAGS-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_DEBUG
CMAKE_SHARED_LINKER_FLAGS_DEBUG-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL
CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_RELEASE
CMAKE_SHARED_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO
CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SKIP_INSTALL_RPATH
CMAKE_SKIP_INSTALL_RPATH-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_SKIP_RPATH
CMAKE_SKIP_RPATH-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS
CMAKE_STATIC_LINKER_FLAGS-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_DEBUG
CMAKE_STATIC_LINKER_FLAGS_DEBUG-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL
CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_RELEASE
CMAKE_STATIC_LINKER_FLAGS_RELEASE-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO
CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_STRIP
CMAKE_STRIP-ADVANCED:INTERNAL=1
//ADVANCED property for variable: CMAKE_TAPI
CMAKE_TAPI-ADVANCED:INTERNAL=1
//uname command
CMAKE_UNAME:INTERNAL=/usr/bin/uname
//ADVANCED property for variable: CMAKE_VERBOSE_MAKEFILE
CMAKE_VERBOSE_MAKEFILE-ADVANCED:INTERNAL=1
//Details about finding OpenMP
FIND_PACKAGE_MESSAGE_DETAILS_OpenMP:INTERNAL=[TRUE][ ][v4.5()]
//Details about finding OpenMP_CXX
FIND_PACKAGE_MESSAGE_DETAILS_OpenMP_CXX:INTERNAL=[-fopenmp][/usr/lib/gcc/x86_64-linux-gnu/15/libgomp.so][/usr/lib/x86_64-linux-gnu/libpthread.a][v4.5()]
//Test FSYCL_SUPPORT
FSYCL_SUPPORT:INTERNAL=
LAPACK_LIBRARIES:INTERNAL=
//Result of TRY_COMPILE
OpenMP_COMPILE_RESULT_CXX_fopenmp:INTERNAL=TRUE
//ADVANCED property for variable: OpenMP_CXX_FLAGS
OpenMP_CXX_FLAGS-ADVANCED:INTERNAL=1
//ADVANCED property for variable: OpenMP_CXX_LIB_NAMES
OpenMP_CXX_LIB_NAMES-ADVANCED:INTERNAL=1
//CXX compiler's OpenMP specification date
OpenMP_CXX_SPEC_DATE:INTERNAL=201511
//Result of TRY_COMPILE
OpenMP_SPECTEST_CXX_:INTERNAL=TRUE
//ADVANCED property for variable: OpenMP_gomp_LIBRARY
OpenMP_gomp_LIBRARY-ADVANCED:INTERNAL=1
//ADVANCED property for variable: OpenMP_pthread_LIBRARY
OpenMP_pthread_LIBRARY-ADVANCED:INTERNAL=1
//Result of TRY_COMPILE
compile_result:INTERNAL=FALSE
//STRINGS property for variable: gpu_backend
gpu_backend-STRINGS:INTERNAL=auto;cuda;hip;sycl;none
//STRINGS property for variable: lapack
lapack-STRINGS:INTERNAL=auto;generic
lapack_cached:INTERNAL=auto
lapack_libraries_cached:INTERNAL=
//STRINGS property for variable: log
log-STRINGS:INTERNAL=FATAL_ERROR;SEND_ERROR;WARNING;AUTHOR_WARNING;DEPRECATION;NOTICE;STATUS;VERBOSE;DEBUG;TRACE
dh_auto_configure: error: cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE= -DBUILD_SHARED_LIBS=NO .. returned exit code 1
make[1]: *** [debian/rules:25: override_dh_auto_configure] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:22: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2
--------------------------------------------------------------------------------
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