[Pkg-exppsy-pymvpa] consult - Open no-header images

Marco Zanger marcozanger at gmail.com
Fri Apr 4 15:18:51 UTC 2008


Hi,

I'm current having a problem trying to open nifti images I've created
without a header. This image is a "mask" I created using mipav, and i need
to open it though it has no header. any suggestion?

Regards,
Marco

The traceback is this:

** ERROR (nifti_image_read): cannot create nifti image from header
'mask.nii'
Traceback (most recent call last):
  File "/home/marcozanger/workspace/MRISegment/src/MRI/ParseOptimized.py",
line 333, in <module>
ERROR, UNEXPECTED EXCEPTION
Error while opening nifti header.
    main()
  File "/home/marcozanger/workspace/MRISegment/src/MRI/ParseOptimized.py",
line 269, in main
    mask = NiftiImage('mask')
  File "/usr/lib/python2.5/site-packages/nifti/niftiimage.py", line 322, in
__init__
    self.__newFromFile( source, load )
  File "/usr/lib/python2.5/site-packages/nifti/niftiimage.py", line 417, in
__newFromFile
    raise RuntimeError, "Error while opening nifti header."
RuntimeError: Error while opening nifti header.
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