[Neurodebian-users] fslview for Ubuntu 14.04

Yaroslav Halchenko debian at onerussian.com
Sun May 4 14:35:07 UTC 2014


On Fri, 02 May 2014, Robert Kelly wrote:

>    The fslview function, a part of fsl, does not work for version
>    4.0.1-2~nd13.04+1+nd13.10+1+nd14.04+1 installed on Ubuntu 14.04.  The
>    program is invoked with the command “fslview” and “fslview BRAIN” (where
>    BRAIN is a brain image to be viewed), and it can be quit from the Unity
>    Launcher on the left of the screen, but no display window opens to allow
>    viewing of images.  I installed fslview the first time as part of the
>    fsl-complete package, but an attempt to reinstall fslview alone did
>    nothing because the fslview package was completely up-to-date.  Please fix
>    and/or suggest a work-around.

- was fslview working before with exactly the same "BRAIN" file? (does
  it have proper extension?)

- "it works for me" -- installed 14.04 in virtualbox and here is the
  proof of the fact:
  http://www.onerussian.com/tmp/gkrellShoot_05-04-14_103146.png

- what datatype of that BRAIN file? (nib-ls -v BRAIN should let you know
  quickly if you have python-nibabel package installed)

- you might need to share the BRAIN for us to replicate/fix/work-around

-- 
Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Research Scientist,            Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        



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