Bug#749859: netcdf: Please increase size of netcdf models for exodus
Sebastiaan Couwenberg
sebastic at xs4all.nl
Sun Nov 8 19:52:55 UTC 2015
notfound 749859 4.2.1+
found 749859 netcdf/1:4.3.3.1+ds-1~exp1
tags 749859 upstream
thanks
Hi Alastair,
On 30-05-14 11:36, Alastair McKinstry wrote:
> The netcdf library must be modified slightly in order to handle the
> exodus datamodel. The specific changes are:
>
> 1. include/netcdf.h -- Modify the following defines:
>
> #define NC_MAX_DIMS 65536 /* max dimensions per file */
> #define NC_MAX_VARS 524288 /* max variables per file */
> #define NC_MAX_VAR_DIMS 8 /* max per variable dimensions */
>
> If these changes are not made, the exodus library will still function
> for "normal" size models, but it will fail for "large" models. The
> error message from exodus/netcdf should be somewhat clear when this
> happens...
As you know, we have NetCDF 4.4.0~rc2 in testing/unstable for some time
now. While that meets the 4.2.1 version requirements, but not the
NC_MAX_* values:
/**
Maximum for classic library.
In the classic netCDF model there are maximum values for the number of
dimensions in the file (\ref NC_MAX_DIMS), the number of global or per
variable attributes (\ref NC_MAX_ATTRS), the number of variables in
the file (\ref NC_MAX_VARS), and the length of a name (\ref
NC_MAX_NAME).
These maximums are enforced by the interface, to facilitate writing
applications and utilities. However, nothing is statically allocated
to these sizes internally.
These maximums are not used for netCDF-4/HDF5 files unless they were
created with the ::NC_CLASSIC_MODEL flag.
As a rule, NC_MAX_VAR_DIMS <= NC_MAX_DIMS.
*/
/**@{*/
#define NC_MAX_DIMS 1024
#define NC_MAX_ATTRS 8192
#define NC_MAX_VARS 8192
#define NC_MAX_NAME 256
#define NC_MAX_VAR_DIMS 1024 /**< max per variable dimensions */
/**@}*/
I'm not comfortable changing these values, because I cannot oversee the
impact.
How common are the "large" models? Is it not a very specialised use case?
Kind Regards,
Bas
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