[Neurodebian-users] Problem with fslview installation

[marco tettamanti]

Dear neurodebianers,
a problem with fslview arose a couple of days ago with a dist-upgrade on my
Debian Testing installation:

Linux bll4 4.9.0-2-amd64 #1 SMP Debian 4.9.13-1 (2017-02-27) x86_64 GNU/Linux


apt-get dist-upgrade removed fslview:

root at bll4:~$ apt-get -s dist-upgrade
Reading package lists... Done
Building dependency tree
Reading state information... Done
Calculating upgrade... Done
...
The following packages will be REMOVED:
   fslview libopenmpi1.6 libvtk5.8 libvtk5.8-qt4
....
Remv fslview [4.0.1-7~nd80+1]
Remv libvtk5.8-qt4 [5.8.0-17.5]
Remv libvtk5.8 [5.8.0-17.5]
Remv libopenmpi1.6 [1.6.5-9.1]


I could not find a way to install it back.

root at bll4:~$ apt-get -s install fslview
Reading package lists... Done
Building dependency tree
Reading state information... Done
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

The following packages have unmet dependencies:
  fslview : Depends: libnewmat10ldbl but it is not going to be installed
            Depends: libqt4-qt3support (>= 4:4.5.3) but it is not going to be
installed
            Depends: libqt4-xml (>= 4:4.5.3) but it is not going to be installed
            Depends: libqtcore4 (>= 4:4.7.0~beta1) but it is not going to be
installed
            Depends: libqtgui4 (>= 4:4.7.0~beta1) but it is not going to be
installed
            Depends: libqwt5-qt4 but it is not going to be installed
            Depends: libstdc++6 (>= 4.9) but it is not going to be installed
            Depends: libvtk5.8 but it is not installable
            Depends: libvtk5.8-qt4 but it is not installable
            Recommends: qt-assistant-compat but it is not going to be installed
E: Unable to correct problems, you have held broken packages.


Any help is appreciated. Thank you and best wishes,
Marco

> Dear neurodebian developers,
> I am encountering a problem with mipav installed from neurodebian. I have the
> same problem on two different architectures:
> - a 64bit debian stable Linux bll1 2.6.32-marco #1 SMP Mon Feb 21 16:14:52 CET
> 2011 x86_64 GNU/Linux
> - and a 32bit debian testing Linux bll4 3.0.0-1-686-pae #1 SMP Sun Jul 24
> 14:27:32 UTC 2011 i686 GNU/Linux
>
> Basically, changes in the Memory Allocation (Maximum Heap Size), even though
> they are perfomed as root, do not have any effects. The memory limit displayed
> on top right of the menu bar remains around 245 M, independently of the
> allocated memory size.
>
> This is a big problem for memory consuming processes that will not be performed
> due to insufficient memory allocation. I have not found any workaround to the
> problem, which I didn't experience when dowloading the Mipav installer directly
> from http://mipav.cit.nih.gov/.
>
> Can you please have a look at this?
>
> Thank you and very best wishes,
> Marco

--
Marco Tettamanti, Ph.D.
Nuclear Medicine Department & Division of Neuroscience
IRCCS San Raffaele Scientific Institute
Via Olgettina 58
I-20132 Milano, Italy
Phone ++39-02-26434888
Fax ++39-02-26434892
Email: tettamanti.marco at hsr.it
Skype: mtettamanti
http://scholar.google.it/citations?user=x4qQl4AAAAAJ



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