[Neurodebian-users] condor: dependency on versioned libraries?

Tiziano Zito opossumnano at gmail.com
Fri Aug 5 12:23:45 UTC 2011


hi all,

trying to submit a condor job consisting of a matlab script in a
debian squeeze 64bit system with condor 7.6.0-1~nd60+1, we get the
following error:

condor_submit: /opt/matlab/R2011a/sys/os/glnxa64/libstdc++.so.6: version `GLIBCXX_3.4.11' not found (required by /usr/lib/libclassad_ns.so.1)
condor_submit: /opt/matlab/R2011a/sys/os/glnxa64/libstdc++.so.6: version `GLIBCXX_3.4.11' not found (required by /usr/lib/condor/libutils.so)

as far as I understand, matlab is putting in front of the system
LD_LIBRARY_PATH its own paths. in fact, running !env within matlab
reveals 
LD_LIBRARY_PATH=/opt/matlab/R2011a/sys/os/glnxa64:/opt/matlab/R2011a/bin/glnxa64:/opt/matlab/R2011a/extern/lib/glnxa64:/opt/matlab/R2011a/runtime/glnxa64:/opt/matlab/R2011a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/opt/matlab/R2011a/sys/java/jre/glnxa64/jre/lib/amd64/server:/opt/matlab/R2011a/sys/java/jre/glnxa64/jre/lib/amd64

is this a problem for condor? why? 

thank you for any hints,
tiziano






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