[Neurodebian-users] debruijn malloc error

[Geoffrey K Aguirre]

Antti -- I can't speak to the troubles with the debruijn code in debian, but we do have a compiled version of the software available for Mac OS X

	https://cfn.upenn.edu/aguirre/wiki/public:de_bruijn_software

Geoff


On Jul 2, 2013, at 9:06 AM, Antti Korvenoja <antti.korvenoja at helsinki.fi> wrote:

> Dear developers,
> 
> I'm trying to run debruijn on jessie. Using a guide function leads to
> output below.
> 
> debruijn 5 2 5 HRF neural.txt -eval 5000
> 
> Using a Hemodynamic Response Filter as a guide function.
> The SOA used here is: 5000
> 
> 
> 
> Cycle found:
> ------------
> 0,2,4,1,1,4,3,2,0,4,4,0,1,2,1,0,3,4,2,2,3,3,1,3,0
> ------------
> Valid sequence 
> 
> debruijn: malloc.c:3616: _int_malloc: Assertion `(unsigned long)(size)
>> = (unsigned long)(nb)' failed.
> Aborted
> 
> debruijn 5 2 runs without error as well as e.g. debruijn 5 3 5 HRF
> neural.txt -eval 5000.
> 
> Thank you for your help,
> 
> Antti
> 
> 
> 
> _______________________________________________
> Neurodebian-users mailing list
> Neurodebian-users at lists.alioth.debian.org
> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/neurodebian-users


--

Geoffrey Karl Aguirre, M.D., Ph.D.
https://cfn.upenn.edu/aguirre
Associate Professor of Neurology
Hospital of the University of Pennsylvania
Philadelphia, PA