[pymvpa] macports install libsvm issue

[Grega Repovs]

Hello,

Here is another "vote" for the same error when trying to do:

sudo port install py26-pymvpa

on Leopard (Mac OS X 10.5).
Any ideas on how to resolve the issue?

Thanks,

Grega Repovs


On Dec 28, 2009, at 7:00 PM, John Clithero wrote:

> Hi everyone,
> 
> I am also now trying to use MacPorts 1.8.1 on Snow Leopard to install PyMVPA.
> Using:
> 
> sudo port install py26-pymvpa
> 
> everything seems to go well until it tries to build pymvpa...might
> this be related to the only version of libsvm I see on MacPorts is
> libsvm 2.9 and not 2.8x?
> Any ideas?
> Errors are below.
> Thanks,
> John
> 
> --->  Computing dependencies for py26-pymvpa
> --->  Building py26-pymvpa
> Error: Target org.macports.build returned: shell command " cd
> "/opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_ports_python_py26-pymvpa/work/py26-pymvpa-0.4.3"
> && /opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6
> setup.py --no-user-cfg build_ext --with-libsvm " returned error 1
> Command output:
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5309:
> error: 'svm_parameter' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5309:
> error: 'arg2' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5309:
> error: expected primary-expression before ')' token
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5309:
> error: expected `;' before numeric constant
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5323:
> error: expected type-specifier before 'svm_problem'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5323:
> error: expected `>' before 'svm_problem'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5323:
> error: expected `(' before 'svm_problem'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5323:
> error: expected primary-expression before '>' token
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5323:
> error: expected `)' before ';' token
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5328:
> error: expected type-specifier before 'svm_parameter'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5328:
> error: expected `>' before 'svm_parameter'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5328:
> error: expected `(' before 'svm_parameter'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5328:
> error: expected primary-expression before '>' token
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5328:
> error: expected `)' before ';' token
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5329:
> error: expected primary-expression before 'char'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5329:
> error: expected `)' before 'char'
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp: In
> function 'PyObject* _wrap_svm_check_probability_model(PyObject*,
> PyObject*)':
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:5351:
> error: 'svm_check_probability_model' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp: In
> function 'void init_svmc()':
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6670:
> error: 'C_SVC' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6671:
> error: 'NU_SVC' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6672:
> error: 'ONE_CLASS' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6673:
> error: 'EPSILON_SVR' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6674:
> error: 'NU_SVR' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6675:
> error: 'LINEAR' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6676:
> error: 'POLY' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6677:
> error: 'RBF' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6678:
> error: 'SIGMOID' was not declared in this scope
> build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp:6679:
> error: 'PRECOMPUTED' was not declared in this scope
> error: Command "/usr/bin/g++-4.2 -fno-strict-aliasing -fno-common
> -dynamic -DNDEBUG -g -fwrapv -O3 -Wall
> -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/numpy/core/include
> -I/opt/local/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6
> -c build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.cpp -o
> build/temp.macosx-10.6-i386-2.6/build/src.macosx-10.6-i386-2.6/mvpa/clfs/libsvmc/svmc_wrap.o"
> failed with exit status 1
> 
> Error: Status 1 encountered during processing.
> 
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