[pymvpa] liblapack.so image not found, OS X

Yaroslav Halchenko debian at onerussian.com
Fri Apr 27 20:44:53 UTC 2012


but did you set manually set svd='dgesvd' for your Procrustean?

if so -- the no surprise ;) but I guess we might want to make such crash
more informative then, e.g. "To use 'dgesvd' implementation of SVD you
must have liblapack.so available"... ?

On Fri, 27 Apr 2012, Kiefer Katovich wrote:

> Reinstalling from source still results in an error, but it is a
> different one. Here is the new traceback:

> File "/Library/Frameworks/EPD64.framework/Versions/7.2/lib/python2.7/site-packages/mvpa2/algorithms/hyperalignment.py",
> line 167, in __call__
>     m.train(ds_new)

>   File "/Library/Frameworks/EPD64.framework/Versions/7.2/lib/python2.7/site-packages/mvpa2/base/learner.py",
> line 119, in train
>     result = self._train(ds)

>   File "/Library/Frameworks/EPD64.framework/Versions/7.2/lib/python2.7/site-packages/mvpa2/mappers/procrustean.py",
> line 184, in _train
>     full_matrices=True, algo='svd')

>   File "/Library/Frameworks/EPD64.framework/Versions/7.2/lib/python2.7/site-packages/mvpa2/support/lapack_svd.py",
> line 68, in svd
>     lapacklib.dgesvd_(byref(jobu), byref(jobv), byref(m), byref(n),

> NameError: global name 'lapacklib' is not defined

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