[Piuparts-devel] Bug#705847: python-rpy fails to import
Dirk Eddelbuettel
edd at debian.org
Sat Apr 20 23:34:11 UTC 2013
On 20 April 2013 at 19:05, Dave Steele wrote:
| On Sat, Apr 20, 2013 at 6:38 PM, Dave Steele <dsteele at gmail.com> wrote:
| > On Sat, Apr 20, 2013 at 6:10 PM, Dirk Eddelbuettel <edd at debian.org> wrote:
| >>
| >> On 20 April 2013 at 17:27, Dave Steele wrote:
| >
| > Can you provide some pointers to an R neophyte on how to proceed?
| >
| > 1 - https://github.com/davesteele/piuparts/blob/develop/piuparts-report.py#L1062
|
| Reading a little documentation can be dangerous. I got it working by
| replacing the r's with (rpy2.)robjects.r, and by commenting out the
| pallette and dev_off calls. Otherwise, I got X11 device errors. Oddly,
| the colors still seem right.
|
| Is this a valid strategy, or am I missing something?
Here is another route: I just disable (!!) the PrintWarnings() calls (that
want the no-longer-exported Rf_PrintWarnings() function:
edd at max:~/svn/rpy$ svn di
Index: src/RPy.h
===================================================================
--- src/RPy.h (revision 796)
+++ src/RPy.h (working copy)
@@ -88,8 +88,8 @@
# define CleanEd Rf_CleanEd
extern void CleanEd(void);
extern int R_CollectWarnings;
-# define PrintWarnings Rf_PrintWarnings
-extern void PrintWarnings(void);
+//# define PrintWarnings Rf_PrintWarnings
+//extern void PrintWarnings(void);
/****/
#include <signal.h>
Index: src/rpymodule.c
===================================================================
--- src/rpymodule.c (revision 796)
+++ src/rpymodule.c (working copy)
@@ -1180,7 +1180,7 @@
obj = to_Pyobj_with_mode(res, conv);
UNPROTECT(2);
- PrintWarnings(); /* show any warning messages */
+ //PrintWarnings(); /* show any warning messages */
return obj;
}
@@ -1801,7 +1801,7 @@
}
#endif
- PrintWarnings(); /* from device close and .Last */
+ //PrintWarnings(); /* from device close and .Last */
R_gc(); /* Remove any remaining R objects from memory */
}
edd at max:~/svn/rpy$
And now things work:
edd at max:~/svn/rpy$ python
Python 2.7.3 (default, Sep 26 2012, 21:51:14)
[GCC 4.7.2] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> import rpy
>>>
Shall we do that?
Dirk
--
Dirk Eddelbuettel | edd at debian.org | http://dirk.eddelbuettel.com
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