[pymvpa] Problem with tutorial data
Andrej Schoeke
schoeke at usc.edu
Fri Apr 6 00:26:12 UTC 2012
Ah, my bad. -.-
Maybe it would be better to put that in the prerequisite section or a
reminder right before the tutorial starts.
Also, I could just read more carefully. ;)
Just a sidenote: In the tutorial part of manual pdf
<http://www.pymvpa.org/PyMVPA-Manual.pdf> single quotes are represented
as back ticks. E.g. on page 20:
clf = kNN(k=1, dfx=one_minus_correlation, voting=’majority’)
Andrej
Yaroslav Halchenko wrote:
> yes -- follow
> http://www.pymvpa.org/tutorial.html
> or precisely this:
>
> "to be able to run the code in this tutorial, you need to download the
> corresponding data from the PyMVPA website. Once downloaded, extract the
> tarball, open a terminal, go into the directory with the extracted
> tarball content and run: ./start_tutorial_session.sh."
>
>
> On Thu, 05 Apr 2012, Andrej Schoeke wrote:
>> ➜ data pwd
>> /Library/Python/2.7/site-packages/mvpa2/data
>> ➜ data ls
>> README bold.nii.gz eep.bin
>> glm.mat smpl_attr.txt v73.mat
>> attributes.txt bold_mc.par example4d.nii.gz
>> mask.nii.gz tueb_meg.dat.gz xavr1010.dat
>> attributes_literal.txt bv
>
>> Any idea what went wrong? I changed in python to the install directory,
>> but it seems like it tries to access the data with relatives path which
>> doesn't work very well.
>
> yes -- change to tutorial data's directory, not to install dir with data
> used for testing
>
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