[pymvpa] Installation problem on MacOSX

Juan Dominguez juan.dominguez at monash.edu
Fri Aug 26 07:06:41 UTC 2016


Hi amigos,

I am trying to install PyMVPA on my macbook pro (OS X 10.9.5) but I'm
having some trouble compiling it. I am getting the following error on the
terminal:

sudo port install py27-pymvpa +scipy +nibabel +hcluster +libsvm +matplotlib
+pywavelet
---> Computing dependencies for py27-pymvpa
---> Building py27-pymvpa
Error: org.macports.build for port py27-pymvpa returned: command execution
failed

--end of error---

Here's also a relevant excerpt from the log file:

:info:build Exit code: 1
:error:build org.macports.build for port py27-pymvpa returned: command
execution failed
:debug:build Error code: CHILDSTATUS 2442 1
:debug:build Backtrace: command execution failed
while executing
"system -nice 0 $fullcmdstring"
("eval" body line 1)
invoked from within
"eval system $notty $nice \$fullcmdstring"
invoked from within
"command_exec build"
(procedure "portbuild::build_main" line 8)
invoked from within
"portbuild::build_main org.macports.build"
("eval" body line 1)
invoked from within
"eval $procedure $targetname"
:info:build Warning: targets not executed for py27-pymvpa:
org.macports.activate org.macports.buildorg.macports.destroot
org.macports.install

--end of excerpt---

I've installed Xcode and command line tools as well as macports. I have
also checked the path in the bash_profile file to be:

export PATH="/opt/local/bin:/opt/local/sbin:$PATH"

I'm using Mavericks and cannot update to El Capitan because I am using a
key application that has no El Capitan update yet.

Your help with this issue is very much appreciated.

Best,

Juan
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